Seed Cd Concentration Research Articles

Association between bacterial community and cadmium distribution across Colombian cacao crops.

Cadmium (Cd) content in cacao crops is an issue that generates interest due to the commercialization of chocolate for human consumption. Several studies provided evidence about the non-biological factors involved in its translocation into the cacao plant. However, factors related to this process, including soil bacterial community composition (SBCC), still need to be addressed. It is well known that soil microbiome could impact compounds' chemical transformation, including Cd, on the field. Here, we found the first evidence of the link between soil bacterial community composition and Cd concentration in cacao soils and seeds. It highlights the importance of including the variation of bacterial communities to assess the factors driving the Cd translocation into cacao seeds. Moreover, the results highlight the relevance of the spatial heterogeneity within and across cacao farms, influencing the variability of Cd concentrations.

Clay-hydrochar composites return to cadmium contaminated paddy soil: Reduced Cd accumulation in rice seed and affected soil microbiome

Excess cadmium (Cd) in rice precipitated by Cd contamination in paddy soils is a global human health threat and rational response is urgently needed. In this study, attapulgite-modified hydrochar (CA) and the montmorillonite-modified hydrochar (CM) were utilized in Cd-contaminated paddy soils at 0.5% (w/w) and 1% (w/w) application rates to investigate the effects of these clay-hydrochar composites on rice growth and soil Cd availability. The results show that the utility of CA and CM resulted in a significant increase in rice yield, especially at 1% application rate, which extended rice yield by 46.7–50.0% compared to 0.5% application rate. This is related to the Cd fixation and nutrient sequestration of the acidic functional groups on the surface of CA and CM. Additionally, CA-1% and CM-1% reduced the Cd concentration in rice seeds by 26.9–28.1% relative to the control. Notably, CA-1% showed the capacity to passivate Cd at the early stage of rice transplanting, lowering the proportion of Cd in the ion exchange state by 41.6% compared to the control, and this passivation effect persisted until the late stage of transplanted rice. The soil microbial community consequences showed that CA and CM did not significantly change the horizontal composition of the soil bacterial phylum and species diversity, indicating that CA and CM had excessive soil microbial adaptability. Moreover, results of correlation and Canonical Correspondence Analysis confirm that microbial genera responded significantly to the soil Cd morphologies, revealing the importance of CA and CM in the remediation of Cd-contaminated soils by influencing microorganisms. Our findings provide clay-hydrochar composites as a low-cost approach to effectively mitigate soil Cd contamination and improve the security and quality of rice.

Assessment of elevated CO2 concentrations and heat stress episodes in soybean cultivars growing in heavy metal polluted soils: Crop nutritional quality and food safety

The present study evaluated the interactive effects of global change and heavy metals on the growth and development of three soybean [Glycine max (L.) Merrill] cultivars and the consequences on yield and food safety. Soybean cultivars (Alim 3.14 from Argentina, and ES Mentor and Sigalia, from Germany) were grown until maturity in heavy metals polluted soils from the Rhine Valley, Germany, at two CO2 concentrations (400 and 550 ppm) and heat stress (HS) episodes (9 days with 10 °C higher than maximum regular temperature) during the critical growth period in controlled environmental chambers. Different morpho-physiological parameters, heavy metal concentration in aerial organs, seed quality parameters, and toxicological index were recorded. The results showed that no morphological differences were observed related to CO2. Moreover, Alim 3.14 showed the highest yield under control conditions, but it was more sensitive to climatic conditions than the German cultivars, especially to heat stress which strongly reduces the biomass of the fruits. Heavy metals concentration in soil exceeds the legislation limits for agricultural soils for Cd and Pb, with 1.6 and 487 mg kg−1 respectively. In all cultivars, soybeans accumulated Cd in its aerial organs, and it could be translocated to fruits. Cd concentration in seeds ranged between 0.6 and 2.4 mg kg−1, which exceed legislation limits and with toxicological risk to potential Chinese consumers. Pb levels were lower than Cd in seeds (0.03–0.17 mg kg−1), and the accumulation were concentrated in the vegetative organs, with 93% of the Pb incorporated. Moreover, pods accumulated 11 times more Pb than seeds, which suggests that they act as a barrier to the passage of Pb to their offspring. These results evidence that soybean can easily translocate Cd, but not Pb, to reproductive organs. No regular patterns were observed in relation to climatic influence on heavy metal uptake.

