Small Geographic Distances Research Articles

Species-specific patterns of population genetic structure differ on a microgeographic scale

AbstractCoral exhibits substantial variation in pelagic larval duration, dispersal range, and population connectivity. In this study, we used reduced representation genotyping to compare the genetic structure of Caribbean reef-building species along the southeastern Dominican Republic coastline to assess connectivity within the likely dispersal kernel. Despite relatively small geographic distance between reefs, species-specific differences in genetic structure were observed. The broadcasting coral Orbicella faveolata had high levels of genetic connectivity. Between the two brooding species, Agaricia agaricites showed strong genetic subdivision, while Porites astreoides exhibited high levels of gene flow. These results suggest that multiple factors outside of life history characteristics influence genetic differentiation among populations, with species-level variability underscoring the importance of restoration and management strategies tailored to individual species, considering regional genetic and environmental variability.

Preventing illegal seafood trade using machine-learning assisted microbiome analysis

BackgroundSeafood is increasingly traded worldwide, but its supply chain is particularly prone to frauds. To increase consumer confidence, prevent illegal trade, and provide independent validation for eco-labelling, accurate tools for seafood traceability are needed. Here we show that the use of microbiome profiling (MP) coupled with machine learning (ML) allows precise tracing the origin of Manila clams harvested in areas separated by small geographic distances. The study was designed to represent a real-world scenario. Clams were collected in different seasons across the most important production area in Europe (lagoons along the northern Adriatic coast) to cover the known seasonal variation in microbiome composition for the species. DNA extracted from samples underwent the same depuration process as commercial products (i.e. at least 12 h in open flow systems).ResultsMachine learning-based analysis of microbiome profiles was carried out using two completely independent sets of data (collected at the same locations but in different years), one for training the algorithm, and the other for testing its accuracy and assessing the temporal stability signal. Briefly, gills (GI) and digestive gland (DG) of clams were collected in summer and winter over two different years (i.e. from 2018 to 2020) in one banned area and four farming sites. 16S DNA metabarcoding was performed on clam tissues and the obtained amplicon sequence variants (ASVs) table was used as input for ML MP. The best-predicting performances were obtained using the combined information of GI and DG (consensus analysis), showing a Cohen K-score > 0.95 when the target was the classification of samples collected from the banned area and those harvested at farming sites. Classification of the four different farming areas showed slightly lower accuracy with a 0.76 score.ConclusionsWe show here that MP coupled with ML is an effective tool to trace the origin of shellfish products. The tool is extremely robust against seasonal and inter-annual variability, as well as product depuration, and is ready for implementation in routine assessment to prevent the trade of illegally harvested or mislabeled shellfish.

Intraspecific variation in metabolic responses of a cool water fish to increasing temperatures

Growing impacts of climate change necessitate predicting species’ vulnerability to altered ecosystems. Assessing vulnerability requires understanding how species’ physiology, life history, and ecology vary among populations and can be altered by behavioral, plastic, and evolutionary adaptations. To examine intraspecific variation in sensitivity to climate change, we measured metabolic responses to acute and chronic temperature exposures in three rearing pond populations of walleye ( Sander vitreus), a cool-water-adapted fish species threatened by climate change. We show significant differences among rearing pond populations in response to increasing temperatures which may originate from broodstock, developmental plasticity, and acclimation. Our results indicate northern walleye may be more tolerant of acute and chronic exposure to higher temperatures by being able to maintain a higher aerobic scope than more southern populations. Furthermore, even over small geographic distances, populations can have significantly different physiological responses to environmental stressors. Quantifying variation in population-specific metabolic responses can inform predictions of growth, reproduction, and fitness across a species range and clarify the importance of within-species diversity in determining vulnerability to environmental stressors.

