Sediment Community Oxygen Consumption Research Articles

Bioturbation and faunal-mediated ecosystem functioning in a deep-sea benthic community recovering from a severe seabed disturbance

Kaikōura Canyon, offshore Aotearoa/New Zealand, is a hotspot for deep-sea benthic biology with globally high faunal abundance. The Mw7.8 Kaikōura earthquake in 2016 triggered a severe disturbance that reshaped the canyon, evacuating an estimated 850 metric megatonnes of sedimentary material down canyon. The Kaikōura Canyon habitat is now recovering from this removal of both seafloor substrate and associated organisms.We measured post-event benthic macrofauna density together with biomass and sediment properties and related these to infaunal bioturbation activity, sediment community oxygen consumption (SCOC) and associated benthic macronutrient biogeochemical fluxes. Three legacy sites were used as reference along a depth transect of the canyon axis at 917, 1249, and 1480 m water depths. We found distinct differences in benthic functioning between sites.While many parameters measured followed the expected relationships of decreasing with depth some benthic biological activity metrics did not. Our data suggests that the sites differ based on the relative impact and type of disturbance experienced during the earthquake-triggered, canyon-flushing event. We find SCOC was linked to bioturbatory behaviour and sediment organic matter content, rather than taxa density or biomass. While the greatest bioturbation activity was measured at the shallowest site, the greatest SCOC was measured at the middle depth site due to elevated sediment organic matter content.These observations provide a wider benchmark for infaunal bioturbation and faunal-mediated biogeochemical processes in deep-sea canyon environments and provide rare insights of recovery trajectories for deep-sea benthic communities and ecosystem function after large seafloor disturbances.

Ocean acidification and warming modify stimulatory benthos effects on sediment functioning: An experimental study on two ecosystem engineers

Many macrofauna have a stimulatory effect on sediment functioning through their burrowing, feeding and irrigation activities. Here, we investigated the single and combined effect of ocean acidification and warming on the stimulatory effect of two key-species inhabiting sandy seabeds in the Southern Bight of the North Sea; the bivalve Abra alba and the polychaete Lanice conchilega. The species were separately incubated in natural sediment in the laboratory under ambient, low pH (pH: -0.3), warm (T: + 3°C) and mimicked climate change (pH: -0.3, T: +3°C) conditions. After six weeks of incubation, nutrient and oxygen exchange were measured at the sediment-water interface to estimate aerobic sediment metabolism and nitrogen cycling. Both species facilitate sediment community oxygen consumption, nitrification and denitrification under ambient conditions. The stimulatory effect of A. alba disappeared in a low pH environment and decreased over time in the warmer treatments along with increased mortality. In contrast, L. conchilega stimulated sediment biogeochemical cycling more when seawater becomes acidified (+ 8 to 41%, depending on the function) but warming had no effect. We explain these species-specific climate change effects by different behavioral and physiological coping strategies that cascade on to sediment biogeochemical cycling, especially through altered oxygenation the sediment matrix.

Decadal Time‐Series Depletion of Dissolved Oxygen at Abyssal Depths in the Northeast Pacific

AbstractDissolved oxygen depletion in the global ocean is well documented over several decades from the surface ocean to abyssal depths. This decline is especially prevalent in the Northeast Pacific. A significant decline in dissolved oxygen has been measured over 30 years at 4,000–4,100 m depth (Station M) beneath the California Current off central California. Three principal hypotheses examined the relationship of declining oxygen with biological and physical factors over the 30‐year time series. Annual resolution revealed Ekman pumping, coastal upwelling, particulate matter flux, and sediment community oxygen consumption having significant correlations with bottom water dissolved oxygen concentration. Coastal upwelling accounted for 65% of the annual variation in bottom water oxygen concentration. Stepwise regression yielded descriptive models of bottom water dissolved oxygen using coastal upwelling, wind stress and primary production variables. Is continued oxygen depletion in the Northeast Pacific indicative of abyssal regions in the world ocean?

Abyssal Benthic Rover, an autonomous vehicle for long-term monitoring of deep-ocean processes.

