Daya Bay, a semi-enclosed bay in the northern South China Sea and to the east of the Pearl River Estuary, is rich in biological resources and diverse habitats. Current research on mesozooplankton in Daya Bay has mainly focused on aspects such as species composition, biomass, and biodiversity in the zooplankton community. However, there is limited research on the top-down effects of mesozooplankton on prey communities. This study conducted seasonal in-situ cultivation experiments from 2015 to 2017. By combining mesozooplankton grazing experiments and microzooplankton dilution experiments, the mesozooplankton clearance rate and trophic cascading effect on low trophic levels were calculated. Results showed evident mesozooplankton selective feeding behavior and corresponding trophic cascades with seasonal variations, these being significantly higher in the spring and summer and lower in the autumn and winter. Different sizes of phytoplankton showed significant differences; large-sized phytoplankton received high feeding rates but low trophic cascades by mesozooplankton, while the opposite was true for small-sized phytoplankton. Trophic cascades contribute in three ways: offsetting direct grazing mortality, changing prey community structure via its effects on different phytoplankton sizes, and reducing ciliate grazing impacts at an average of 14.4 ± 7.8%, maintaining around 70% ciliate grazing impacts in nature. The composition of mesozooplankton was the primary reason for explaining feeding preferences, including size selectivity and omnivory. For instance, high cladoceran abundance caused high feeding rates while, on the other hand, high omnivorous copepods abundance caused high trophic cascades on small-sized phytoplankton. General additive model (GAM) analysis revealed that the changes in trophic cascades were highly dependent on temperature, ciliate abundance, mesozooplankton feeding rates on ciliates, and ciliate feeding rates on phytoplankton. The significance of this study lies in its contribution to providing valuable insights into the role of mesozooplankton in the marine food web and their impact on lower trophic levels. In addition, the findings can help inform the management and conservation of marine ecosystems, as well as guide future research in this field.
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