Does sulfur application continue to reduce cadmium accumulation and increase the seed yield of oilseed rape (Brassica napus L.) at the maturity stage?

Oilseed rape requires sulfur (S) fertilization. Cadmium (Cd) differs dramatically in agricultural soils. Rice-oilseed rape rotation distributes widely and contributes the majority of rapeseeds in Asian countries. It was reported that S metabolism was involved in Cd uptake in seedlings of oilseed rape, although the effects of S on Cd accumulation and seed yield at maturity are still unclear. We performed a pot experiment including two Cd rates (0.35 and 10.35 mg kg-1 , as low and high Cd soil) and four S levels (0, 30, 60 and 120 mg kg-1 ). The results showed that low S application (30 mg kg-1 ) resulted in two-fold higher seed-Cd concentration irrespective of soil Cd levels. The responsible mechanism might be that Cd translocation into rapeseeds was involved in sulfate transporters, which could be strongly expressed in shoots and roots when supplying sulfate under S-starvation conditions, but depressed under a S-sufficient environment. For high Cd soil, seed yield decreased by 36%, 48% and 72% at 30, 60 and 120 mg S kg-1 compared to non-S treatment, whereas there were no differences for low Cd soil. Antagonistic effects of S and Cd existed for seed yield according to structure equation model analysis. Oilseed rape can be grown in low-Cd fields as a safe food crop with high levels of sulfur fertilizers (>60 mg S kg-1 ). In high-Cd fields, oilseed rape is recommended as a Cd-remediation crop, and rapeseeds should only be used for industrial purposes and not for food. © 2021 Society of Chemical Industry.

Microbial Consortium of PGPR, Rhizobia and Arbuscular Mycorrhizal Fungus Makes Pea Mutant SGECdt Comparable with Indian Mustard in Cadmium Tolerance and Accumulation.

Cadmium (Cd) is one of the most widespread and toxic soil pollutants that inhibits plant growth and microbial activity. Polluted soils can be remediated using plants that either accumulate metals (phytoextraction) or convert them to biologically inaccessible forms (phytostabilization). The phytoremediation potential of a symbiotic system comprising the Cd-tolerant pea (Pisum sativum L.) mutant SGECdt and selected Cd-tolerant microorganisms, such as plant growth-promoting rhizobacterium Variovorax paradoxus 5C-2, nodule bacterium Rhizobium leguminosarum bv. viciae RCAM1066, and arbuscular mycorrhizal fungus Glomus sp. 1Fo, was evaluated in comparison with wild-type pea SGE and the Cd-accumulating plant Indian mustard (Brassica juncea L. Czern.) VIR263. Plants were grown in pots in sterilized uncontaminated or Cd-supplemented (15 mg Cd kg−1) soil and inoculated or not with the microbial consortium. Cadmium significantly inhibited growth of uninoculated and particularly inoculated SGE plants, but had no effect on SGECdt and decreased shoot biomass of B. juncea. Inoculation with the microbial consortium more than doubled pea biomass (both genotypes) irrespective of Cd contamination, but had little effect on B. juncea biomass. Cadmium decreased nodule number and acetylene reduction activity of SGE by 5.6 and 10.8 times, whereas this decrease in SGECdt was 2.1 and 2.8 times only, and the frequency of mycorrhizal structures decreased only in SGE roots. Inoculation decreased shoot Cd concentration and increased seed Cd concentration of both pea genotypes, but had little effect on Cd concentration of B. juncea. Inoculation also significantly increased concentration and/or accumulation of nutrients (Ca, Fe, K, Mg, Mn, N, P, S, and Zn) by Cd-treated pea plants, particularly by the SGECdt mutant. Shoot Cd concentration of SGECdt was twice that of SGE, and the inoculated SGECdt had approximately similar Cd accumulation capacity as compared with B. juncea. Thus, plant–microbe systems based on Cd-tolerant micro-symbionts and plant genotypes offer considerable opportunities to increase plant HM tolerance and accumulation.