The deep-ocean carbon cycle is poorly quantified. An abyssal benthic rover was developed to make long time-series measurements of seafloor processes related to organic carbon remineralization and sequestration. Benthic Rover II (BR-II) is an autonomous dual-tracked vehicle that measures bottom water temperature and oxygen concentration, current velocity, and sediment community oxygen consumption (SCOC; respiration). BR-II is programmed to transit with low surface-contact pressure across the seafloor, photograph bottom conditions, and stop regularly to occupy respirometer incubation sites, with deployment periods up to 1 year. Now, continuously operational at a 4000-m station in the northeast Pacific over 5 years, substantial weekly, seasonal, annual, and episodic events have been recorded, which are critical to assessing the deep-ocean carbon cycle. There was a significant increase in phytodetritus cover (P < 0.01) arriving on the seafloor from the overlying water column between 2015 and 2020 that was negatively correlated with bottom water dissolved oxygen concentration (P < 0.01). Over the continuous 5-year monitoring period from November 2015 to November 2020, SCOC was positively correlated with phytodetritus cover (P < 0.01) and increased significantly from 2015 to 2020 (P < 0.01). These results show important influences of biological processes on the carbon cycle. The demonstrated success of BR-II now creates opportunities to expand the long-term monitoring of the deep sea to resolve the coupling of water column and benthic processes key to understanding the oceanic carbon cycle on a planet engulfed in a changing climate.

Response of sediment-dwelling bivalves to microplastics and its potential implications for benthic processes

Sediments are considered an ultimate sink for microplastic (MPs) but knowledge on MPs impacts on the benthic organisms is still limited. A microcosm experiment was performed to assess the effect of MPs on two sediment-dwelling bivalve species that differ in terms of their life¬styles and feeding behaviors (the cockle Cerastoderma glaucum and the Baltic clam Limecola balthica). Fitness of both bivalves, their vertical distribution in the sediment and activity at the sediment-water interface were studied following addition of PE microspheres of three different size fractions (63–75, 150–180 and 250–300 μm) in two concentrations (0.1 and 0.5% sediment dwt) to the sediment surface. Bivalve survival was generally high and did not vary significantly among treatments. Both bivalve species captured MPs but no significant effect on their body conditions and energy reserves was observed. However, some behavioural alterations were found. The near-surface-dwelling C. glaucum emerged from the sediment less often and in lower numbers suggesting lower activity in sediments amended with large and medium MPs served in higher concentration. Also vertical distribution of deeper-dwelling L. balthica differed among treatments. The clam penetrated deeper sediment layers in microcosms treated with MPs than in the control (on average 62% of the total number of bivalves found in the sediment layer 2–4 cm vs. 65% in the upper 2 cm) which may suggest an avoidance behaviour or escape reaction in response to MPs addition to the topmost sediment. Total sediment community oxygen consumption was significantly higher in MPs-amended sediments than in the control, with the highest rates in treatment with the largest microspheres. However, oxygen uptake increase seemed to be unrelated to addition of MPs per se, suggesting rather an interaction between MPs and bivalves. The need for future studies on MPs effects on benthic community structure and functioning is highlighted.

Seasonal variability in ecosystem functioning across estuarine gradients: The role of sediment communities and ecosystem processes

Functional trait approaches advance the understanding of biodiversity–ecosystem function (BDEF) relationships and its control by the environmental context. Application of these insights into management remains constrained due to lack of evidence from real-world ecosystems that capture the natural spatial and temporal gradients at which biodiversity and environmental conditions operate. In this study we measured macrofauna community traits, ecosystem processes and abiotic properties at 9 locations during 4 months, spanning a wide gradient in sedimentary habitats and salinity in the Scheldt estuary, and quantified the (a)biotic contribution to sediment community oxygen consumption, as a measure of ecosystem function. We found that functional attributes of the macrofauna community and its effect on bio-irrigation can predict ecosystem function, but especially during the colder period of the year. This result highlights that generalizations about BDEF relationships, and biodiversity loss on ecosystem functions, are limited whenever this temporal component is not acknowledged.

