Scallop Farming Research Articles

A scallop IκB protein involved in innate immunity acts as a key regulator of NF-κB

Chlamys farreri, a commercially important bivalve mollusk, is extensively cultivated in China. In recent years, the frequent occurrence of diseases has led to significant mortality in scallop farms. Despite this, our understanding of scallop's innate immune mechanisms remains limited. The NF-κB signaling pathway plays a crucial role in various biological processes, including cellular, developmental, and immune defense mechanisms. Inhibitors of NF-κB (IκB) proteins block the nuclear localization and DNA binding of NF-κB, thereby inhibiting its activity. However, the role of these proteins in invertebrates is not well understood. In this study, we identified a new homolog of the IκB gene in C. farreri, named CfIκB1. The open reading frame of CfIκB1 spans 1,089 bp, encoding 362 amino acids. Through sequence comparison and phylogenetic analysis, CfIκB1 was classified as a member of the invertebrate IκB family. Quantitative real-time PCR revealed that CfIκB1 transcripts are present in all examined tissues, with the highest expression observed in hemocytes. Expression levels were significantly upregulated following exposure to lipopolysaccharide, peptidoglycan, and polyinosinic:polycytidylic acid. Co-immunoprecipitation studies confirmed that CfIκB1 interacts with NF-κB family proteins CfRel-1 and CfRel. Dual-luciferase reporter assays demonstrated that CfIκB1 inhibits CfRel-dependent activation of NF-κB, ISRE, IFNβ, and AP-1. These findings suggest that CfIκB1 plays a crucial role in regulating NF-κB activity, which is integral to the innate immunity of C. farreri. This research enhances our understanding of the innate immune system in invertebrates and provides a theoretical basis for developing disease-resistant scallops at the molecular level.

Scallop farming impacts on dissolved organic matter cycling in coastal waters: Regulation of the low molecular weight fraction

To elucidate the impacts of scallop farming on the biogeochemical characteristics of low molecular weight (LMW, <1 kDa) dissolved organic matter (DOM), samples collected from a bay scallop mariculture area (MA) and its surrounding areas were determined for absorption and fluorescence spectroscopy after microfiltration and centrifugal ultrafiltration. The values of absorption coefficient a350 showed a spatial variation trend of inshore area (IA) > MA > non-mariculture area (NMA) for both bulk (<0.7 μm) and LMW fractions. Four fluorescent components, namely two protein-like components (tryptophan-like C1 and tyrosine-like C2) and two humic-like components (microbial humic-like C3 and terrestrial humic-like C4), were identified. Scallop farming influenced DOM transformation by altering phytoplankton abundance and promoting microbial degradation. In July, the net contributions of phytoplankton to the spectroscopy parameters of LMW-DOM in the surface seawater were 11.0% for a350, 4.3% for C1, 0.8% for C2, 0.6% for C3 and 3.0% for C4, respectively; the corresponding values of bulk DOM in the surface seawater were 24.3% for a350, 20.1% for C1, 5.9% for C2, 2.0% for C3, 2.9% for C4, respectively. Compared with NMA, the contributions of microbial degradation to a350 in MA's surface seawater increased by 9.0% for LMW-DOM and 6.9% for bulk DOM in July; however, the effects on different fluorescent components varied. In August, compared with NMA, the contributions of microbial degradation to spectroscopy parameters in the bottom water of MA decreased by 35.7% for a350, 6.3% for C2, 1.3% for C3, and 4.4% for C4 for LMW-DOM fraction; for bulk DOM, the corresponding contribution decreased by 10.8% for C1. These variations indicate that protein-like substances from scallop aquaculture are easily degraded into LMW substances, while humic-like substances degradation diminishes over time.