Patterns of cadmium uptake and accumulation by exclusion and inclusion soybean cultivars

AbstractIn the areas where the soils are polluted by cadmium (Cd), farmers cannot afford to use their lands for remediation due to high demand for soybean (Glycine max L.) production. In order to provide information for safe soybean production and achieve the phytoremediation using the root at the meantime, four soybean cultivars (mentioned as Cd excluder and Cd includer) differing in seed Cd accumulation were grown in a mixed growing media treated with different Cd concentrations (0 and 0.35 mg kg−1) in a growth cabinet. The biomass and Cd concentration in roots, stems, leaves, pods, and seeds were measured at the beginning of seed development (R5) and maturity (R8) stages; accumulation coefficient and translocation coefficient of Cd in different organs were calculated. Cadmium concentration in seeds was positively correlated with the Cd concentration in stem, leaf, and pod. Cadmium concentration in the roots of the Cd excluder was significantly higher than that in the Cd includer at the R5 and R8 stages; however, the Cd concentration in the seeds of the Cd includer was higher than that in the Cd excluder. Compared with the Cd excluder, more Cd was transported from the root to the aboveground organs of Cd includer. This suggests that Cd excluder with high cadmium accumulation in the root and low accumulation in the seed could provide a possible way to develop Cd‐safe cultivars with high phytoremediation capacity when grown on Cd‐polluted lands.

Migration and transformation of cadmium in rice - soil under different nitrogen sources in polymetallic sulfide mining areas

We conducted pot experiments to assess the bioavailability of cadmium (Cd) in contaminated rhizosphere soil and accumulation in rice organs in response to nitrogen (N) supply ((NH4)2SO4, NH4NO3, NH4Cl). The results showed that the concentration of bioavailable Cd in rice rhizosphere soil was (NH4)2SO4 treatment > NH4Cl treatment > NH4NO3 treatment at the same level of N application and growth period; the Cd concentration in rice roots was (NH4)2SO4 treatment > NH4NO3 treatment > NH4Cl treatment; and the Cd concentration in rice straw was NH4NO3 treatment > NH4Cl. The Cd concentration in rice roots, straws, and seeds at the maturity stage was (NH4)2SO4 treatment > NH4Cl treatment. With the same N fertilizer, excessive N promoted Cd accumulation in rice at later growth stages. This suggested that sulfate (SO42−) influenced Cd concentration in rice. NH4Cl application maintained a low Cd level in different rice organs with the same N level. This confirmed that NH4Cl is a safe N source for rice planting in polymetallic sulfide mining areas. The study concludes that appropriate NH4Cl levels for Cd-contaminated paddy soil with high-S-content could obtain rice grains with Cd concentrations below the food safety standards (0.2 or 0.4 mg·kg−1).

Using Data Mining to Predict the Concentration of Cadmium in Khuzestan Paddies, Iran

Background: Rice is the second highly consumed foodstuff among Iranian people. However, high levels of cadmium (Cd) are reported in some paddy fields in Khuzestan province, Iran. Objectives: The current study aimed at investigating the Cd concentration in rice grains by the decision tree using J48 algorithm. The current study also used WEKA software to implement the algorithm. Methods: A total of 630 samples (9 attributes in 70 sampling areas) were taken from each paddy field (5 regions); hence, seed and soil samples were analyzed according to the standard laboratory procedures and finally, the data mining technique was used for the classification of trees by J48 algorithm to predict the concentration of Cd in rice seed. Results: The results showed that the average concentrations of Cd in rice seed and soil were 81.4 and 273.6 μg/kg, respectively; it was also shown that J48 gives 95.71% accuracy, 0.899 Kappa coefficient, and less error (RMSE = 0.179), which make a good predictive model. A significant correlation was observed between soil characteristics and the concentration of Cd in rice seeds. Conclusions: The data mining technology can be used to predicate Cd concentration in rice seeds, and also J48 algorithm is a simple designer to construct a decision tree; nevertheless, offers good results in experiments.

