Counting of droppings is often, with great effect, used as an indirect method to monitor the appearance and usage of an area by a population covering longer time spans. However, manual detecting and counting of droppings can be time-consuming and tedious, and with a risk of resulting in course estimations. In this context, we studied the use of imaging from unmanned aerial vehicles (UAVs) as a novel and enhanced tool to estimate the dropping densities and distributions of field foraging Arctic migratory geese, such as pink-footed goose Anser brachyrhynchus and barnacle goose Branta leucopsis. Aided by analysis in geographical information systems (GIS), we sought to detect and use fine-scale changes in the within-field dropping densities to evaluate avoidance distance to selected landscape elements. Data in the form of aerial photos from farmed grassland and pastures were collected in areas adjacent to Limfjorden, Northern Jutland, Denmark. The UAV proved usable for detecting droppings from field foraging geese, but with the applied UAV technology only at a low flying altitude (≤3 m), which rendered traditional methods for georeferencing inapplicable. A revised protocol for georeferencing of single aerial photos triggered from low altitudes was successfully developed, which was considered suitable for future use. Analyses based on the performed UAV data sampling allowed for an unprecedented fine-scale estimation of distribution patterns of the goose droppings and further for determination of optimal sampling frequencies (≤12 × 12 m spacing between photo samples) for calculation of density patterns, which reflected differences in foraging activity of geese across whole fields. Contagious dispersions in dropping densities were detected in the majority of fields indicating local, within-field displacements of the geese, which were illustrated by interpolated heatmaps. Additionally, avoidance distances were assessed for four landscape elements and detected with consistent results for windbreaks (100 m), roads (175 m) and wind turbines (1100 m) throughout the ten surveyed fields.