Temporally-resolved mechanisms of deep-ocean particle flux and impact on the seafloor carbon cycle in the northeast Pacific

High-temporal-resolution views of particle flux to the abyssal benthic boundary layer are provided for an eight-month period (October 2014–June 2015) at the long-term monitoring site Station M within the California Current ecosystem. Contributions of fecal pellets and aggregates to particulate organic carbon (POC) flux at 3900 m depth were estimated based on optical sediment trap (Sedimentation Event Sensor) images captured as a time-series of 2 h collections. POC flux estimated from Sedimentation Event Sensor (SES) images explained variation in carbon consumption and the carbon budget balance (supply – demand) with finer resolution than POC flux measurements from bulk collections by a concurrently deployed conventional sediment trap. Indicators of particle transport by benthic boundary layer currents and active transport by zooplankton were evaluated by comparing SES-estimated POC flux to measured current speed and direction, hours since solar noon, and modeled lunar illumination at the surface. Influence of particles (fecal pellets and aggregates) on the carbon budget was evaluated by comparing particle-specific contributions to POC flux with sediment community oxygen consumption (SCOC) measured by the Benthic Rover at 4000 m depth. During the eight-month sampling period, salp fecal pellets delivered an estimated 45% of the total POC flux to the benthic boundary layer and were responsible for an estimated 74% of a temporary carbon surplus in May and June 2015. Salp fecal pellets also appeared to be the primary source of chlorophyll peaks at the site. By contrast, most aggregates appeared to be lower-quality particles possibly sourced from lateral advection and local rebound of recently-settled detritus, which settled according to spring-neap tidal oscillations. Some aggregates may have been fresher, as suggested by non-linear relationships with SCOC and the carbon budget balance. Results suggest sinking particles packaged in surface waters and reaching abyssal depths in fresh condition (e.g. salp fecal pellets) had a greater influence on carbon consumption (e.g. SCOC) and the carbon budget balance than more refractory particles.

Model study of organic carbon attenuation and oxygen mass transfer in persistent aggregate layers in the deep sea

A time series study from 1989 to 2017 indicates that, increasingly, carbon export to abyssal sediments in the California Current Ecosystem (CCE), 220 km west of the central California coast (Sta. M), occurs as rapidly sinking pulses of particulate organic carbon (POC). Nearly continuous sediment trap collections confirm that POC export to 3400 m increased significantly after 2011 with carbon attenuation (as fraction of POC remineralized) ranging from a low of 57% to a high of 77% during periods of pulsed flux. All of the major pulse events for the period resulted in the delivery of detrital aggregates that covered part or all of the sediment surface as an organic carbon rich layer at ~4000 m depth. However, the magnitude of the measured Sediment Community Oxygen Consumption (SCOC) did not increase proportionally to the organic carbon inventory change. Here, a model of oxygen consumption, informed by the time series data at Sta. M in the CCE, suggests that aggregate flocs constitute a major source for benthic carbon and a barrier to mass transport of oxygen, leading to reduced carbon attenuation in surface sediments. The correlation of POC delivery with aggregate coverage shows that the majority of POC delivery during pulse events is likely to consume all of the oxygen within the aggregates. Results indicate that an increasing fraction of POC reaches the abyssal sediments at Sta. M under conditions that support increased net burial of carbon.This finding is significant in the context of the fraction of the total POC flux that occurs as pulse events in this important upwelling region. During the period from 2011 to 2017, a third of the total POC flux resulted in aggregate flocs that covered a significant portion of the sediment surface (>47%). Following the 2015–2016 El Nino period the flocs became a dominant feature of the sediment surface. More than 80% of the POC flux to near bottom sediment traps in 2017 occurred coincident with aggregate floc cover of more than 90% of the sediments. The resultant physical barrier to oxygen transport and relatively low consumption of newly delivered carbon indicate conditions that are more typical of environments having low oxygen bottom waters.

Benthic metabolism on Chatham Rise, New Zealand continental margin: Temporal and spatial variability, and relationships with macrofauna and environmental factors

