A better understanding of the particle number size distribution aids to better assess the direct and indirect effects of particles on air quality and climate. In this study, particle number concentrations (PNCs) and size distribution along with chemical components, gaseous pollutants, and meteorological parameters were measured during a cruise campaign over the Bohai Sea. Four distinct periods were identified, showing significant impacts from continental outflows and ocean emissions on the particle number size distributions. Under the strong terrestrial pollution transport period, an obvious increase of PNCs below 1 μm was observed. The significant correlation between black carbon (BC) and PNCs in the size range of 0.35–1.0 μm suggested aging of aerosols during the long-range transport. An invaded dust pollution significantly reduced PNCs below 0.5 μm, while tripled the number concentration of particles larger than 0.5 μm. The ocean moisture facilitated the mixing between dust and secondary aerosols. An intense sea fog event observed during the cruise slightly increased PNCs smaller than 1 μm while decreasing larger ones. The correlations between PNCs below 0.5 μm and BC as well as SO2 demonstrated the impact of shipping activities on the formation of fresh particles. Aerosol vertical profiles in the marine boundary layer were measured by an unmanned aerial vehicle platform. The vertical patterns of particle number size distribution were largely governed by the origins of transported air masses and profiles of wind fields. Observations showed that the particle distribution in the lower marine boundary layer was typically inhomogeneous and rapidly evolving with time, highlighting the importance of strengthening the vertical observations of atmospheric parameters over the ocean.