Phylogeographic structuring in a widespread southern African grass snake (Psammophiinae: Psammophylax rhombeatus)

ABSTRACT The structural and environmental heterogeneity within southern Africa has given rise to many morphological forms of Psammophylax rhombeatus distributed throughout the country, with previous studies neglecting the associated molecular significance of these forms. The species’ widespread, generalist ecology coupled with the substantial phylogenetic structuring previously acknowledged within the species, makes P. rhombeatus the ideal candidate for phylogeographic analyses. Using 103 samples, representing the full distribution of the species, phylogenetic analyses retrieved four well-supported clades: south-eastern South Africa, south-western South Africa, north-eastern South Africa and western South Africa. Although not variable enough to warrant taxonomic re-evaluation, the clades are phylogenetically distinguishable, with relatively high intraspecific genetic divergence values separating them, irrespective of the small geographic distances separating populations. This is likely a product of the taxon’s habitat-generalist lifestyle, enabling them to bypass vicariant barriers that might otherwise cause speciation in less versatile species. The clades are also geographically distinct, with little overlap, indicating previous vicariance, a finding that is supported by the split of P. rhombeatus from P. ocellatus in the mid-Pliocene, followed by the diversification of P. rhombeatus into four clades throughout the Pleistocene. The genetic structuring observed in P. rhombeatus may be a product of population expansion following ancient refugial isolation (potentially Last Glacial Maximum). The morphological groupings highlighted in previous studies are loosely attributable to the molecular clades identified in the phylogenetic reconstruction, highlighting the complex interplay of genetic and morphological characteristics in the process of speciation, and their representation in systematic accounts.

Elevational homogenization of mountain parasitoids across six decades.

Elevational gradients are characterized by strong environmental changes within small geographical distances, providing important insights on the response of biological communities to climate change. Mountain biodiversity is particularly sensitive to climate change, given the limited capacity to colonize new areas and the competition from upshifting lowland species. Knowledge on the impact of climate change on mountain insect communities is patchy, but elevation is known to influence parasitic interactions which control insect communities and functions within ecosystems. We analyzed a European dataset of bristle flies, a parasitoid group which regulates insect herbivory in both managed and natural ecosystems. Our dataset spans six decades and multiple elevational bands, and we found marked elevational homogenization in the host specialization of bristle fly species through time. The proportion of specialized parasitoids has increased by ca. 70% at low elevations, from 17 to 29%, and has decreased by ca. 20% at high elevations, from 48 to 37%. As a result, the strong elevational gradient in bristle fly specialization observed in the 1960s has become much flatter over time. As climate warming is predicted to accelerate, the disappearance of specialized parasitoids from high elevations might become even faster. This parasitoid homogenization can reshape the ecological function of mountain insect communities, increasing the risk of herbivory outbreak at high elevations. Our results add to the mounting evidence that symbiotic species might be especially at risk from climate change: Monitoring the effects of these changes is urgently needed to define effective conservation strategies for mountain biodiversity.

Phylogeography and Population Genetics of Rosa chinensis var. spontanea and R. lucidissima Complex, the Important Ancestor of Modern Roses.

Rosa chinensis var. spontanea and R. lucidissima complex are the morphologically very similar key ancestors of modern roses with high importance in rose research and breeding. Although widely distributed in subtropical central and southwestern China, these two taxa are highly endangered. We sampled a total of 221 specimens and 330 DNA samples from 25 populations across the two taxa's whole range. Leaf morphological traits were compared. Two chloroplast DNA intergenic spacers (trnG-trnS, petL-psbE) and ITS were used for population genetics and phylogenetic study to delimit the boundary between the two taxa, assess the genetic variation, uncover the possible evolutionary mechanism responsible for the differentiation within the complex, and make the conservation recommendations. The complex exhibited high levels of genetic variation (hTcpDNA = 0.768, hTITS = 0.726) and high population differentiation even over small geographic distance. We suggest R. chinensis var. spontanea and R. lucidissma be treated as independent taxa, and the northern populations around and within the Sichuan Basin being R. chinensis var. spontanea, having broader leaflets and paler full-blooming flowers, while those in the middle and southern Yunnan-Guizhou Plateau and the adjacent regions being R. lucidissma, having narrower leaflets and darker full-blooming flowers. Transitional areas between the southeastern Sichuan Basin and northeastern Guizhou are the contact or the hybridization zone of the two taxa. Ancestral haplotypes of the complex (R. lucidissma) evolved at about 1.21–0.86 Mya in southeastern Yunnan-Guizhou Plateau and its adjacent regions and survived there during the Quaternary Oscillation. Ancestral haplotypes of R. chinensis var. spontanea deviated from R. lucidissma at about 0.022–0.031 Mya at the transitional areas (Daloushan and Wulingshan Mountains) between the northeastern edge of Yunnan-Guizhou Plaeteau and the southeastern border of Sichuan Basin, where they survived the LGM. The evolution of the complex included spatial isolation and inter-species hybridization. The complex's endangered status might be the result of over-exploitation for its ornamental and medical value, or due to reforestation of some originally open habitats. We provide specific recommendations for the two taxa's in situ and ex situ conservation.