Predicting the impacts of anthropogenic disturbance on deep-sea ecosystems requires a thorough understanding of both environmental and faunal drivers of ecosystem function. Studies of deep-sea ecosystems, however, typically consider environmental drivers only and seldom investigate the effects of seabed communities on ecosystem processes. Here, we describe spatial and temporal variation in sediment community oxygen consumption (SCOC), a measure of benthic metabolism and carbon mineralisation, across several sites on Chatham Rise, off the east coast off New Zealand's South Island, and investigate relationships between environmental factors, macrofauna community parameters, and SCOC in order to quantify their relative contributions to benthic metabolism. SCOC differed significantly among sites but not between the two sampling events in August and December 2015. SCOC was significantly and most strongly correlated with estimated particulate organic carbon flux in both August and December in marginal regressions (R2 = 0.53–0.61), followed by macrofaunal abundance (0.28–0.52), macrofaunal taxon richness (0.09–0.50) and water depth (0.30–0.35). Variation partitioning analysis showed that in late winter (August), most of the variability in SCOC was accounted for by environmental variables independently of macrofauna, whereas in summer (December), most of the variability in SCOC was accounted for by the combined effects of environment and macrofauna. We also observed a greater effect of macrofauna independent of environment in summer than in late winter (R2 = 0.13 and 0.05, respectively). Our findings indicate that the contribution of macrofauna to benthic metabolism can be substantial and vary temporally. In addition, our findings suggest that the shifts in ecosystem function resulting from anthropogenic stressors will be difficult to predict due to the interactive effects of environment and macrofauna on benthic metabolism. Nevertheless, if particulate organic carbon flux decreases on Chatham Rise as predicted in climate change scenarios, we anticipate that impacts on benthic metabolism will be most strongly felt in the less productive areas of the rise due to the stronger link between macrofauna and SCOC at low macrofaunal densities.

The SCOC database, a large, open, and global database with sediment community oxygen consumption rates

Sediment community oxygen consumption (SCOC) rates provide important information about biogeochemical processes in marine sediments and the activity of benthic microorganisms and fauna. Therefore, several databases of SCOC data have been compiled since the mid-1990s. However, these earlier databases contained much less data records and were not freely available. Additionally, the databases were not transparent in their selection procedure, so that other researchers could not assess the quality of the data. Here, we present the largest, best documented, and freely available database of SCOC data compiled to date. The database is comprised of 3,540 georeferenced SCOC records from 230 studies that were selected following the procedure for systematic reviews and meta-analyses. Each data record states whether the oxygen consumption was measured ex situ or in situ, as total oxygen uptake, diffusive or advective oxygen uptake, and which measurement device was used. The database will be curated and updated annually to secure and maintain an up-to-date global database of SCOC data.

Episodic organic carbon fluxes from surface ocean to abyssal depths during long-term monitoring in NE Pacific

Growing evidence suggests substantial quantities of particulate organic carbon (POC) produced in surface waters reach abyssal depths within days during episodic flux events. A 29-year record of in situ observations was used to examine episodic peaks in POC fluxes and sediment community oxygen consumption (SCOC) at Station M (NE Pacific, 4,000-m depth). From 1989 to 2017, 19% of POC flux at 3,400 m arrived during high-magnitude episodic events (≥mean + 2 σ), and 43% from 2011 to 2017. From 2011 to 2017, when high-resolution SCOC data were available, time lags between changes in satellite-estimated export flux (EF), POC flux, and SCOC on the sea floor varied between six flux events from 0 to 70 days, suggesting variable remineralization rates and/or particle sinking speeds. Half of POC flux pulse events correlated with prior increases in EF and/or subsequent SCOC increases. Peaks in EF overlying Station M frequently translated to changes in POC flux at abyssal depths. A power-law model (Martin curve) was used to estimate abyssal fluxes from EF and midwater temperature variation. While the background POC flux at 3,400-m depth was described well by the model, the episodic events were significantly underestimated by ∼80% and total flux by almost 50%. Quantifying episodic pulses of organic carbon into the deep sea is critical in modeling the depth and intensity of POC sequestration and understanding the global carbon cycle.

Functional trait responses to sediment deposition reduce macrofauna-mediated ecosystem functioning in an estuarine mudflat

Abstract. Human activities, among which dredging and land use change in river basins, are altering estuarine ecosystems. These activities may result in changes in sedimentary processes, affecting biodiversity of sediment macrofauna. As macrofauna controls sediment chemistry and fluxes of energy and matter between water column and sediment, changes in the structure of macrobenthic communities could affect the functioning of an entire ecosystem. We assessed the impact of sediment deposition on intertidal macrobenthic communities and on rates of an important ecosystem function, i.e. sediment community oxygen consumption (SCOC). An experiment was performed with undisturbed sediment samples from the Scheldt river estuary (SW Netherlands). The samples were subjected to four sedimentation regimes: one control and three with a deposited sediment layer of 1, 2 or 5 cm. Oxygen consumption was measured during incubation at ambient temperature. Luminophores applied at the surface, and a seawater–bromide mixture, served as tracers for bioturbation and bio-irrigation, respectively. After incubation, the macrofauna was extracted, identified, and counted and then classified into functional groups based on motility and sediment reworking capacity. Total macrofaunal densities dropped already under the thinnest deposits. The most affected fauna were surficial and low-motility animals, occurring at high densities in the control. Their mortality resulted in a drop in SCOC, which decreased steadily with increasing deposit thickness, while bio-irrigation and bioturbation activity showed increases in the lower sediment deposition regimes but decreases in the more extreme treatments. The initial increased activity likely counteracted the effects of the drop in low-motility, surficial fauna densities, resulting in a steady rather than sudden fall in oxygen consumption. We conclude that the functional identity in terms of motility and sediment reworking can be crucial in our understanding of the regulation of ecosystem functioning and the impact of habitat alterations such as sediment deposition.