QTL mapping and candidate gene identification for lower temperature tolerance and growth traits using whole genome re-sequencing in Argopecten scallops

Lower temperature tolerance (LTT) and growth traits are vital to the success of overwintering scallop farming in the North China Sea. Bohai Red, a novel selected scallop strain is the main aquaculture species in this region. However, its poor LTT hinders its growth. To improve these traits, the larger Bohai Red scallop was crossed with the smaller bay scallop (A. irradians irradians) which tolerates low temperatures. The full-sib F1 hybrids and the whole-genome resequencing (WGR) method were used to construct a high-density genetic linkage map comprising 5925 single nucleotide polymorphisms (SNPs). The consensus linkage map consisted of 16 linkage groups spanning 1343.46 cM with an average distance of 0.23 cM. Based on this genetic linkage map, 42 potentially significant quantitative trait loci (QTLs) for LTT and growth were detected in eight different linkage groups (LGs) explaining 9.2–18.6% of the phenotypic variation. LG11 may regulate both LTT and growth as 20 QTLs were localized there. Eighteen candidate genes were identified, including 2 (SCARF1, SLC28A3) for LTT and 16 for the growth-related traits. To the best of our knowledge, the present work is one of the first to fine-map the LTT and growth-related QTLs in a genetic linkage map for hybrid Argopecten spp. scallops.

Express Diagnosis and Prediction of Remote Mass Mortality of Scallop Mizuhopecten yessoensis in Mariculture Farms Using Biomarkers

The cage method for the cultivation of the seaside scallop Mizuhopecten yessoensis is the most developed and popular method at sea farms in Primorsky Krai (Sea of Japan). However, this method of mollusk cultivation requires the careful planning of farming activities. Recently, mariculture farms in different countries have often encountered the mass mortality of cultured hydrobionts. The causes of such diseases are not quite clear, and often their identification requires a large amount of time and financial expenditure. Therefore, the use of predictive mechanisms based on biomarkers can help identify hidden threats in cultured scallop organisms that lead to mass mortality. In this study, we propose a rapid diagnostic method for predicting the distant mass mortality of M. yessoensis cultured in cages using biomarkers. The assessment of the pathological state of cultured mollusks at earlier developmental stages using the DNA comet method and oxidative stress markers (malondialdehyde) will allow the diagnosis and prediction of significant losses of marketable individuals in marine farms. In this study, we evaluated different age groups of mollusks cultured in the different water areas of Peter the Great Bay (Sea of Japan). During the study, we found that the death of cultured mollusks increased with increasing DNA damage and the active accumulation of malondialdehyde in tissues. It was observed that in scallops aged 1+ cultured in Severnaya Bay, high levels of DNA molecule damage and malondialdehyde were registered in the digestive glands and gills, which subsequently led to the death of almost all marketable individuals aged 3+. Therefore, the work is of significant value in assisting the aquaculture industry in solving the emerging problems of scallop farming and preserving marketable products. The proposed markers effectively reflect the condition of molluscs under extreme conditions caused by various factors, making them highly suitable for monitoring studies and forecasts on aquaculture farms.

A review of the oceanographic structure and biological productivity in the southern Okhotsk Sea

The southern Okhotsk Sea is one of the best fishing grounds in Japan, and the biogeochemistry, primary productivity, and physical aspects of this region have been heavily researched. However, a comprehensive review of the literature has not been written since that by doctor Takatoshi Takizawa more than 40 years ago (1982). This review actualizes the share–ground knowledge of the influence of oceanographic conditions on the primary productivity of the area. This review includes topics from physical/chemical oceanography and hydrobiology, focusing on the complex oceanological structures that support the high primary productivity of the southern Okhotsk Sea. It is known that the formation of all water masses is ultimately a consequence of the seasonal interchange of the Soya Warm Current and the East Sakhalin Current. However, it was revealed that there may be over- or under-estimations in different material and heat fluxes among water masses, especially regarding the dense Soya Warm Current. Recent studies have investigated the formation mechanisms of different water masses using chemical tracers, particularly radionuclides. Although promising if properly combined with traditional techniques, more isotopes or compounds are required to derive further conclusions. In terms of biological aspects, the high seeding potential of Thalassiosira after sea ice melting has been featured by many authors, and it was considered as the reason for its highest abundance in spring. The total carbon mass flux, which is essential for scallop farming, is highest in April–June, normally 120–160 mg C m−2day−1. The total carbon mass flux is maximum (up to 1165 mg C m−2day−1) after the spring bloom peak, and the spring bloom is strongly linked to sea ice retreatment. It was identified that the routes of 134Cs towards the Intermediate Cold Water, the formation mechanism of the Cold Water Belt, and the solubilization process of sea ice-carried particulate Fe require further research. Three major potential threats were identified, including the appearance of alien toxic species, a decrease in sea ice production in the northern parts of the Okhotsk Sea, and offshore gas and oil drilling northeastern of the Sakhalin Island. Publicly available scientific knowledge about the biogeochemistry of the southern Okhotsk Sea and its relationship with its rich primary productivity was actualized to 2022, anticipating that this work will become the starting line for many early career scientists endeavoring in interdisciplinary studies.