Effect of liming using a partial mixing technique on reductions in the seed cadmium levels for soybeans (Glycine max (L.) Merr.) under field conditions

ABSTRACTTo reduce the availability of soil cadmium (Cd) to soybeans (Glycine max (L.) Merr.), we employed a liming by partial mixing (PM) technique in two drained paddy fields on Gray Lowland soils, which had 0.1 mol L–1 hydrochloric acid-extractable Cd concentrations as high as 1.08 and 1.40 mg kg–1. Among the different application methods tested, PM application (PM2) using a width of 20 cm and a depth of 20 cm was found to be most appropriate for reducing the seed Cd concentration and to obtain the optimum yield at Site A. Under PM2, a liming rate of 38% of that for broadcast incorporated into the surface 15 cm layer (Bc) was suitable to reduce the seed Cd concentration at Site A, whereas the lime rate with PM2 was set at 50% of that for Bc (PM2-50) at Site B due to the higher availability of soil Cd. The root system was limited within the range of lime and fertilizer application for PM2 as well as PM2-50; thus, the lime and fertilizer were supplied successfully to the rooting zone. The soil pH value was lower under PM2 at Site A and PM2-50 at Site B compared with Bc, whereas the seed Cd concentration was lower for PM2 and PM2-50. This may be explained by the intensive uptake of calcium and magnesium with PM2 as well as PM2-50. The seed Cd concentration in the cultivar “Ryuhou” at the target pH of 6.5 was approximately 30% lower with PM2-50 than Bc at Site B. In addition, the average seed Cd concentrations in one cultivar and two lines, characterized by the lower Cd uptake with higher retention in roots and higher accumulation in leaves, were approximately 40% lower compared with “Ryuhou.” Thus, the combination of liming with PM2-50 at the target pH of 6.5 and a low-Cd cultivar (or lines) minimized the seed Cd concentration. The highest seed Cd concentration was found in the first year of soybean cultivation, which was considered to be caused by the release of Cd from organic nitrogen compounds during the nitrogen mineralization process.

Effects of drought on cadmium accumulation in peanuts grown in a contaminated calcareous soil.

This study aimed to investigate the effects of drought stress on cadmium (Cd) accumulation in peanut (Arachis hypogaea L.) grown in contaminated calcareous soils. Five peanut cultivars were grown in a calcareous soil spiked with 4 mg Cd kg(-1) soil (dry weight) under well-watered, mild drought, and severe drought conditions. The biomass production, gas exchange, spectral reflectance, and Cd accumulation in plant tissues were determined. The five cultivars significantly differed from each other in biomass production, gas exchange, spectral reflectance, and Cd accumulation. The effect of drought on Cd accumulation in peanuts varies with plant tissues, cultivars, and developmental stages. Drought decreased root Cd concentrations in seedlings of the two high Cd-accumulating cultivars (Haihua 1 and Zhenghong 3), which is associated with increasing leaf active Fe content. However, for the mature plants, drought stress caused an increase in Cd accumulation in roots, pod walls, and seeds depending on peanut cultivars. Negative correlations were found between seed Cd concentration and biomasses in both preflowering seedlings and mature plants. The seed Cd concentration in mature plants was also observed to be positively correlated with the shoot Cd concentration in preflowering seedlings. The increased Cd concentration in seeds of drought-stressed peanut plants grown in Cd-contaminated calcareous soils might be attributed to the drought-induced decrease of biomass production.

Relationship between biomass, seed components and seed Cd concentration in various peanut (Arachis hypogaea L.) cultivars grown on Cd-contaminated soils

Peanuts (Arachis hypogaea L.) exhibit high genotypic variations in seed Cd accumulation, but the mechanism remains unclear. This study aimed to reveal the main factors that determine Cd concentration in peanut seeds. The biomasses and Cd accumulation in plant tissues as well as the Cd distribution in the seeds of 15 peanut cultivars were analyzed in a pot experiment at 4mgkg−1 Cd (treatment) and 0mgkg−1 Cd (control). Peanuts exhibited large variations among cultivars in terms of Cd accumulation and distribution at the whole-plant and seed levels. The peanut cultivars were divided into three groups based on [Cd]embryos as follows: (i) high Cd accumulators (Zhenghong 3 and Haihua 1), (ii) low Cd accumulators (Qishan 208, Luhua 8, and Yuhua 15), and (iii) intermediate Cd accumulators (10 remaining cultivars). [Cd]embryos was significantly correlated with [Cd]testae and [Cd]oils at control conditions, whereas in the 4mgkg−1 Cd treatment, [Cd]embryos was negatively correlated with plant biomass, total Cd and its proportion in vegetative organs, and seed oil contents. [Cd]embryos was positively correlated with protein contents, [Cd]oils, and proportion of Cd in protein extracts at 4mgkg−1 Cd treatments. The attenuation of Cd by high biomass of vegetative tissues and Cd-binding proteins in seeds mainly determined the Cd concentration in peanut seeds.

