Soil Samples Research Articles

Complete genome sequences of Arthrobacter globiformis phages Uzumaki and Argan of cluster AU6.

Bacteriophages Uzumaki and Argan infect Arthrobacter globiformis B-2880 isolated from soil samples in Long Island, New York. These bacteriophages have lambda-like morphology with prolate capsid and share 97% gene content similarity. These traits place them in cluster AU6 with other related Arthrobacter phages.

Deciphering Indigenous Bacterial Diversity of Co-Polluted Sites to Unravel Its Bioremediation Potential: A Metagenomic Approach.

Polluted drains across the globe are affected due to reckless disposal of untreated industrial effluents resulting in significant water pollution affecting microbial community structure/dynamics. To elucidate this, polluted samples were collected from Budha Nala (BN) drain, Tung Dhab (TD) drain, and wastewater treatment plant (WWTP) receiving an inflow of organic pollutants as well as heavy metals due to anthropogenic activities. The sample of unpolluted pristine soil (PS) was used as control, as there is no history of usage of organic chemicals at this site. The bacterial diversity of these samples was sequenced using the Illumina MiSeq platform by amplifying the V3/V4 region of 16S rRNA. The majority of operational taxonomic unit (OTUs) at polluted sites belonged to phyla Proteobacteria specifically Gammaproteobacteria class, followed by Actinobacteria, Bacteriodetes, Chloroflexi, Firmicutes, Planctomycetes, WS6, and TM7, whereas unpolluted site revealed the prevalence of Proteobacteria followed by Actinobacteria, Planctomycetes, Firmicutes, Acidobacteria, Chloroflexi, Bacteroidetes, Verrucomicrobia, and Nitrospirae. The data sets decode unclassified species of the phyla Proteobacteria, Bacteriodetes, Chloroflexi, Firmicutes, and WS6, along with some unclassified bacterial species. The study provided a comparative study of changed microbial community structure, their possible functions across diverse geographical locations, and identifying specific bacterial genera as pollution bio-indicators of aged polluted drains.

Integrative analysis of microbiome and metabolome revealed the effect of microbial inoculant on microbial community diversity and function in rhizospheric soil under tobacco monoculture.

Over-application of chemical fertilizers and continuous cropping obstacles seriously restrict the sustainable development of tobacco production. Localized fertilization of beneficial microbes has potential advantages in achieving higher productivity, but the underlying biological mechanisms of interactions between rhizospheric microorganisms and the related metabolic cycle remain poorly characterized. Here, an integrative analysis of microbiomes with non-targeted metabolomics was performed on 30 soil samples of rhizosphere, root surrounding, and bulk soils from flue-cured tobacco under continuous and non-continuous monocropping systems. The analysis was conducted using UPLC-MS/MS platforms and high-throughput amplicon sequencing targeting the bacterial 16S rRNA gene and fungal ITS gene. The microbial inoculant consisted of Bacillus subtilis, B. velezensis, and B. licheniformis at the ratio of 1:1:1 in effective microbial counts, improved the cured leaf yield and disease resistance of tobacco, and enhanced nicotine and nitrogen contents of tobacco leaves. The bacterial taxa Rhizobium, Pseudomonas, Sphingomonadaceae, and Burkholderiaceae of the phylum Proteobacteria accumulated in high relative abundance and were identified as biomarkers following the application of the microbial inoculant. Under continuous monocropping, metabolomics demonstrated that the application of the microbial inoculant significantly affected the soil metabolite spectrum, and the differential metabolites were significantly enriched to the synthesis and degradation of nicotine (nicotinate and nicotinamide metabolism and biosynthesis of alkaloids derived from nicotinic acid). In addition, microbes were closely related to the accumulation of metabolites through correlation analysis. The interactions between plant roots and rhizospheric microorganisms provide valuable information for understanding how these beneficial microbes affect complex biological processes and the adaption capacity of plants to environments.IMPORTANCEThis study elaborated on how the microbial fertilizer significantly changed overall community structures and metabolite spectrum of rhizospheric microbes, which provide insights into the process of rhizosphere microbial remolding in response to continuous monocropping. we verified the hypothesis that the application of the microbial inoculant in continuous cropping would lead to the selection of distinct microbiota communities by establishing models to correlate biomarkers. Through correlation analysis of the microbiome and metabolome, we proved that rhizospheric microbes were closely related to the accumulation of metabolites, including the synthesis and degradation of nicotine. The interactions between plant roots and rhizospheric microorganisms provide valuable information for understanding how these beneficial microbes affect complex biological processes and the adaption capacity of plants to environments.

