Abstract Previous research in our laboratory has documented seasonal alterations in humoral and cell‐mediated immunity in cotton rat (Sigmodon hispidus) populations. Based on these observations, we hypothesized that these seasonal differences in immune function were attributable in part to qualitative and quantitative numerical changes in specific splenocyte subpopulations. Lymphocytes were harvested from spleens of 139 cotton rats collected from a tallgrass prairie in central Oklahoma from December 1991 to September 1992. Unique splenocyte subpopulations were identified using fluorescein conjugated cell surface markers (concanavalin‐A, peanut agglutinin, soybean agglutinin, Helix pomatia agglutinin, pokeweed mitogen, and rabbit‐anti‐rat immunoglobulin‐G). All subpopulations examined were more abundant in fall and winter than spring and summer. Several plausible explanations for seasonal variation in abundance of splenocyte subpopulations are discussed.