Microgeographical variation in birdsong: Savannah sparrows exhibit microdialects in an island population

Social communication often involves vocal learning, whereby young animals learn their vocalizations early in life by imitating the sounds of adults. In animals that learn their vocalizations, it is common to find patterns of geographical variation known as ‘vocal dialects’, acoustic features shared within a cluster of animals that differ from the vocalizations of animals in nearby clusters. Dialects may form when animals learn their vocalizations early in life and then disperse short distances, or when they modify their vocalizations to match local vocal patterns after dispersal. Dialects are typically studied at a regional or continental scale, but they may also persist at smaller scales in so-called ‘microgeographical song dialects’ or ‘microdialects’. Microdialects have received little research attention. In this study, we investigate microdialects and dispersal distance in song-learning Savannah sparrows, Passerculus sandwichensis, through a 4-year study of birds living on three islands in the Bay of Fundy, Canada. Our analyses yield evidence of microgeographical variation: birds showed higher acoustic similarity to their neighbours than to faraway individuals in the same population. When we classified songs on the basis of their highly variable middle sections, we found that particular song types formed spatial clusters of similar-sounding individuals. Therefore, acoustic variation in Savannah sparrow song appears to show dialects across small geographical distances. In an analysis of dispersal from natal sites to breeding sites, we found a median distance of 189 m, consistent with previous findings. Our results suggest that limited dispersal distances, combined with the social processes of vocal learning (overproduction and selective attrition), likely contribute to the presence of microdialects.

Insights Into the Environmental Impact on Genetic Structure and Larval Dispersal of Crown-of-Thorns Starfish in the South China Sea

The coral-eating crown-of-thorns starfish (COTS; Acanthaster spp.) play a major role in coral reef degradation in the Indo-Pacific region. However, the impacts of environmental factors on the phylogenetic and genetic characteristics of COTS in the northern Indo-Pacific convergence region remains unclear. We used mitochondrial DNA (mtDNA) and microsatellite markers to analyze the phylogenetic relationship, demographic history, genetic diversity and genetic structure of COTS in the South China Sea (SCS) and explored the impact of environmental factors on historical population expansion, genetic differentiation and larval dispersal. There was a clear signature of a population expansion in the SCS using the mtDNA marker. According to microsatellite loci analysis, COTS have high genetic diversity in the SCS. STRUCTURE analysis indicated that COTS in the Pacific Ocean can be divided into four subgroups: the SCS, Western Pacific, Pacific equatorial current affected zone, and Pacific insular atolls populations in the Pacific Ocean. Fst-statistical analysis revealed positive correlations between the Fst values and geographic isolation for all sampling sites. Additionally, there were no clear associations between the Fst values and chlorophyll a concentrations among coral reefs in the SCS; however, there were significant positive associations between the Fst values and particulate organic carbon (POC) concentrations within small geographic distances. These results suggest that COTS underwent historical population expansion after the Last Glacial Maximum, possibly followed by coral population expansion. The genetic structure of COTS populations may have been shaped by distinct nutrient concentrations, particularly those of POC, over small geographic distances. Moreover, ocean currents provide a potential dispersal mechanism for COTS larvae in the SCS. This study demonstrates that environmental and oceanographic factors play important roles in shaping the genetic characteristics and larval dispersal of COTS populations in the northern Indo-Pacific convergence region.