Impaired Short-Term Functioning of a Benthic Community from a Deep Norwegian Fjord Following Deposition of Mine Tailings and Sediments

The extraction of minerals from land-based mines necessitates the disposal of large amounts of mine tailings. Dumping and storage of tailings into the marine environment, such as fjords, is currently being performed without knowing the potential ecological consequences. This study investigated the effect of short-term exposure to different deposition depths of inert iron ore tailings (0.1, 0.5 and 3 cm) and dead subsurface sediment (0.5 and 3 cm) on a deep water (200 m) fjord benthic assemblage in a microcosm experiment. Biotic and abiotic variables were measured to determine structural and functional changes of the benthic community following an 11 and 16 day exposure with tailings and dead sediment, respectively. Structural changes of macrofauna, meiofauna and bacteria were measured in terms of biomass, density, community composition and mortality while measures of oxygen penetration depth, sediment community oxygen consumption and 13C-uptake and processing by biota revealed changes in the functioning of the system. Burial with mine tailings and natural sediments modified the structure and functioning of the benthic community albeit in a different way. Mine tailings deposition of 0.1 cm and more resulted in a reduced capacity of the benthic community to remineralize fresh 13C-labelled algal material, as evidenced by the reduced sediment community oxygen consumption and uptake rates in all biological compartments. At 3 cm of tailings deposition, it was evident that nematode mortality was higher inside the tailings layer, likely caused by reduced food availability. In contrast, dead sediment addition led to an increase in oxygen consumption and bacterial carbon uptake comparable to control conditions, thereby leaving deeper sediment layers anoxic and in turn causing nematode mortality at 3 cm deposition. This study clearly shows that even small levels (0.1 cm) of instantaneous burial by mine tailings may significantly reduce benthic ecosystem functioning on the short term. Furthermore, it reveals the importance of substrate characteristics and origin when studying the effects of substrate addition on marine benthic fauna. Our findings should alert decision makers when considering approval of new deep-sea tailings placement sites as this technique will have major negative impacts on benthic ecosystem functioning over large areas.

Estimating the effect of burrowing shrimp on deep-sea sediment community oxygen consumption.

Sediment community oxygen consumption (SCOC) is a proxy for organic matter processing and thus provides a useful proxy of benthic ecosystem function. Oxygen uptake in deep-sea sediments is mainly driven by bacteria, and the direct contribution of benthic macro- and mega-infauna respiration is thought to be relatively modest. However, the main contribution of infaunal organisms to benthic respiration, particularly large burrowing organisms, is likely to be indirect and mainly driven by processes such as feeding and bioturbation that stimulate bacterial metabolism and promote the chemical oxidation of reduced solutes. Here, we estimate the direct and indirect contributions of burrowing shrimp (Eucalastacus cf. torbeni) to sediment community oxygen consumption based on incubations of sediment cores from 490 m depth on the continental slope of New Zealand. Results indicate that the presence of one shrimp in the sediment is responsible for an oxygen uptake rate of about 40 µmol d−1, only 1% of which is estimated to be due to shrimp respiration. We estimate that the presence of ten burrowing shrimp m−2 of seabed would lead to an oxygen uptake comparable to current estimates of macro-infaunal community respiration on Chatham Rise based on allometric equations, and would increase total sediment community oxygen uptake by 14% compared to sediment without shrimp. Our findings suggest that oxygen consumption mediated by burrowing shrimp may be substantial in continental slope ecosystems.

Decadal Change in Sediment Community Oxygen Consumption in the Abyssal Northeast Pacific.