Cadmium Treatment Alters the Expression of Five Genes at theCda1Locus in Two Soybean Cultivars [Glycine Max(L.) Merr

Westag 97 has larger capacity of Cd accumulation in roots which prevents Cd from translocating into stems and leaves; conversely, AC Hime has smaller capacity of Cd accumulation in roots; more Cd is transported into stems and leaves. The different capacity of Cd in roots between Westag 97 and AC Hime causes the different Cd concentration in seeds. Meanwhile, according to the different expression levels of RSTK, ISCP, and H+-ATPase between Westag 97 and AC Hime, RSTK may be involved in transporting Cd into stems and leaves; H+-ATPase may be correlated to the capacity of Cd accumulation in roots; and Cd caused some changes of fundamental life process which leaded to the different expression patterns of ISCP between Westag 97 and AC Hime.

Groundwater Level Effect on Redox Potential, on Cadmium Uptake and Yield of Soybean

In this greenhouse experiment, we investigated the effects of two constant groundwater levels: 10 cm groundwater level (GW-10) and 40 cm groundwater level (GW-40) and one change groundwater level, which was 40-10-40 cm (GW-40-10-40) on Cadmium (Cd) uptake and seed yield of Soybean plant in Cd contaminated soils (1.57 mg·kg-1). The experimental soil layer was made with gravel layer (14 cm), non-polluted soil (15 cm) and polluted soil (25 cm). The redox potential of every soil layer was measured from sowing to harvesting. The soil layer (10 – 40 cm) of GW-10 was always in reduction condition and that of GW-40 was always in oxidation condition. First 50 days of GW 40-10-40 were in oxidation and next 50 days in reduction and final 20 days again returned in oxidation condition. Soybean seed Cd concentration was significantly highest in GW-40-10-40 (1.16 ± 0.13 mg·kg-1) and lowest in GW-40 (0.81 ± 0.12 mg·kg-1). Cd concentration of stem was found significantly higher in GW-40 (1.7 ± 0.2 mg·kg-1) than GW-10 (0.91 ± 0.08 mg·kg-1) and GW-40-10-40 (1.28 ± 0.13 mg·kg-1). There was no significant difference in root Cd concentration among these 3 treatments. Main stem height of soybean plant and 100 seed weight of GW-40 were significantly higher than those of GW-10. The result revealed that, soil redox condition is an important factor for Cd uptake in soybean plant and seed yield of soybean. This study will help to manage the farming process more appropriately with the aim of minimizing uptake of Cd and other toxic metals in grain crops.

The effect of rate and Cd concentration of repeated phosphate fertilizer applications on seed Cd concentration varies with crop type and environment

Limited information is available on how cadmium (Cd) applied in phosphate fertilizer interacts with soil and environmental conditions over time to affect crop Cd concentrations. Field studies from 2002 to 2009 at seven locations evaluated the cumulative effects of P fertilizer rate and Cd concentration on seed Cd concentration of durum wheat (Triticum turgidum L.) and flax (Linum usitatissiumum L.). Soil characteristics and environment affected Cd availability. Durum wheat grain Cd increased with P fertilizer rate but effect on flaxseed Cd concentration was smaller. Cadmium concentration in fertilizer had a greater effect on flaxseed than durum wheat Cd concentration. Seed Cd concentration of both crops was greatest with the highest rate P fertilizer containing the highest Cd concentration. There was not a strong cumulative effect of fertilization over the 8 years of the study, indicating attenuation of Cd availability over time. Cadmium in phosphate fertilizer increases Cd available for crop uptake, but crop Cd concentration is also affected by soil characteristics and annual environmental conditions. Type of crop produced and soil and environmental characteristics that affect phytoavailability must be taken into account when assessing the Cd risk from P fertilization.

