Increase In Seed Size Research Articles

On the origin of giant seeds: the macroevolution of the double coconut (Lodoicea maldivica) and its relatives (Borasseae, Arecaceae).

Summary Seed size shapes plant evolution and ecosystems, and may be driven by plant size and architecture, dispersers, habitat and insularity. How these factors influence the evolution of giant seeds is unclear, as are the rate of evolution and the biogeographical consequences of giant seeds.We generated DNA and seed size data for the palm tribe Borasseae (Arecaceae) and its relatives, which show a wide diversity in seed size and include the double coconut (Lodoicea maldivica), the largest seed in the world. We inferred their phylogeny, dispersal history and rates of change in seed size, and evaluated the possible influence of plant size, inflorescence branching, habitat and insularity on these changes.Large seeds were involved in 10 oceanic dispersals. Following theoretical predictions, we found that: taller plants with fewer‐branched inflorescences produced larger seeds; seed size tended to evolve faster on islands (except Madagascar); and seeds of shade‐loving Borasseae tended to be larger.Plant size and inflorescence branching may constrain seed size in Borasseae and their relatives. The possible roles of insularity, habitat and dispersers are difficult to disentangle. Evolutionary contingencies better explain the gigantism of the double coconut than unusually high rates of seed size increase.

Deciphering the transcriptional regulatory networks that control size, color, and oil content in Brassica rapa seeds

BackgroundBrassica rapa is an important oilseed and vegetable crop species and is the A subgenome donor of two important oilseed Brassica crops, Brassica napus and Brassica juncea. Although seed size (SZ), seed color (SC), and oil content (OC) substantially affect seed yield and quality, the mechanisms regulating these traits in Brassica crops remain unclear.ResultsWe collected seeds from a pair of B. rapa accessions with significantly different SZ, SC, and OC at seven seed developmental stages (every 7 days from 7 to 49 days after pollination), and identified 28,954 differentially expressed genes (DEGs) from seven pairwise comparisons between accessions at each developmental stage. K-means clustering identified a group of cell cycle-related genes closely connected to variation in SZ of B. rapa. A weighted correlation analysis using the WGCNA package in R revealed two important co-expression modules comprising genes whose expression was positively correlated with SZ increase and negatively correlated with seed yellowness, respectively. Upregulated expression of cell cycle-related genes in one module was important for the G2/M cell cycle transition, and the transcription factor Bra.A05TSO1 seemed to positively stimulate the expression of two CYCB1;2 genes to promote seed development. In the second module, a conserved complex regulated by the transcription factor TT8 appear to determine SC through downregulation of TT8 and its target genes TT3, TT18, and ANR. In the third module, WRI1 and FUS3 were conserved to increase the seed OC, and Bra.A03GRF5 was revealed as a key transcription factor on lipid biosynthesis. Further, upregulation of genes involved in triacylglycerol biosynthesis and storage in the seed oil body may increase OC. We further validated the accuracy of the transcriptome data by quantitative real-time PCR of 15 DEGs. Finally, we used our results to construct detailed models to clarify the regulatory mechanisms underlying variations in SZ, SC, and OC in B. rapa.ConclusionsThis study provides insight into the regulatory mechanisms underlying the variations of SZ, SC, and OC in plants based on transcriptome comparison. The findings hold great promise for improving seed yield, quality and OC through genetic engineering of critical genes in future molecular breeding.

Tolerance to seed predation mediated by seed size increases at lower latitudes in a Mediterranean oak.

The ability of plants to allocate energy to resistance against herbivores changes with abiotic conditions and thus may vary along geographical clines, with important consequences for plant communities. Seed size is a plant trait potentially influencing plant tolerance to endoparasites, and seed size often varies across latitude. Consequently, plant tolerance to endoparasites may change across geographical clines. The interaction between Quercus ilex (holm oak) and seed-predating Curculio spp. (weevils) was explored along most of the latitudinal range of Q. ilex. This included quantification of variation in seed size, survival likelihood of infested seeds, multi-infestation of acorns and community composition of Curculio weevils in acorns. Larger seeds had a higher probability of surviving weevil attack (i.e. embryo not predated). Southern populations of oak produced on average four times larger seeds than those of northern populations. Consequently, the probability of survival of infested acorns decreased with latitude. The community composition of Curculio varied, with large weevils (C. elephas) dominating in southern populations and small weevils (C. glandium) dominating in northern populations. However, damage tolerance was robust against this turnover in predator functional traits. Furthermore, we did not detect any change in multi-infestation of acorns along the geographical gradient. Quercus ilex tolerance to seed predation by Curculio weevils increases toward the southern end of its distribution. Generally, studies on geographical variation in plant defence against enemies largely ignore seed attributes or they focus on seed physical barriers. Thus, this research suggests another dimension in which geographical trends in plant defences should be considered, i.e. geographical variation in tolerance to seed predators mediated by seed size.