Morphology of four common and phylogenetically distant ant species varies along disturbance and aridity gradients in the Caatinga dry forest

AbstractUnderstanding species adaptations to human‐modified ecosystems is central to evolutionary and conservation biology. It is essential to evaluate trait variations in populations that occur along environmental gradients to understand the adaptive potential of species to human‐driven environmental change. We analyzed morphological trait variations in the workers of four common and phylogenetically distant ant species (Dinoponera quadriceps, Dorymyrmex goeldii, Pheidole radoszkowskii, and Ectatomma muticum) along disturbance and aridity gradients in the Caatinga dry forest. Ants were collected using pitfall traps in 20 0.1‐ha plots distributed over an area of 213.75 km2. Up to five individuals per species were selected from each plot to measure eight morphological traits. Between‐plot variability contributed considerably (~37%) to the total variability of morphological traits. This pattern of high between‐plot variability was consistent across species and traits. Such morphological intraspecific variations between plots were not strongly related to the aridity or disturbance gradients. However, when ant morphology did respond to environmental change, the response was stronger to aridity rather than disturbance, and responses were most conspicuous in P. radoskowskii. Our results suggest that ants in the Caatinga may have substantial potential for morphological adaptation to environmental changes and that disturbance intensity and variations in aridity are not strong determinants of ant worker morphology despite influencing morphological variation over small geographical distances. These morphological variations are likely to represent key assets, by enabling individuals and population to inhabit the variety of habitats provided by Caatinga and to cope with upcoming changes in land use and climate.Abstract in Portuguese is available with online material.

Drivers of black grouse trends in the French Alps: The prevailing contribution of climate

AbstractAimMountains host complex ecosystems whose wide range of ecological conditions over small geographical distances makes them biodiversity hotspots. To ensure their long‐term conservation, a better understanding of the interaction between climate change and modifications in land use is necessary. Most studies have focused on only one of these factors at a time, leading to incomplete predictions. In this study, we explored the relative contribution of both recreative activities and climate change on the population dynamics of the black grouse (Tetraotetrix), an emblematic cold‐adapted species of the Alps.MethodsWe used data from a network of 47 monitoring sites dispersed around the French Alps and surveyed since the 1980s or 1990s. We estimated black grouse population growth rates using state‐space models and tested for effects of biotic and abiotic pressures on both long‐term trends and inter‐annual variations in these rates.ResultsPopulation trajectories were strongly heterogeneous in space; nevertheless, a general decline at the edge of the black grouse distribution area was revealed in the southern pre‐Alps. We found very little influence of hunting and new ski lift cables installation on inter‐annual variability in population growth rate. In contrast, our results suggest strong impact of climatic conditions and phenology. While temperature positively influenced growth rate, precipitation had a negative effect. Early snowmelt and vegetation season were correlated with high positive values of annual population growth rates.Main conclusionsBirds in mountain habitats may be drastically affected by ongoing climate change, perhaps to a greater extent than by an increase in recreational activities. However, other human activities in the mountains (such as animal grazing or forest exploitation) that were not taken into consideration in this study might also have a strong impact on habitat structure and indirectly affect populations’ growth.

Speciation and secondary contact in a fossorial island endemic, the São Tomé caecilian.

A period of isolation in allopatry typically precedes local adaptation and subsequent divergence among lineages. Alternatively, locally adapted phenotypes may arise and persist in the face of gene flow, resulting in strong correlations between ecologically-relevant phenotypic variation and corresponding environmental gradients. Quantifying genetic, ecological, and phenotypic divergence in such lineages can provide insights into the abiotic and biotic mechanisms that structure populations and drive the accumulation of phenotypic and taxonomic diversity. Low-vagility organisms whose distributions span ephemeral geographic barriers present the ideal evolutionary context within which to address these questions. Here, we combine genetic (mtDNA and genome-wide SNPs) and phenotypic data to investigate the divergence history of caecilians (Amphibia: Gymnophiona) endemic to the oceanic island of São Tomé in the Gulf of Guinea archipelago. Consistent with a previous mtDNA study, we find two phenotypically and genetically distinct lineages that occur along a north-to-south axis with extensive admixture in the centre of the island. Demographic modelling supports divergence in allopatry (~300kya) followed by secondary contact (~95kya). Consequently, in contrast to a morphological study that interpreted latitudinal phenotypic variation in these caecilians as a cline within a single widespread species, our analyses suggest a history of allopatric lineage divergence and subsequent hybridization that may have blurred species boundaries. We propose that late Pleistocene volcanic activity favoured allopatric divergence between these lineages with local adaptation to climate maintaining a stable hybrid zone in the centre of São Tomé Island. Our study joins a growing number of systems demonstrating lineage divergence on volcanic islands with stark environmental transitions across small geographic distances.