Long time-series studies are critical to assessing impacts of climate change on the marine carbon cycle. A 27-year time-series study in the abyssal northeast Pacific (Sta. M, 4000 m depth) has provided the first concurrent measurements of sinking particulate organic carbon supply (POC flux) and remineralization by the benthic community. Sediment community oxygen consumption (SCOC), an estimate of organic carbon remineralization, was measured in situ over daily to interannual periods with four different instruments. Daily averages of SCOC ranged from a low of 5.0 mg C m−2 day−1 in February 1991 to a high of 31.0 mg C m−2 day−1 in June 2012. POC flux estimated from sediment trap collections at 600 and 50 m above bottom ranged from 0.3 mg C m−2 day−1 in October 2013 to 32.0 mg C m−2 day−1 in June 2011. Monthly averages of SCOC and POC flux correlated significantly with no time lag. Over the long time series, yearly average POC flux accounted for 63 % of the estimated carbon demand of the benthic community. Long time-series studies of sediment community processes, particularly SCOC, have shown similar fluctuations with the flux of POC reaching the abyssal seafloor. SCOC quickly responds to changes in food supply and tracks POC flux. Yet, SCOC consistently exceeds POC flux as measured by sediment traps alone. The shortfall of ~37 % could be explained by sediment trap sampling artifacts over decadal scales including undersampling of large sinking particles. High-resolution measurements of SCOC are critical to developing a realistic carbon cycle model for the open ocean. Such input is essential to evaluate the impact of climate change on the oceanic carbon cycle, and the long-term influences on the sedimentation record.Electronic supplementary materialThe online version of this article (doi:10.1007/s10498-016-9293-3) contains supplementary material, which is available to authorized users.

Partitioning the contributions of mega-, macro- and meiofauna to benthic metabolism on the upper continental slope of New Zealand: Potential links with environmental factors and trawling intensity

Understanding and predicting change in deep-sea benthic ecosystem function remains a major challenge. Here, we conducted analyses combining data on the abundance and biomass of benthic fauna and sediment community oxygen consumption (SCOC) on New Zealand’s continental margin to estimate and compare the contributions of meio-, macro-, and megafauna to total benthic metabolism and identify potential links with environmental factors and trawling intensity. We focussed on two regions in close proximity-the high surface primary productivity Chatham Rise and low surface productivity Challenger Plateau. Mean megafauna biomass was twenty times greater on Chatham Rise than Challenger Plateau, likely reflecting differences in food supply between the two regions; this contrast in megafaunal biomass was mainly due to differences in mean body weight rather than abundance. Meio- and macrofauna made similar contributions to SCOC and together accounted for 12% of benthic metabolism on average. In contrast, the estimated contribution of megafauna never exceeded 1.5%. Significant positive correlations between faunal respiration and food availability indicate a link between food supply and benthic community function. Our analyses also show that fauna made a greater contribution to SCOC in conditions of high food availability, and that microorganisms (i.e., the proportion of SCOC not accounted for by the fauna) tended to be more dominant at sites with low food availability. These findings provide support for the concept that large organisms are more strongly affected by a reduction in food resources than small organisms, which in turn underlies one of the most widely described patterns in the deep-sea benthos, i.e., the reduction in organism body size with depth. Because metabolism in deep-sea sediments is typically dominated by microorganisms and small fauna, the absence of a relationship between bottom trawling intensity and the respiration of benthic fauna in the present study may be explained by benthic communities shifting towards smaller body size following physical disturbance. Future studies of deep-sea benthic ecosystem function will need to quantify the indirect influence of fauna on microbial metabolism through activities such as feeding and bioturbation in order to better understand the total contribution of benthic fauna to benthic processes.

Spatial patterns and environmental drivers of benthic infaunal community structure and ecosystem function on the New Zealand continental margin

To investigate regional drivers of spatial patterns in macro- and meio-faunal community structure (abundance, biomass and taxonomic diversity) and ecosystem function (sediment community oxygen consumption [SCOC]), we sampled two regions in close proximity on New Zealand's continental margin—the Chatham Rise and the Challenger Plateau. Sites (n = 15) were selected in water depths ranging from 266–1212 m to generate a gradient in sedimentary properties and, in particular, surface pelagic productivity. Both macro- and meio-fauna abundance and biomass was 2–3.5 times higher on the Chatham Rise than on the Challenger Plateau, reflecting regional differences in pelagic primary production. We also found significant inter- and intra-regional differences in macro-fauna taxonomic diversity with two distinctive site groupings in each region. Univariate and multivariate measures of macro-fauna community attributes were most strongly correlated with sediment photosynthetic pigment (explaining 24%–59% of the variation). Sediment pigment content was as equally important in explaining meio-fauna community structure (36%–7%). Unlike community structure, SCOC was most strongly correlated with depth (44%), most likely reflecting temperature effects on benthic metabolism. Our results highlight the importance of a benthic labile food supply in structuring infaunal communities on continental margins and emphasise a tight coupling between pelagic and benthic habitats.