Peanut as a potential crop for bioenergy production via Cd-phytoextraction: A life-cycle pot experiment

The current study aimed to assess the potential of peanut (Arachis hypogaea L.) for bioenergy production via phytoextraction in cadmium (Cd) -contaminated soils and screen appropriate cultivars for this approach. A life-cycle pot experiment was conducted to determine the biomass, seed yield, oil content and Cd accumulation of seven peanut cultivars under Cd concentration gradients of 0, 2, and 4 mg kg−1. Peanut exhibits genotypic variations in Cd tolerance, seed production, oil content, and Cd accumulation. Exposure of plants to 2 and 4 mg kg−1 Cd did not inhibit shoot biomass, seed yield, and oil content for most of the cultivars tested. There are large amounts of Cd accumulated in the shoots. Although the seed Cd concentration of peanut was relatively high, the Cd concentration in seed oils was very low (0.04-0.08 mg kg−1). Among the cultivars, Qishan 208 showed significant Cd tolerance, high shoot biomass, high pod and seed yield, high seed oil content, considerable shoot Cd concentration, and the largest translocation factor and total Cd in shoots. The cultivation of peanut in Cd-contaminated farmland was confirmed to be feasible for bioenergy production via phytoextraction, and Qishan 208 is a good candidate for this approach.

Single-Base Substitution in P1B-ATPase Gene Is Associated with a Major QTL for Seed Cadmium Concentration in Soybean

Cadmium (Cd) is a pollutant metal present in soils and toxic to biologic organisms. Previous studies using recombinant inbred lines derived from a cross between soybean (Glycine max [L.] Merr.) cultivars Harosoy and Fukuyutaka revealed a major quantitative trait loci for seed Cd concentration (cd1) in chromosome 9. The genome sequence of Williams 82 suggested that a P(1B)-ATPase gene involved in the transport of metals was located in the vicinity of cd1. cDNA sequencing suggested existence of two types of transcripts: one (GmHMA1a) consisting of 9 exons and 8 introns and the other (GmHMA1b) consisting of 8 exons and 7 introns. The putative polypeptide, GmHMA1a, consisted of 885 amino acids, whereas premature termination of translation of GmHMA1b generated a putative polypeptide with 559 amino acids. GmHMA1a had a 49.8% similarity with AtHMA3, a P(1B)-ATPase of Arabidopsis. GmHMA1a of Fukuyutaka differed from that of Harosoy by a single-base substitution that led to an amino acid substitution from E to G at amino acid position 608. A derived cleaved amplified polymorphic sequence (dCAPS) marker was developed to detect the base substitution, and this dCAPS marker was successfully associated with seed Cd concentration. Transgenic experiments may be necessary to verify that GmHMA1 actually corresponds to cd1.

Developing of a simple method for screening soybean seedling cadmium accumulation to select soybean genotypes with low seed cadmium

Significant inter-cultivar differences of soybean seed cadmium (Cd) concentrations arise from the inter-cultivar differences in root Cd accumulation ability. The Cd concentration in the shoots of plants at the vegetative stage is already controlled by the roots Cd concentration in the same way that it determines seed Cd concentration. Based on these results we conjectured that there is no need to wait until the full maturity stage because the inter-cultivar difference in seed Cd concentration can be predicted from the Cd concentration in the shoots of seedlings. To test this theory, we cultivated 150 cultivars/lines to the harvest stage in a field not contaminated with Cd and measured seed Cd concentration. We also planted seeds in pots filled with contaminated soil, cultivated them for 3 weeks, and measured the Cd concentration of the seedling obtained at the 5th-node (V5) stage when the 4th trifoliolate leaf had expanded. The 150 cultivars/lines were roughly divided into 2 groups based on the relationship between these 2 Cd concentrations. One group was cultivars in which seedlings and seeds both had low Cd concentrations (low Cd accumulation group, n = 129), and the other group was the opposite (high Cd accumulation group, n = 21). Further, when we predicted seed Cd concentration using the ratio of Cd and Zn concentrations in seedlings, we were able to clearly divide the 2 groups with no overlap. Measuring Cd/Zn in seedlings therefore makes it possible to select cultivars with low Cd accumulation tendency readily, without waiting to harvest the seeds. Additionally, by investigating genealogies we found that varieties in the high-Cd accumulation group were descended from certain cultivars such as Harosoy.