Accounting for clinal variation and covariation in the assessment of taxonomic limits: why we should remember the ‘rules’

Accounting for clinal variation and covariation in the assessment of taxonomic limits: why we should remember the ‘rules’

Migration routes and habitat use of a highly adaptable salmonid (sea trout, Salmo trutta) in a complex marine area

BackgroundUnderstanding fish movements and migrations are paramount for management and conservation efforts. By applying Hidden Markov Models (HMMs) on records from electronic tags, migration routes of tagged fish can be reconstructed and new insights to the movement ecology of a species can be gained. We demonstrate the usability of HMMs on a widespread, iteroparous salmonid (sea trout, Salmo trutta) in a complex marine area with highly variable temperatures and salinities within small geographic distances. Understanding how the highly adaptable sea trout cope with these complex conditions could shed new light on factors driving the movement ecology of salmonids. Migration tracks of fish migrating at sea are reconstructed by applying an HMM on temperature and depth records from eight wild post-spawned sea trout from four Danish rivers.ResultsThe fish migrated at sea for 47–142 days. Estimated positions of all fish were close to the coast (< 100 km) throughout the marine period, but migrations along coastlines up to 580 km away from the natal river occurred. Seven of eight individuals resided in or actively migrated into stratified or shallow marine areas that heat up fast during spring, while all eight individuals resided in deeper and more heterogeneous areas that heat up slow during summer. All fish entered the Skagerrak (located between Denmark and Norway) at some stage during summer. Migrations were directed into less saline areas during the first 15 days at sea for all individuals. Mean linear progression of the fish was 16 km day−1 (range 0–58 km day−1).ConclusionsThe results corroborate the expectation that sea trout are more coastally orientated than other salmonids, but also suggest that longer migrations occur in the seas surrounding Denmark compared to elsewhere. This could be a consequence of the fish seeking out habitats with optimal conditions (e.g. salinity, temperature, predation and foraging options) for growth in different parts of the year. The coinciding movement from shallow or stratified marine areas that heat up fast during spring to deeper, more well-mixed areas that heat up slow during summer suggested that some habitat selection had occurred. These results shed new light on factors influencing marine migrations in salmonids and demonstrate how HMMs can expand our knowledge on behaviour and movement ecology of marine fishes.

Ysurnames? The patrilineal Y-chromosome and surname correlation for DNA kinship research

The Y-chromosome is a widely studied and useful small part of the genome providing different applications for interdisciplinary research. In many (Western) societies, the Y-chromosome and surnames are paternally co-inherited, suggesting a corresponding Y-haplotype for every namesake. While it has already been observed that this correlation may be disrupted by a false-paternity event, adoption, anonymous sperm donor or the co-founding of surnames, extensive information on the strength of the surname match frequency (SMF) with the Y-chromosome remains rather unknown. For the first time in Belgium and the Netherlands, we were able to study this correlation using 2,401 males genotyped for 46 Y-STRs and 183 Y-SNPs. The SMF was observed to be dependent on the number of Y-STRs analyzed, their mutation rates and the number of Y-STR differences allowed for a kinship. For a perfect match, the Yfiler® Plus and our in-house YForGen kit gave a similar high SMF of 98%, but for non-perfect matches, the latter could overall be identified as the best kit. The SMF generally increased due to less mismatches when encountering [1] deep Y-subhaplogroups, [2] less frequently occurring surnames, and [3] small geographical distances between relatives. This novel information enabled the design of a surname prediction model based on genetic and geographical distances of a kinship. The prediction model has an area under the curve (AUC) of 0.9 and is therefore useable for DNA kinship priority listing in estimation applications like forensic familial searching.