Compost amendment in urban gardens: elemental and isotopic analysis of soils and vegetable tissues.

Urban horticulture poses a sustainable form of food production, fosters community engagement and mitigates the impacts of climate change on cities. Yet, it can also be tied to health challenges related to soil contamination. This work builds on a previous study conducted on eleven urban gardens in the city of Vienna, Austria. Following the findings of elevated Pb levels in some soil and plant samples within that project, the present study investigates the elemental composition of soil and plants from two affected gardens 1year after compost amendment. Inductively coupled plasma mass spectrometry (ICP-MS) analysis of skin, pulp and seeds of tomato fruits revealed minor variations in elemental composition which are unlikely to have an impact on food safety. In turn, a tendency of contaminant accumulation in root tips and leaves of radishes was found. Washing of lettuce led to a significant reduction in the contents of potentially toxic elements such as Be, Al, V, Ni, Ga and Tl, underscoring the significance of washing garden products before consumption. Furthermore, compost amendments led to promising results, with reduced Zn, Cd and Pb levels in radish bulbs. Pb isotope ratios in soil and spinach leaf samples taken in the previous study were assessed by multi-collector (MC-) ICP-MS to trace Pb uptake from soils into food. A direct linkage between the Pb isotopic signatures in soil and those in spinach leaves was observed, underscoring their effectiveness as tracers of Pb sources in the environment.

Differential regulation of belowground rhizospheric ecosystem by biological and chemical nitrogen supplies: implications for maize yield enhancement mechanisms.

Nitrogen (N) content affects aboveground maize growth and nutrient absorption by altering the belowground rhizospheric ecosystem, impacting both yield and quality. However, the mechanisms through which different N supply methods (chemical and biological N supplies) regulate the belowground rhizospheric ecosystem to enhance maize yield remain unclear. To address this issue, we conducted a field experiment in northeast China, comprising three treatments: maize monocropping without N fertilizer application (MM), maize/alfalfa intercropping without N fertilizer application (BNF), and maize monocropping with N fertilizer application (CNS). The MM treatment represents the control, while the BNF treatment represents the biological N supply form, and CNS treatment represents the chemical N supply form. In the autumn of 2019, samples of maize and rhizospheric soil were collected to assess parameters including yield, rhizospheric soil characteristics, and microbial indicators. Both BNF and MM significantly increased maize yield and different yield components compared with MM, with no statistically significant difference in total yield between BNF and CNS. Furthermore, BNF significantly improved N by 12.61% and available N (AN) by 13.20% compared with MM. Furthermore, BNF treatment also significantly increased the Shannon index by 1.90%, while the CNS treatment significantly increased the Chao1 index by 28.1% and ACE index by 29.49%, with no significant difference between CNS and BNF. However, CNS had a more pronounced impact on structure of the rhizosphere soil bacterial community compared to BNF, inducing more significant fluctuations within the microbial network (modularity index and negative cohesion index). Regarding N transformation pathways predicted by bacterial functions, BNF significantly increased the N fixation pathway, while CNS significantly increased assimilatory nitrate reduction. In CNS, AN, NO3-N, NH4-N, assimilatory nitrate reduction, and community structure contributed significantly to maize yield, whereas in BNF, N fixation, community structure, community stability, NO3-N, and NH4-N played significant roles in enhancing maize yield. While CNS and BNF can achieve comparable maize yields in practical agricultural production, they have significantly different impacts on the belowground rhizosphere ecosystem, leading to different mechanisms of yield enhancement.