Seed bank, seed size and dispersal in moisture gradients of temporary pools in Southern France

Plants reduce risk of extinction due to unpredictable rainfall by soil seed banks, dispersal or large seeds. However, seed size also increases independently in dry habitats, and since seed size is in a trade-off with seed number, size of seed banks is expected to increase in moister habitats. Therefore, we wanted to test if seed abundance in soil increases in wet habitats, if seed size increases in dry habitats, and if spread of seeds along the gradient is higher for plants of intermediate habitats in local moisture gradients.We studied 15 temporary pools in three biogeographically separated wetlands in Southern France. For each pool we studied five different moisture levels, totalling 75 local plant communities. We quantified soil seed bank by the seedling emergence method, seed size and an index of spatial spread of seeds in the soil for every species. We also quantified water levels for each plot.We found increasing abundance of seeds in the soil with increasing water levels but lower seed size and higher spread at intermediate water levels. When we controlled for niche position, we found no trade-off between seed size, spread and abundance in the soil seed bank.Type and importance of risk reduction strategies thus appeared to be strongly driven by the plant species’ moisture niche and the spatial arrangement of water levels.

Activation of CYCD7;1 in the central cell and early endosperm overcomes cell-cycle arrest in the Arabidopsis female gametophyte, and promotes early endosperm and embryo development.

SummaryIn angiosperms, double fertilization of the egg and central cell of the megagametophyte leads to the development of the embryo and endosperm, respectively. Control of cell cycle progression in the megagametophyte is essential for successful fertilization and development. Central cell‐targeted expression of the D‐type cyclin CYCD7;1 (endCYCD7;1) using the imprinted FWA promoter overcomes cycle arrest of the central cell in the Arabidopsis female gametophyte in the unfertilized ovule, leading to multinucleate central cells at high frequency. Unlike FERTILIZATION‐INDEPENDENT SEED (fis) mutants, but similar to lethal RETINOBLASTOMA‐RELATED (rbr) mutants, no seed coat development is triggered. Unlike the case with loss of rbr, post‐fertilization endCYCD7;1 in the endosperm enhances the number of nuclei during syncytial endosperm development and induces the partial abortion of developing seeds, associated with the enhanced size of the surviving seeds. The frequency of lethality was less than the frequency of multinucleate central cells, indicating that these aspects are not causally linked. These larger seeds contain larger embryos composed of more cells of wild‐type size, surrounded by a seed coat composed of more cells. Seedlings arising from these larger seeds displayed faster seedling establishment and early growth. Similarly, two different embryo‐lethal mutants also conferred enlarged seed size in surviving siblings, consistent with seed size increase being a general response to sibling lethality, although the cellular mechanisms were found to be distinct. Our data suggest that tight control of CYCD activity in the central cell and in the developing endosperm is required for optimal seed formation.

The repeated evolution of large seeds on islands.

Several plant traits are known to evolve in predictable ways on islands. For example, herbaceous species often evolve to become woody and species frequently evolve larger leaves, regardless of growth form. However, our understanding of how seed sizes might evolve on islands lags far behind other plant traits. Here, we conduct the first test for macroevolutionary patterns of seed size on islands. We tested for differences in seed size between 40 island-mainland taxonomic pairings from four island groups surrounding New Zealand. Seed size data were collected in the field and then augmented by published seed descriptions to produce a more comprehensive dataset. Seed sizes of insular plants were consistently larger than mainland relatives, even after accounting for differences in growth form, dispersal mode and evolutionary history. Selection may favour seed size increases on islands to reduce dispersibility, as long-distance dispersal may result in propagule mortality at sea. Alternatively, larger seeds tend to generate larger seedlings, which are more likely to establish and outcompete neighbours. Our results indicate there is a general tendency for the evolution of large seeds on islands, but the mechanisms responsible for this evolutionary pathway have yet to be fully resolved.

Comparison of the Pattern of Crop Domestication between Two Asian Beans, Azuki Bean (Vigna angularis) and Rice Bean (V. umbellata)

Azuki bean (Vigna angularis) and rice bean (V. umbellata) are locally important legumes that were domesticated in Asia. They are genetically closely related and therefore suitable for comparative genomics studies. The center of genetic diversity of azuki bean is in East Asia and it was most probably domesticated in Japan based on the archaeobotanical and genetic evidences. The center of genetic diversity and domestication of rice bean is in Southeast Asia. The domestication of rice bean involved fewer gene (QTLs) mutations with larger genetic effects than azuki bean. The distribution of major domestication genes in rice bean is limited to two linkage groups compared with five in azuki bean. In azuki bean the major domestication genes are abundantly detected on linkage group 9 (LG9), while in rice bean they were found on LG4. Surprisingly, many species specific QTLs were detected such as azuki bean’s erect stem QTL on LG9 and rice bean’s seed size increase QTL on LG4. Such species specific QTLs suggest the possibility that rice bean and azuki bean can provide novel genes for breeding. Comparative genomics among closely related species is an efficient way to find novel genes for breeding.