A molluscan IRF interacts with IKKα/β family protein and modulates NF-κB and MAPK activity

Interferon regulatory factor (IRF) family proteins are key transcription factors involved in vital physiological processes such as immune defense. However, the function of IRF in invertebrates, especially in marine shellfish is not clear. In this study, a new IRF gene (CfIRF2) was identified in the Zhikong scallop, Chlamys farreri, and its immune function was analyzed. CfIRF2 has an open reading frame of 1107 bp encoding 368 amino acids. The N-terminus of CfIRF2 consists of a typical IRF domain, with conserved amino acid sequences. Phylogenetic analysis suggested close evolutionary relationship with shellfish IRF1 subfamily proteins. Expression pattern analysis showed that CfIRF2 mRNA was expressed in all tissues, with the highest expression in the hepatopancreas and gills. CfIRF2 gene expression was substantially enhanced by a pathogenic virus (such as acute viral necrosis virus) and poly(I:C) challenge. Co-immunoprecipitation assay identified CfIRF2 interaction with the IKKα/β family protein CfIKK1 of C. farreri, demonstrating a unique signal transduction mechanism in marine mollusks. Moreover, CfIRF2 interacted with itself to form homologous dimers. Overexpression of CfIRF2 in HEK293T cells activated reporter genes containing interferon stimulated response elements and NF-κB genes in a dose-dependent manner and promoted the phosphorylation of protein kinases (JNK, Erk1/2, and P38). Our results provide insights into the functions of IRF in mollusks innate immunity and also provide valuable information for enriching comparative immunological theory for the prevention of diseases in scallop farming.

Four-year field survey on francisellosis in Yesso scallops Mizuhopecten yessoensis cultured in southern Hokkaido, Japan

Lethal impact of the bacterium Francisella halioticida on Yesso scallops Mizuhopecten yessoensis has been experimentally demonstrated, but epidemiological information for this bacterium infection in scallop farms has been limited. Thus, the present study conducted a monthly epidemiological survey for 4 years on adult scallops ear-hung from 2017 to 2020 on a scallop farm in northern Japan. As a result, the prevalence of F. halioticida in low temperature period increased for all year groups, but any association with scallop mortality was recognized. On the other hand, in the 2017–2019 year groups, increase of the prevalence and rapid declines of scallop survival were recognized in high-temperature periods. Additionally, overall survival in these year groups were apparently lower than the 2020 year group without increase of the prevalence in high-temperature period, suggesting that infection of F. halioticida in high-temperature periods may be associated with mortality of scallops. Abscess lesions in the adductor muscle were found to be associated with F. halioticida infection, but not always formed in infected scallops. Thus, presence of abscess lesions may serve as an indicator for francisellosis, but not necessarily a definitive symptom for this disease.

Collapse of scallop Nodipecten nodosus production in the tropical Southeast Brazil as a possible consequence of global warming and water pollution

Mollusc rearing is a relevant global socioeconomic activity. However, this activity has faced severe problems in the last years in southeast Brazil. The mariculture scallop production dropped from 51,2 tons in 2016 to 10,2 tons in 2022 in the Baia da Ilha Grande (BIG; Rio de Janeiro). However, the possible causes of this collapse are unknown. This study aimed to analyze decadal trends of water quality in Nodipecten nodosus spat and adult production in BIG. We also performed physical-chemical and biological water quality analyses of three scallop farms and two nearby locations at BIG in 2022 to evaluate possible environmental stressors and risks. Scallop spat production dropped drastically in the last five years (2018–2022: mean ± stdev: 0.47 ± 0.45 million). Spat production was higher in colder waters and during peaks of Chlorophyll a in the last 13 years. Reduction of Chlorophyll a coincided with decreasing spat production in the last five years. Warmer periods (>27 °C) of the year may hamper scallop development. Counts of potentially pathogenic bacteria (Vibrios) and Escherichia coli were significantly higher in warmer periods which may further reduce scallop productivity. Shotgun metagenomics of seawater samples from the five studied corroborated these culture-based counts. Vibrios and fecal indicator bacteria metagenomic sequences were abundant across the entire study area throughout 2022. The results of this study suggest the collapse of scallop mariculture is the result of a synergistic negative effect of global warming and poor seawater quality.