Cooperative caching and delivery algorithm based on content access patterns at network edge

Mobile network performance and user Quality of Experience have been negatively affected by the explosion of mobile data traffic. This paper proposes mobile edge caching to alleviate the problem. Recent research has focused on local caching at the wireless edge, as motivated by the 80/20 rule regarding content popularity. By caching popular contents at base stations (BSs) closer to users, backhaul congestion and content access latency can be dramatically reduced. To address the limited storage size of BSs in the context of the massive amount of available content, an algorithm optimizing cooperative caching has been highlighted. Contents requested by mobile users that cannot be obtained locally could be transferred by cooperative BSs. In this paper, we propose a cooperative caching algorithm based on BS content access patterns. We use tensor decompositions with distance constraint to analyze interaction between users, contents and base stations. Thus, BSs with small geographical distances and similar content access patterns constitute a cooperative caching domain. The distributed content placement and delivery algorithm is optimized based on simultaneous consideration of the caching hit ratio and cooperative cost. Simulation results based on a real dataset of usage detail records demonstrate the superior performance and promising practical gains in caching of the proposed caching method compared to user clustering and BS clustering.

Population genetic analysis reveals a predominantly selfing mating system and strong genetic structuring in a naturally fragmented, threatened plant

Conservation genetics studies not only provide information about genetic diversity and genetic structure to inform conservation strategies, they can also help infer life history characteristics such as mating system, pollinator, and seed dispersal strategy of a plant species. Here, we investigated Geocarpon (Mononeuria minima; Caryophyllaceae), an extremely diminutive, poorly known plant species from the south-central U.S. that is threatened due to high habitat specificity and habitat loss. The goals of this study were to use genetic data to help understand the basic attributes of the biology of Geocarpon, including mating system and the spatial extent of gene flow, how genetic variation is partitioned within and among populations and across the landscape, and how to protect that genetic variation. Most Geocarpon populations are highly homozygous and genetically homogenous, indicating a predominantly selfing mating system. Although the species maintains some allelic diversity, the majority of genetic variation was partitioned among populations, even in groups separated by small geographic distances (≥ 0.5 km), indicating very localized seed dispersal (gravity or water). Because genetic variation is structured at a fine scale, to conserve the full range of genetic diversity it is necessary to protect a large proportion of the populations of the species; we recommend protection of as many currently unprotected sites as possible, particularly in areas of the geographic range where few populations are protected, combined with ex situ conservation seed banking in sites that cannot be protected. This study illustrates how life history characteristics, particularly mating system, strongly influence patterns of genetic structure and can have major effects on the strategy to conserve genetic variation in an endangered species.

Small-scale phenotypic differentiation along complex stream gradients in a non-native amphipod

BackgroundSelective landscapes in rivers are made up by an array of selective forces that vary from source to downstream regions or between seasons, and local/temporal variation in fitness maxima can result in gradual spatio-temporal variation of phenotypic traits. This study aimed at establishing freshwater amphipods as future model organisms to study adaptive phenotypic diversification (evolutionary divergence and/or adaptive plasticity) along stream gradients.MethodsWe collected Gammarus roeselii from 16 sampling sites in the Rhine catchment during two consecutive seasons (summer and winter). Altogether, we dissected n = 1648 individuals and quantified key parameters related to morphological and life-history diversification, including naturally selected (e.g., gill surface areas) as well as primarily sexually selected traits (e.g., male antennae). Acknowledging the complexity of selective regimes in streams and the interrelated nature of selection factors, we assessed several abiotic (e.g., temperature, flow velocity) and biotic ecological parameters (e.g., conspecific densities, sex ratios) and condensed them into four principal components (PCs).ResultsGeneralized least squares models revealed pronounced phenotypic differentiation in most of the traits investigated herein, and components of the stream gradient (PCs) explained parts of the observed differences. Depending on the trait under investigation, phenotypic differentiation could be ascribed to variation in abiotic conditions, anthropogenic disturbance (influx of thermally polluted water), or population parameters. For example, female fecundity showed altitudinal variation and decreased with increasing conspecific densities, while sexual dimorphism in the length of male antennae—used for mate finding and assessment—increased with increasing population densities and towards female-biased sex ratios.ConclusionsWe provide a comprehensive protocol for comparative analyses of intraspecific variation in life history traits in amphipods. Whether the observed phenotypic differentiation over small geographical distances reflects evolutionary divergence or plasticity (or both) remains to be investigated in future studies. Independent of the mechanisms involved, variation in several traits is likely to have consequences for ecosystem functions. For example, leaf-shredding in G. roeselii strongly depends on body size, which varied in dependence of several ecological parameters.