Multimedia Nitrogen and Phosphorus Migration and Source Control Using Multivariate Analysis and XGBoost: The Case Study in a Typical Agricultural Basin, Danjiangkou Reservoir

Preventing eutrophication requires a deep understanding of nutrient sources and migration processes. The Guanshan River in the Danjiangkou Reservoir was selected as a typical agricultural basin. River water, sediment, and soil samples were collected to determine nitrogen (N) and phosphorus (P) contents and forms. Multivariate statistical analysis, buffer analysis, and extreme gradient boosting regression (XGBoost) were used to investigate the nutrient sources, the sources’ scale effects, and migration. The results showed that the exogenous sources of river nutrients were fertilizer (provided phosphate (PO4-P) and ammonium (NH4-N)), domestic wastewater (provided nitrate (NO3-N) and organic nitrogen), and natural soil and rock leaching (provided PO4-P and organic phosphorus). Fertilization within 300–1200 m and domestic wastewater discharge within 150 m of the river affected the contents of the river nutrients significantly (with R ranging between 0.40 and 0.73, p ≤ 0.01). The sediment was the N source and P sink of the overlying water. With NH4-N/PO4-P compound fertilization, the NO3-N and calcium-bound phosphorus (Ca-P) exhibited co-enrichment. Appropriately increasing NH4-N application could stimulate P biological uptake, thus inhibiting P emigration from agricultural soil under N-limited states. In conclusion, this study effectively recognized river nutrient sources and their scale impacts and also explored more effective fertilization strategies, which are beneficial for the optimized management of agricultural activities.

Microenvironment heterogeneity affected by anthropogenic wildfire-perturbed soil mediates bacterial community in Pinus tabulaeformis forests

IntroductionIn recent years, the frequency and intensity of anthropogenic wildfires have drastically increased, significantly altering terrestrial ecosystems worldwide. These fires not only devastate vegetative cover but also impact soil environments and microbial communities, affecting ecosystem structure and function. The extent to which fire severity, soil depth, and their interaction influence these effects remains unclear, particularly in Pinus tabulaeformis forests.MethodsThis study investigated the impact of wildfire intensity and soil stratification on soil physicochemical properties and microbial diversity within P. tabulaeformis forests in North China. Soil samples were collected from different fire severity zones (Control, Light, Moderate, High) and depths (topsoil: 0–10 cm; subsoil: 10–20 cm). Analyses included measurements of soil pH, organic carbon (SOC), total nitrogen (TN), and other nutrients. Microbial diversity was assessed using 16S rRNA gene sequencing.ResultsOur findings revealed significant variations in soil pH, SOC, TN, and other nutrients with fire severity and soil depth, profoundly affecting microbial community composition and diversity. Soil pH emerged as a critical determinant, closely linked to microbial α-diversity and community structure. We found that fire severity significantly altered soil pH (p = 0.001), pointing to noteworthy changes in acidity linked to varying severity levels. Topsoil microbial communities primarily differentiated between burned and unburned conditions, whereas subsoil layers showed more pronounced effects of fire severity on microbial structures. Analysis of bacterial phyla across different fire severity levels and soil depths revealed significant shifts in microbial communities. Proteobacteria consistently dominated across all conditions, indicating strong resilience, while Acidobacteriota and Actinobacteriota showed increased abundances in high-severity and light/moderate-severity areas, respectively. Verrucomicrobiota were more prevalent in control samples and decreased significantly in fire-impacted soils. Chloroflexi and Bacteroidota displayed increased abundance in moderate and high-severity areas, respectively. Correlation analyses illustrated significant relationships between soil environmental factors and dominant bacterial phyla. Soil organic carbon (SOC) showed positive correlations with total nitrogen (TN) and alkaline hydrolysable nitrogen (AN). Soil pH exhibited a negative correlation with multiple soil environmental factors. Soil pH and available phosphorus (AP) significantly influenced the abundance of the phylum Myxococcota. Soil water content (WC) significantly affected the abundances of Acidobacteriota and Actinobacteriota. Additionally, ammonium nitrogen (NH4+-N) and nitrate nitrogen (NO3−-N) jointly and significantly impacted the abundance of the phylum Chloroflexi.DiscussionThis study highlights the significant long-term effects of anthropogenic wildfires on soil microenvironment heterogeneity and bacterial community structure in P. tabulaeformis forests in North China, 6 years post-fire. Our findings demonstrate that fire severity significantly influences soil pH, which in turn affects soil nutrient dynamics and enhances microbial diversity. We observed notable shifts in the abundance of dominant bacterial phyla, emphasizing the critical role of soil pH and nutrient availability in shaping microbial communities. The results underscore the importance of soil stratification, as different soil layers showed varying responses to fire severity, highlighting the need for tailored management strategies. Future research should focus on long-term monitoring to further elucidate the temporal dynamics of soil microbial recovery and nutrient cycling following wildfires. Studies investigating the roles of specific microbial taxa in ecosystem resilience and their functional contributions under varying fire regimes will provide deeper insights. Additionally, exploring soil amendments and management practices aimed at optimizing pH and nutrient availability could enhance post-fire recovery processes, supporting sustainable ecosystem recovery and resilience.