Scallop interferon regulatory factor 1 interacts with myeloid differentiation primary response protein 88 and is crucial for antiviral innate immunity

The interferon regulatory factor (IRF) family comprises transcription factors that are crucial in immune defense, stress response, reproduction, and development. However, the function of IRFs in invertebrates is unclear. Here, the full-length cDNA of an IRF-encoding gene (CfIRF1) in the Zhikong scallop (Chlamys farreri) comprising 2007 bp with an open reading frame of 1053 bp that encoded 350 amino acids was characterized, and its immune function was studied. The CfIRF1 protein contained a typical IRF domain at its N-terminus. CfIRF1 was clustered with other proteins of the IRF1 subfamily, implying that they were closely related. CfIRF1 mRNA transcripts could be detected in all tested scallop tissues, with the highest expression observed in the gills and hepatopancreas. CfIRF1 expression was significantly induced by the polyinosinic–polycytidylic acid and acute viral necrosis virus challenge. CfIRF1 could directly interact with myeloid differentiation primary response protein 88 (MyD88), the key adaptor molecule of the toll-like receptor signaling pathway. CfIRF1 did not interact with scallop IKK1 (IKKα/β family protein), IKK2, IKK3 (IKKε/TBK1 family protein), or with other IRF family proteins (IRF2 or IRF3). However, CfIRF1 interacted with itself to form a homodimer. CfIRF1 could specifically activate the interferon β promoter of mammals and the promoter containing the interferon-stimulated response element (ISRE) in a dose-dependent manner. The truncated form of CfIRF1 had a significantly reduced ISRE activation ability, indicating that structural integrity was crucial for CfIRF1 to function as a transcription factor. Our findings provide insights into the functions of mollusk IRFs in innate immunity. The research results also provide valuable information that enriches the theory of comparative immunology and that can help prevent diseases in scallop farming.

Scallop RIG-I-like receptor 1 responses to polyinosinic:polycytidylic acid challenge and its interactions with the mitochondrial antiviral signaling protein

Retinoic acid-inducible gene I (RIG-I)-like receptors (RLRs) are a class of pattern recognition receptors located in the cytoplasm that play a key role in antiviral innate immunity in animals. However, few studies have been conducted on the function of RLR proteins in invertebrates. In this study, the complete coding sequence of the RLR gene of the Zhikong scallop, Chlamys farreri, was obtained and named CfRLR1 with an aim to study the response of CfRLR1 to polyinosinic:polycytidylic acid [poly (I:C)] stimulation and the interaction between the CfRLR1 and C. farreri mitochondrial antiviral signaling (MAVS) protein. Sequence analysis revealed that CfRLR1 encodes 1161 amino acids, and the encoded protein covers two tandem caspase activation and recruitment domains (CARDs), a helicase domain, and a C-terminal regulatory domain. Phylogenetic analysis revealed that CfRLR1 belongs to the RLR family of mollusks. Quantitative real-time polymerase chain reaction showed that CfRLR1 mRNA was expressed in all tested tissues, with its highest expression observed in feet and gill tissues. Furthermore, CfRLR1 expression in the gill tissues was significantly induced after the poly (I:C) challenge. Finally, the results of co-immunoprecipitation and yeast two-hybrid assays revealed that CfRLR1 can bind to the CfMAVS protein via CARD–CARD interactions. Overall, our results elucidate the immune function of invertebrate RLR proteins and provide valuable information on viral disease control for scallop farming.