Aggregation and negative interactions in low-diversity and unsaturated monogenean (Platyhelminthes) communities in Astyanax aeneus (Teleostei) populations in a neotropical river of Mexico.

We studied monogenean communities of 11 populations of Astyanax aeneus (Günther) separated by small geographical distances along 60 km of the Lacantún river in Chiapas, Mexico, in February and August 2012. We found 12 monogenean taxa. Amongst these, five species specialist for Astyanax were widely distributed regionally, constituting 90% of the total collected monogeneans, with one of these species dominating most component communities. The high similarities in terms of composition between the component communities (SJaccard > 60%) as well as in terms of the abundance and composition between infracommunities (SBray Curtis > 40%), provide empirical evidence that transmission, both between hosts at the same location and between component communities, is high and effective. No resemblance pattern was detected between locations in terms of their spatial distribution. The composition of these communities was spatially and temporally consistent over the two very different weather periods sampled. These communities were not saturated. Our analysis suggests that the potential richness of the infracommunities is proportional to the number of monogenean species available in the component community. We found aggregation in the populations and between monogenean species. Intraspecific aggregation is density dependent, suggesting that intraspecific competition for space is not a limiting factor for the development of the population. We evaluated the associations for each species pair and detected 77% negative interactions (134/177 associations), suggesting that interspecific competition plays an important role in shaping these communities. The negative correlations of abundance between pairs of species contributes to confirmation of competition. Intraspecific aggregation increased relative to interspecific aggregation with richness in the component community, facilitating coexistence of the species. Our results suggest that these are interactive communities, where monogeneans disperse efficiently from a common source, colonize patches (hosts) together, and compete with other species even at low population densities. Finally, the coexistence of these species is favored by the unpredictable recruitment and aggregated use of fragmented resources.

Spatial genetics of a high elevation lineage of Rhytididae land snails in New Zealand: the Powelliphanta Kawatiri complex

ABSTRACTPowelliphanta is a genus of large carnivorous land snails endemic to New Zealand which display phenotypic variation within comparatively small geographic distances. The diversity within these snails has become a matter of high interest to conservation, as many lineages occupy small (or highly fragmented) ranges that render them vulnerable to ongoing habitat loss and predation by exotic pests. Combining Powelliphanta mitochondrial sequence data and genotypes of microsatellite loci we document the genetic structure within a species complex dubbed ‘Kawatiri’. All populations (with one exception) within the Kawatiri lineage are restricted to subalpine habitat (at elevations over 600 m above sea level). The ranges of some Kawatiri complex populations are adjacent to the congeneric lowland species Powelliphanta lignaria. Improved understanding of the distribution of this complex and the level and structure of genetic diversity provided a picture of a naturally fragmented lineage, restricted to a particular ecological zone. We identified six genetic clusters associated with population connectivity orientated north–south along mountain ranges, with east–west divisions between ranges. Future management should aim to retain the evolutionary potential within this young radiation by actively conserving the variation encompassed by each of the six clusters identified here.

The role of knowledge-intense high-impact firms in city innovation systems

Past studies on city innovation systems acknowledge the important role of firms, but rarely study them explicitly. This paper shifts attention to the firm level, and proposes that knowledge-intensive high-impact firms are especially important in shaping the economic development of local economies by creating industry-specific micro pathways. This argument follows from their central role in city innovation systems: we propose that knowledge-intense high-impact firms (KIHIFs) have a relatively high absorptive capacity and therefore make better use of knowledge spillover, but also play a role in distributing international knowledge spillover in return. To empirically investigate this thesis, we examine firms operating in the computer-programming activities, and engineering and technical consultancy industries in the capital area surrounding Helsinki, Finland. In line with our theoretical arguments, we find that the relative within-industry concentrations and rates of internationalisation of KIHIFs vary greatly over small geographic distances. Future research and implications for policy-makers are discussed.