Hydrocarbon contamination affects deep-sea benthic oxygen uptake and microbial community composition

Accidental oil well blowouts have the potential to introduce large quantities of hydrocarbons into the deep sea and disperse toxic contaminants to midwater and seafloor areas over ocean-basin scales. Our ability to assess the environmental impacts of these events is currently impaired by our limited understanding of how resident communities are affected. This study examined how two treatment levels of a water accommodated fraction of crude oil affected the oxygen consumption rate of a natural, deep-sea benthic community. We also investigated the resident microbial community’s response to hydrocarbon contamination through quantification of phospholipid fatty acids (PLFAs) and their stable carbon isotope (δ13C) values. Sediment community oxygen consumption rates increased significantly in response to increasing levels of contamination in the overlying water of oil-treated microcosms, and bacterial biomass decreased significantly in the presence of oil. Multivariate ordination of PLFA compositional (mol%) data showed that the structure of the microbial community changed in response to hydrocarbon contamination. However, treatment effects on the δ13C values of individual PLFAs were not statistically significant. Our data demonstrate that deep-sea benthic microbes respond to hydrocarbon exposure within 36h.

Empirical evidence reveals seasonally dependent reduction in nitrification in coastal sediments subjected to near future ocean acidification.

Research so far has provided little evidence that benthic biogeochemical cycling is affected by ocean acidification under realistic climate change scenarios. We measured nutrient exchange and sediment community oxygen consumption (SCOC) rates to estimate nitrification in natural coastal permeable and fine sandy sediments under pre-phytoplankton bloom and bloom conditions. Ocean acidification, as mimicked in the laboratory by a realistic pH decrease of 0.3, significantly reduced SCOC on average by 60% and benthic nitrification rates on average by 94% in both sediment types in February (pre-bloom period), but not in April (bloom period). No changes in macrofauna functional community (density, structural and functional diversity) were observed between ambient and acidified conditions, suggesting that changes in benthic biogeochemical cycling were predominantly mediated by changes in the activity of the microbial community during the short-term incubations (14 days), rather than by changes in engineering effects of bioturbating and bio-irrigating macrofauna. As benthic nitrification makes up the gross of ocean nitrification, a slowdown of this nitrogen cycling pathway in both permeable and fine sediments in winter, could therefore have global impacts on coupled nitrification-denitrification and hence eventually on pelagic nutrient availability.

Large salp bloom export from the upper ocean and benthic community response in the abyssal northeast Pacific: Day to week resolution

A large bloom of Salpa spp. in the northeastern Pacific during the spring of 2012 resulted in a major deposition of tunics and fecal pellets on the seafloor at ∼ 4000 m depth (Sta. M) over a period of 6 months. Continuous monitoring of this food pulse was recorded using autonomous instruments: sequencing sediment traps, a time‐lapse camera on the seafloor, and a bottom‐transiting vehicle measuring sediment community oxygen consumption (SCOC). These deep‐sea measurements were complemented by sampling of salps in the epipelagic zone by California Cooperative Ocean Fisheries Investigations. The particulate organic carbon (POC) flux increased sharply beginning in early March, reaching a peak of 38 mg C m−2 d−1 in mid‐April at 3400 m depth. Salp detritus started appearing in images of the seafloor taken in March and covered a daily maximum of 98% of the seafloor from late June to early July. Concurrently, the SCOC rose with increased salp deposition, reaching a high of 31 mg C m−2 d−1 in late June. A dominant megafauna species, Peniagone sp. A, increased 7‐fold in density beginning 7 weeks after the peak in salp deposition. Estimated food supply from salp detritus was 97–327% of the SCOC demand integrated over the 6‐month period starting in March 2012. Such large episodic pulses of food sustain abyssal communities over extended periods of time.