Scallop NEMO interacts with IKK1 and regulates host innate immunity against PAMPs

The IκB kinase (IKK) complex, which is essential for the activation of the transcription factor NF-κB, is composed of IKK1 (IKKα), IKK2 (IKKβ), and the key regulatory protein NF-κB essential modulator (NEMO). However, there are few studies on the function of NEMO in invertebrates. In this study, we obtained the complete coding sequence of the NEMO gene of the Zhikong scallop Chlamys farreri and studied its response to pathogen-related molecular pattern (PAMP) stimulation and its interaction with the IKK1 protein. Sequence analysis revealed that Chlamys farreri NEMO (CfNEMO) encodes 778 amino acids, and the encoded protein contains a typical NEMO domain, two coiled coils, a putative leucine zipper motif, and a C-terminal zinc finger domain. Phylogenetic relationship analysis showed that CfNEMO belongs to the NEMO family of mollusks in invertebrates. Real-time quantitative PCR showed that CfNEMO transcripts were expressed in all tissues tested in scallops, with the highest expression in the gills. Furthermore, the expression level of CfNEMO in the gills was significantly induced after lipopolysaccharide, peptidoglycan, and polyinosinic–polycytidylic acid challenge. Finally, the results of co-immunoprecipitation showed that CfNEMO can interact with IKK1 protein (IKKα/IKKβ family member). And by constructing truncated mutants, we found that the interaction between the two proteins is mediated by the NEMO domain of CfNEMO and the SDD (scaffold dimerization domain) domain of IKK1. In conclusion, our results lay the foundation for in-depth understanding of the innate immune function of invertebrate NEMO and the formation of the IKK complex. Our findings provide valuable information on disease control and management in scallop farming.

The impacts of intensive scallop farming on dissolved organic matter in the coastal waters adjacent to the Yangma Island, North Yellow Sea

In-situ field investigations coupled with incubation experiments were conducted in the coastal waters adjacent to the Yangma Island to explore the impacts of intensive bay scallop farming on the quantity and composition of dissolved organic matter (DOM). During the scallop farming period, the values of dissolved organic carbon (DOC), chromophoric dissolved organic matter (CDOM) and fluorescence dissolved organic matter (FDOM) in the mariculture area (MA) were generally higher than those in the non-mariculture area (NMA). Bay scallops released a large amount of DOM with the characteristics of high molecular weight and low degree of humification into the water column through excretion, which altered the DOM biogeochemical cycle. The DOM excretion fluxes by scallop were calculated based on incubation experiments. The results showed that, without considering the DOM transformation in the water, the excretion process of bay scallops in a growth cycle can increase the concentration of DOC, CDOM and fluorescent components C1–C4 in the seawater in MA by 19.7 μmol l−1, 0.048 m−1, 0.065 QSU, 0.164 QSU, 0.017 QSU and 0.015 QSU, respectively. Assuming that the labile part of DOM excreted by scallops was completely aerobic decomposed, it could reduce DO and pH in the seawater by ~13.4 μmol l−1 and ~ 0.018 in MA. This study highlights the impact of human activities (scallop farming activities) on DOM cycle in coastal waters, which can help guide future policy formulating of mariculture and ecological protection.

Massive shellfish farming might accelerate coastal acidification: A case study on carbonate system dynamics in a bay scallop (Argopecten irradians) farming area, North Yellow Sea

Seven cruises were carried out in a bay scallop (Argopecten irradians) farming area and its surrounding waters, North Yellow Sea, from March to November 2017 to study the dynamics of the carbonate system and its controlling factors. Results indicated that the studied parameters were highly variability over a range of spatiotemporal scales, comprehensively forced by various physical and biological processes. Mixing effect and scallop calcification played the most important role in the seasonal variation of total alkalinity (TAlk). For dissolved inorganic carbon (DIC), in addition to mixing, air-sea exchange and microbial activity, e.g. photosynthesis and microbial respiration processes, had more important effects on its dynamics. Different from the former, the changes of water pHT, partial pressure of CO2 (pCO2) and aragonite saturation state (ΩA) were mainly controlled by the combining of the temperature, air-sea exchange, microbial activity and scallop metabolic activities. In addition, the results indicated that massive scallop farming can significantly increase the DIC/TAlk ratio by reducing the TAlk concentration in seawater, thereby reducing the buffering capacity of the carbonate system in seawater especially for ΩA. Preliminary calculated, ~75.7 and ~45.5 μmol kg−1 of TAlk were removed from the surface and bottom waters respectively in one scallop cultivating cycle. If these carbonates cannot be replenished in time, it is likely to accelerate the acidification process of coastal waters. This study highlighted the control mechanism of the carbonate system under the influence of bay scallop farming, and provided useful information for revealing the potential link between human activities (shelled-mollusc mariculture) and coastal acidification.