DNA Methylation Causes Predominant Maternal Controls of Plant Embryo Growth

The parental conflict hypothesis predicts that the mother inhibits embryo growth counteracting growth enhancement by the father. In plants the DNA methyltransferase MET1 is a central regulator of parentally imprinted genes that affect seed growth. However the relation between the role of MET1 in imprinting and its control of seed size has remained unclear. Here we combine cytological, genetic and statistical analyses to study the effect of MET1 on seed growth. We show that the loss of MET1 during male gametogenesis causes a reduction of seed size, presumably linked to silencing of the paternal allele of growth enhancers in the endosperm, which nurtures the embryo. However, we find no evidence for a similar role of MET1 during female gametogenesis. Rather, the reduction of MET1 dosage in the maternal somatic tissues causes seed size increase. MET1 inhibits seed growth by restricting cell division and elongation in the maternal integuments that surround the seed. Our data demonstrate new controls of seed growth linked to the mode of reproduction typical of flowering plants. We conclude that the regulation of embryo growth by MET1 results from a combination of predominant maternal controls, and that DNA methylation maintained by MET1 does not orchestrate a parental conflict.

Contrasting patterns in crop domestication and domestication rates: recent archaeobotanical insights from the Old World.

BackgroundArchaeobotany, the study of plant remains from sites of ancient human activity, provides data for studying the initial evolution of domesticated plants. An important background to this is defining the domestication syndrome, those traits by which domesticated plants differ from wild relatives. These traits include features that have been selected under the conditions of cultivation. From archaeological remains the easiest traits to study are seed size and in cereal crops the loss of natural seed dispersal.ScopeThe rate at which these features evolved and the ordering in which they evolved can now be documented for a few crops of Asia and Africa. This paper explores this in einkorn wheat (Triticum monococcum) and barley (Hordeum vulgare) from the Near East, rice (Oryza sativa) from China, mung (Vigna radiata) and urd (Vigna mungo) beans from India, and pearl millet (Pennisetum glaucum) from west Africa. Brief reference is made to similar data on lentils (Lens culinaris), peas (Pisum sativum), soybean (Glycine max) and adzuki bean (Vigna angularis). Available quantitative data from archaeological finds are compiled to explore changes with domestication. The disjunction in cereals between seed size increase and dispersal is explored, and rates at which these features evolved are estimated from archaeobotanical data. Contrasts between crops, especially between cereals and pulses, are examined.ConclusionsThese data suggest that in domesticated grasses, changes in grain size and shape evolved prior to non-shattering ears or panicles. Initial grain size increases may have evolved during the first centuries of cultivation, within perhaps 500–1000 years. Non-shattering infructescences were much slower, becoming fixed about 1000–2000 years later. This suggests a need to reconsider the role of sickle harvesting in domestication. Pulses, by contrast, do not show evidence for seed size increase in relation to the earliest cultivation, and seed size increase may be delayed by 2000–4000 years. This implies that conditions that were sufficient to select for larger seed size in Poaceae were not sufficient in Fabaceae. It is proposed that animal-drawn ploughs (or ards) provided the selection pressure for larger seeds in legumes. This implies different thresholds of selective pressure, for example in relation to differing seed ontogenetics and underlying genetic architecture in these families. Pearl millet (Pennisetum glaucum) may show some similarities to the pulses in terms of a lag-time before truly larger-grained forms evolved.

Nucleation and growth of ZnO nanorods on the ZnO-coated seed surface by solution chemical method

ZnO nanorods on ZnO-coated seed surfaces were fabricated by solution chemical method using supersaturated (ZnNO 3) 2/NaOH at 70 °C. The seed surfaces were coated on glass substrates by sol–gel processing, and their texture was dominated by heating temperatures, cooling styles and layer thickness per dipping. The effects of the seed surface on the morphology of the resultant nanorods were primarily discussed. The orientation and morphology of both the seed surface and successive nanorods were analyzed by using XRD and SEM. It is proved that when the seed size increases from 15 to 50 nm with temperature increasing, the average diameter of the resultant nanorods increase from 25 to 50 nm, with a length of 800 nm after growing for 1.5 h. The seed surface prepared by heating at 300–400 °C, fast cooling or drawing at lower speed has better orientation and few surface defects, which leads to higher density of nuclei on the seed surface and thus to the optimal preferred crystal growth of ZnO rods standing perpendicular onto substrates.