Species pool and soil properties in mangrove habitats influence the species-immigration process of diazotrophic communities across southern China.

Microbial immigration is an ecological process in natural environments; however, the ecological trade-off mechanisms that govern the balance between species extinction and migration are still lacking. In this study, we investigated the mechanisms underlying the migration of diazotrophic communities from soil to leaves across six natural mangrove habitats in southern China. The results showed that the diazotrophic alpha and beta diversity exhibited significant regional and locational variations. The diazotrophic species pool gradually increased from the leaves to nonrhizosphere soil at each site, exhibiting a vertical distribution pattern. Mantel test analyses suggested that climate factors, particularly mean annual temperature, significantly influenced the structure of the diazotrophic community. The diazotrophic community assembly was mainly governed by dispersal limitation in soil and root samples, whereas dispersal limitation and ecological drift were dominant in leaves. Partial least squares path modeling revealed that the species pool and soil properties, particularly the oxidation-reduction potential and pH, were closely linked to the species-immigration ratio of diazotrophic communities. Our study provides novel insights for understanding the ecological trait diversity patterns and spread pathways of functional microbial communities between below- and aboveground habitats in natural ecosystems.IMPORTANCEEnvironmental selection plays key roles in microbial transmission. In this study, we have provided a comprehensive framework to elucidate the driving patterns of the ecological trade-offs in diazotrophic communities across large-scale mangrove habitats. Our research revealed that Bradyrhizobium japonicum, Marinobacterium lutimaris, and Agrobacterium tumefaciens were more abundant in root-associated soil than in leaves by internal and external pathways. The nonrhizospheric and rhizospheric soil samples harbored the most core amplicon sequence variants, indicating that these dominant diazotrophs could adapt to broader ecological niches. Correlation analysis indicated that the diversities of the diazotrophic community were regulated by biotic and abiotic factors. Furthermore, this study found a lower species immigration ratio in the soil than in the leaves. Both species pool and soil properties regulate the species-immigration mechanisms of the diazotrophic community. These results suggest that substantial species immigration is a widespread ecological process, leading to alterations in local community diversity across diverse host environments.

Heavy Metal Pollution in Gas Flare-Impacted Soils: An Assessment Using Pollution Indices in Obunagha, Bayelsa State, Nigeria

Gas flaring is the controlled burning of natural gas which occurs as a result of the activities of oil exploration and exploitation using flare stacks. In Nigeria, gas flaring activities is high and it mainly takes place in the Niger Delta region. The aim of this study was to investigate the bioavailability and concentration of heavy metals pollution of gas flare-impacted soils using pollution indices such as contamination factor, geo-accumulation index and pollution load index. Soil samples were collected with soil auger at depths of 0-15 cm from distances of 200 m, 500 m, 1000 m, 2000 m, and 3000 m away from the flaring point. Flame atomic absorption spectrometry was used to assess the presence of the following heavy metals in the soils: cadmium, chromium, nickel, zinc, copper, and manganese. The findings revealed that Fe (90% bioavailability) had the highest bioavailability among the metals tested in the soils, while Cr (45%) had the lowest. The metals bioavailability decreased in the order of Fe>Mn>Cu>Cd>Ni>Zn>Cr. The geo-accumulation index revealed that the soils were practically uncontaminated by Zn and Cu at all distances, moderately polluted by Cd and Ni at 1000 m and 2000 m and strongly polluted with Cd at a distance of 200 m. The Contamination factor results were consistent with the geo-accumulation index results. The pollutant load index (PLI) was found to be high but decreasing (1.37-0.49) as the distance from the flare point increased, indicating that the research region was polluted. In conclusion, the study's overall findings suggested that the soils were contaminated with heavy metals (particularly Cd) as a result of nearby gas flaring. As a result, the area must be appropriately monitored and managed to prevent future soil contamination by heavy metals to a level that is hazardous to human health.