Three dimensional numerical modeling using a multi-level nesting system for identifying a Water layer suitable for scallop farming in Tongyeong, Korea

Three-dimensional modeling was performed in Tongyeong, South Korea to identify a space suitable for Yesso scallop farming that may not be successful if seawater temperature remains above 22 °C. In the research area, an underwater basin was found at a depth of 70 m; the depth outside the basin was not deeper than 30 m. It was expected that the water temperature in the interior of the basin might be low enough for farming during summer. The present study was then designed to investigate the temperature distribution in this basin area to verify if a water layer with consistently low temperature existed below the surface layer, using a MOHID (MOdelo HIDrodinámico) three-dimensional numerical model. The model applied mixed vertical coordinates so that the difficulties in modeling near the basin, where water depth sharply changes, could be overcome. In addition, a multi-level nesting system was developed based on the 72 -h forecasting system of the sea status around South Korea, which increased the modeling accuracy using updated boundary conditions. The model was validated by the measured tide and temperature data. The results showed that a strong thermocline was formed at depth of 15 m and a sub-surface space existed at depths deeper than 30 m, where seawater temperature was lower than 22 °C even in summer, which indicates the possibility of successful farming in the research area. The measurements also supported this result because dissolved oxygen and chlorophyll-a were not scarce in the sub-surface space probably due to the strong tidal mixing that could bring the surface seawater properties down below the thermocline. It was also found that the model was effective in resolving the thin thermocline and the sub-surface space below it due to the mixed vertical coordinate system.

Construction of the Remote Monitoring System for Depth of Mainline and Water Temperature of Scallop Farming Facilities Using a Mobile Phone Network and an Ultrasonic Telemetry

Construction of the Remote Monitoring System for Depth of Mainline and Water Temperature of Scallop Farming Facilities Using a Mobile Phone Network and an Ultrasonic Telemetry

Distinguishing nutrient-depleting effects of scallop farming from natural variabilities in an offshore sea ranch

While bivalve farming is well recognized in terms of modifying the biogeochemical cycle through filter-feeding and biodeposition, its impacts on water column nutrient concentrations in various ecosystems may vary from depletion to addition. Hypothesizing that the variability arises from overlap of farming-associated impacts and pelagic processes, nutrient concentrations and phytoplankton biomass were investigated monthly in an offshore sea ranch, to detect the real impacts of bottom-seeding scallop farming. Nutrient concentrations in water column average increased from July to December following successive surface freshening and disappearance of thermal stratification. Abrupt decrease was observed in March, along with increase in chlorophyll a concentration. The silicate concentration decreased below 2 μM in all depth layers in the mariculture area in March and April, whereas silicate limitation in open waters was commonly observed in April. Compared to open waters, inorganic nitrogen and phosphate concentrations were significantly lower in the mariculture area on an annual cycle, whereas silicate concentration was lower in spring and higher in summer. Our results indicate that scallop farming in frequently refreshed waters can act as nutrient sink through top-down effects. Without exogenous supply, it can also introduce the limitation of nutrient (silicate) with low regeneration rate and stimulate shift in the phytoplankton community structure.

Simulation of Yesso scallop, Patinopecten yessoensis, growth with a dynamic energy budget (DEB) model in the mariculture area of Zhangzidao Island

Scallop farming is the main economic activity in the northern parts of China, with a production that has increased quickly since the 1980s. In the present study, a bioenergetics growth model to the Yesso scallop, Patinopecten yessoensis, in the mariculture area of Zhangzidao Island was applied, based on dynamic energy budget (DEB) theory which describes energy flux variation through different compartments of the scallop body. Estimates of most DEB parameters were based on available physiological data or published information, and the two parameters, i.e., detritus contribution to food (αDet) and half-saturation constant for food (XK) were calibrated using datasets in this study. The model relied on two forcing variables: water temperature and food density expressed by different food quantifiers. The sets of data used to validate the model came from a growth experiment performed on P. yessoensis for bottom-sowing culture. The DEB model developed here for P. yessoensis was allowed to simulate growth and reproduction of the scallop in the growing area of the Zhangzidao Island.