A Major QTL Controlling Seed Cadmium Accumulation in Soybean

ABSTRACTCadmium (Cd) is a pollutant heavy metal that is naturally present in soils and highly toxic to biological organism even at low concentrations. Significant differences were observed among soybean [Glycine max (L.) Merr.] cultivars in the uptake of Cd by root and its posterior translocation to the shoot and grain. The aim of this research was to identify quantitative trait loci (QTLs) for seed Cd concentration in soybean. A single population derived from a cross between the cultivars Harosoy and Fukuyutaka, which differ in seed Cd levels, were used for QTL analysis. The population consisted of 93 F5:6 recombinant inbred lines (RILs), 93 F6:7 RILs, 93 F7:8 RILs, and 100 F6:7 near‐isogenic lines (NILs). A total of 220 simple sequence repeat (SSR) markers were genetically mapped on the 93 F5:6 RILs population and clustered into 22 molecular linkage groups (MLGs) which covered a genetic distance of approximately 2400 centimorgans (cM). Analysis revealed one major QTL (cd1) on Chromosome 9 (MLG K) associated with seed Cd concentration. The cd1 was stable across years–generations and accounted for 82, 57, and 75% of the genetic variation in the RILs populations tested in the field. Effect of cd1 was verified by means of a NIL population developed from the F5:6 RILs. The followup survey results indicated that the novel SSR markers Gm09: 4770663 and Gm09: 4790483 assigned to MLG K seemed to be suitable markers for selecting genotypes with low seed Cd concentration in soybean.

Abstracts of Nippon Dojo-Hiryogaku Zasshi

Abstracts of Nippon Dojo-Hiryogaku Zasshi

Mapping and validation of simple sequence repeat markers linked to a major gene controlling seed cadmium accumulation in soybean [Glycine max (L.) Merr

Daily consumption of cadmium (Cd) contaminated foods poses a risk to human health. Cultivar selection is an important method to limit Cd uptake and accumulation; however, analyzing grain Cd concentration is costly and time-consuming. Developing markers for low Cd accumulation will facilitate marker assisted selection (MAS). Inheritance studies using a threshold value of 0.2 mg kg(-1) for low and high and an F(2:3) population showed that low Cd accumulation in soybean seed is under the control of a major gene (Cda1, proposed name) with the allele for low accumulation being dominant. A recombinant inbred line (RIL) population (F(6:8)) derived from the cross AC Hime (high Cd accumulation) and Westag-97 (low Cd accumulation) was used to identify the DNA markers linked to Cda gene(s) or quantitative trait loci (QTLs) controlling low Cd accumulation. We screened 171 simple sequence repeat (SSR) primers that showed polymorphism between parents on the 166 RILs. Of these, 40 primers were newly developed from the soybean genomic DNA sequence. Seven SSR markers, SatK138, SatK139, SatK140 (0.5 cM), SatK147, SacK149, SaatK150 and SattK152 (0.3 cM), were linked to Cda1 in soybean seed. All the linked markers were mapped to the same linkage group (LG) K. The closest flanking SSR markers linked to Cda1 were validated using a parallel population (RILs) involving Leo x Westag-97. Linked markers were also validated with diverse soybean genotypes differing in their seed Cd concentration and showed that SSR markers SatK147, SacK149, and SattK152 clearly differentiated the high and low Cd accumulating genotypes tested. To treat Cd uptake as a quantitative trait, QTL analysis using a linkage map constructed with 161 markers identified a major QTL associated with low Cd concentration in the seeds. The QTL was also mapped to the same location as Cda1 on LG-K. This QTL accounted for 57.3% of the phenotypic variation. Potential candidate genes (genes with known or predicted function that could influence the seed Cd concentration) like protein kinase, putative Adagio-like protein, and plasma membrane H(+)-ATPase were found to be located in the locus of interest. Of the four SSR markers located in the region, SattK152 was localized in the plasma membrane H(+)-ATPase gene. SSR markers closely linked to Cda1 in seeds of soybean were identified and have potential to be used for MAS to develop low Cd accumulating cultivars in a breeding program.