Influence of seed size on dispersal patterns of woolly monkeys (Lagothrix lagothricha) at Tinigua Park, Colombia

Seed size in tropical forests is expected to vary in relation to dispersal mode, recruitment requirements and the nature of seed enemies in each community. Some studies have emphasized an advantage of large‐seeded species in environments subject to low rates of disturbance, but at the same time the number of dispersers tends to decrease as seed size increases. In this paper we describe how seed size affects the probabilities of seed dispersal by woolly monkeys at Tinigua National Park and we compare dispersal patterns among age/sex classes. The results are based on 1236 fecal samples recovered from focal individuals during two years. Woolly monkeys are able to swallow wide seeds; however, there seems to be a limit imposed by anatomical constraints that does not allow them to swallow seeds wider than 18 mm. Most of the seed mass dispersed by the monkeys falls in the categories between 6 and 12 mm wide. Seed selection in terms of mass was not observed for small‐seeded species, but it was observed for some of the medium sized species (without any clear size preference) and there was a clear tendency to swallow relatively small seeds from the large‐seeded species. Although we did not observe a difference in the number of seeds dispersed by deposition among age/sex classes, juveniles disperse a lower seed mass than adult animals. These differences highlight that different age/sex categories play distinct ecological roles in terms of seed dispersal processes. Seed selection by primates might impose selection pressures in seed size traits, but more studies are necessary to ascertain their potential evolutionary role.

Seed polymerization of tetraethyl orthosilicate in the presence of colloidal silica spheres

Kinetic analyses were made for the seed polymerization of tetraethyl orthosilicate (TEOS) in the presence of colloidal silica sphere seeds by turbidity and dynamic light scattering (DLS) measurements. Transmission electron microscopy (TEM) of the spheres formed was also used. TEOS is polymerized exclusively on the surfaces of the seed spheres, their sizes ranging from 29 to 184 nm in diameter. The sphere size versus time and the cube root of the absorbance versus time from DLS and turbidity measurements agree well, especially in the beginning of the reaction. The seed polymerization starts immediately on the addition of seed spheres, though the polymerization in the absence of the seeds proceeds after a certain induction time ranging several tens of seconds to several minutes. The polymerization rates of the reaction increase when the size and/or the concentration of the seed spheres increases. The thickness of the TEOS layers formed on the seed surfaces increases as the seed size increases; this is confirmed by the TEM pictures. These results are consistent with the polymerization mechanism of the formation of small preliminary particles followed by their coalescence on the surfaces of seeds to the final large spheres coated with silica layers.

Removal Rates of Seeds of Five Myrmecochorous Plants by the Ant Formica polyctena (Hymenoptera: Formicidae)

Attractiveness of five deciduous forest myrmecochorous and diplochorous plants for Formica polyctena ants were studied in field experiments. Seeds of different plant species were removed at different rates (RRS) by ants. Experiments with demonstrations of seeds of one or a pair of species and with partly cut elaiosomata or seed bodies showed that seed attractiveness increased with seed size increase in Viola matutina, Chelidonium majus, V. mirabilis, V. hirta and Asarum europaeum, and was weakly correlated with elaiosome size. The exponential character of RRS from groups was especially pronounced for pure myrmecochors. The RRS obtained for F. polyctena near (5 m) were about ten times shorter than those obtained far (15 m) from the nests. Ants taking seeds of A. europaeum, V. hirta and V. mirabilis were significantly larger than ants taking Ch. majus. It is suggested, that in habitats with colonies of F. polyctena with a prevalence of small individuals, the small-seed myrmecochors receive some advantages in seed dispersal, and in habitats with colonies with a prevalence of large size classes - the large-seed myrmecochors have an advantage.

A model for seed size variation among plants

I developed a model for seed size variation among plants assuming that the pollen captured per flower depends on both the allocation to pollen capture mechanisms per flower and the number of flowers on each plant. I showed that the optimal seed size increases with (1) the total resource allocation to reproduction, (2) decreasing outcross pollen availability, (3) decreasing probability of seedling establishment and (4) decreasing selfing rate. However, optimal seed size does not depend on the total resource allocation if the total number of pollen grains captured by a plant increases linearly with its flower number. In addition, the optimal seed size is not always positively correlated with the optimal resource allocation to pollen capture mechanisms per flower. I discussed implications of the results for seasonal decline in seed size and seed size variations among populations, such as alutitudinal variation.