Nursery and Grow‐Out Strategy Optimization in Bay Scallop Argopecten irradians Aquaculture

AbstractThe northeastern United States once had a robust and profitable wild bay scallop Argopecten irradians commercial fishery that generated revenue for fishermen and quality seafood for regional consumption. Since the 1980s, bay scallop landings have been declining due to overfishing, habitat loss, and coastal water quality degradation. There is potential for bay scallop aquaculture to fill the void left by the decline of the wild fishery. However, further investigation into optimizing growth and survival in the nursery, grow‐out, and overwintering phases is needed. Growth and survival as related to stocking density were investigated during the nursery phase using a floating downweller system. Over the 6‐week nursery period, survival, growth, and food availability were documented in relation to flow rates and initial stocking densities. Initial bay scallop stocking density largely predicted mean bay scallop growth rates (mm/d) over the 6‐week observation period but had little impact on survival. At the end of the observation period, bay scallops were moved out of the nursery system to three different grow‐out locations on Cape Cod. At each location, bay scallops were stocked into three surface gear types (floating bags of two different mesh sizes [6 or 9 mm] or hanging trays) and bottom cages to investigate grow‐out phase strategies. In exposed, high‐energy environments, the surface gear was susceptible to damage, and bay scallop growth rates and survival were impacted. In low‐energy environments, growth rates and survival were similar between surface and bottom gear. In both low‐ and high‐energy environments, bay scallop growth rates (mm/d) declined significantly once temperatures dropped below 15°C. Observed growth rates and survival in the configurations examined in this study indicate that bay scallop farming on New England shellfish farms is viable.

Assessing environmental effects of the bay scallop Argopecten irradians culture in China: Using abiotic and biotic indicators

This study aims to identify the effect of biodeposition from a non-indigenous scallop (bay scallop) farm on sediment organisms in a semi-closed bay in Bohai Sea, China. Sediment characteristics, the meifauna community, and harpacticoid copepod assemblages were investigated before aquaculture and during the high biodeposition period at three scallop farms: Sandy-Shallow (SS), Muddy Shallow (MS), and Muddy Deep (MD), and their correspondent control sites. Total organic carbon and total nitrogen did not accumulate under the scallop farms. Although sedimentary bioavailable organic matter (biopolycarbon and Chlorophyll a) can accumulate under the scallop farms, all sediment characteristics were within the range of a meso-oligotrophic state. Bioindicators showed a location-specific response. Only in Farm SS the meiofauna community differed from the control site as there was a larger proportion of nematodes. The density and diversity of harpacticoid copepods were enhanced by scallop farms in MD, while a slight reduction of copepod density was found at SS due to the scallop farming. The overall results suggested that this non-indigenous scallop farming had minimal detrimental effect on the benthic environment in Laizhou Bay. Also, the bioavailable organic matter, the entire meiofauna community and harpacticoid copepod assemblages were useful tools for assessing of the potential environmental impact of shellfish farming

Impact of farming non-indigenous scallop Argopecten irradians on benthic ecosystem functioning: a case-study in Laizhou Bay, China

The farming of the non-indigenous bay scallop Argopecten irradians in coastal waters generates large amounts of biodeposits that potentially change the trophic pathways and quality of the benthic food web at lower trophic levels such as meiobenthos. To understand the trophic link between faecal pellets of bay scallop and meiobenthos in the aquaculture area, we investigated the resource use of harpacticoid copepods and nematodes inside and outside of 3 bay scallop farms in Laizhou Bay (Bohai Sea, China) using natural abundance of stable carbon and nitrogen isotopes together with fatty acid profiling. Faeces were found to be enriched in delta N-15 compared to all other food sources, which made faecal matter traceable. The enriched delta N-15 in several meiobenthos at the farms, together with the mixing model results, indicated that faeces could be a new food source for most of harpacticoid copepods and some nematodes. The quantities and the pathways of assimilation differed between the copepod families, depending on their feeding behaviors and the receiving environment. Furthermore, due to the presence of higher levels of polyunsaturated fatty acids, in particular docosahexaenoic acid, the dominant copepod family Canuellidae that abundantly consumed scallop faeces showed enhanced nutritional quality compared with those in the control sites. Thus, aquaculture of non-indigenous bay scallops provided a food source that was directly and indirectly consumed by meiobenthos underneath the scallop farms and improved the quality of lower level consumers as a food item in the benthic food web.