We decided to investigate the effect of the Cys270-Cys297 disulfide bond on catalytic site integrity of Pseudomonas aeruginosa elastase in its native state. We compared dynamical behaviour of the active site of this enzyme in the native and disulfide bond broken states by performing short timescale molecular dynamics simulations. Our results reveal that the disulfide bond involves in regulating of amplitude of fluctuations of functionally important residues and in tuning of their Φ and ψ dihedral angles values. Furthermore, the presence of this disulfide bond participates in the adjustment of the correlation of motions and the distance between pairs of active site residues. Docking simulation studies reveal that the breakage of the disulfide bond can cause significant reduction in affinity of the active site for HIP as an inhibitor molecule. These results can provide new insights into the utilization of disulfide bonds to design more efficient enzymes in the future.
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