Bioaccumulation and Health Risk Assessment of Potentially Toxic Metals in Citrus Limetta & Citrus Sinensis Irrigated by Wastewater.

The aim of this study was to evaluate the impact of different irrigation sources on the levels of potentially toxic metals (Cd, Cr, Fe and Mn) in the edibles of citrus fruits (Citrus sinensis and Citrus limetta). The samples of fruit, soil and water were collected from two locations (fresh water irrigated-FW I and sewage water irrigated-SW II) within the city of Sargodha. The samples utilized in the study for metal analysis were prepared utilizing the wet acid digestion method. Metal determination was performed using Atomic Absorption Spectrometry (AAS). The potentially toxic metal values in the citrus samples ranged from 0.010 to 0.063, 0.015 to 0.293, 6.691 to 11.342 and 0.366 to 0.667mg/kg for Cd, Cr, Fe and Mn, respectively. Analysis of Citrus limetta and Citrus sinensis indicated that the highest concentration of Cr, Fe and Mn is observed at the sewage water irrigation site (SW-II), whilst the minimum levels of Cr, Fe and Mn were observed at the fresh water irrigation site (FW-I). The results show that the levels of these metals in soil and fruit samples meet the acceptable guidelines outlined by USEPA and WHO. It was found that the metal pollution constitutes a potential threat to human health due to the HRI values for Cd, Cr, and Fe being above 1, despite the DIM values being below 1. Regular monitoring of vegetables irrigated with wastewater is highly recommended in order to minimise health risks to individuals.

Kinetic and Mechanistic Modelling of Pyrimethanil Fungicide Adsorption onto Soils of Varying Physico-chemical Properties.

Pesticide transport in the environment is impacted by the kinetics of its adsorption onto soil. The adsorption kinetics of pyrimethanil was investigated in ten soil samples of varying physicochemical properties. The highest adsorption was in the soil having the maximum silt and CaCO3 contents, pH and electrical conductance but the lowest amorphous Fe oxides and CaCl2 extractable Mn. Pseudo-second order kinetics and intra-particle diffusion model best accounted the adsorption kinetics of pyrimethanil. The equilibrium adsorption estimated by pseudo-second order kinetics (q02) was significantly and positively correlated with CaCl2 extractable Cu content (r = 0.709) while rate coefficient (k02) had a negative correlation with crystalline iron oxides content (r = -0.675). The intra-particle diffusion coefficient (ki.d.) had inverse relationship with CaCl2 extractable Mn content in soils (r = -0.689). FTIR spectra showed a significant interaction of pyrimethanil with micronutrient cations. Adsorption kinetic parameters of pyrimethanil could be successfully predicted by soil properties. The findings may help to evolve fungicide management decisions.

Benchmarking long-read sequencing strategies for obtaining ASV-resolved rRNA operons from environmental microeukaryotes.

The use of short-read metabarcoding for classifying microeukaryotes is challenged by the lack of comprehensive 18S rRNA reference databases. While recent advances in high-throughput long-read sequencing provide the potential to greatly increase the phylogenetic coverage of these databases, the performance of different sequencing technologies and subsequent bioinformatics processing remain to be evaluated, primarily because of the absence of well-defined eukaryotic mock communities. To address this challenge, we created a eukaryotic rRNA operon clone-library and turned it into a precisely defined synthetic eukaryotic mock community. This mock community was then used to evaluate the performance of three long-read sequencing strategies (PacBio circular consensus sequencing and two Nanopore approaches using unique molecular identifiers) and three tools for resolving amplicons sequence variants (ASVs) (USEARCH, VSEARCH, and DADA2). We investigated the sensitivity of the sequencing techniques based on the number of detected mock taxa, and the accuracy of the different ASV-calling tools with a specific focus on the presence of chimera among the final rRNA operon ASVs. Based on our findings, we provide recommendations and best practice protocols for how to cost-effectively obtain essentially error-free rRNA operons in high-throughput. An agricultural soil sample was used to demonstrate that the sequencing and bioinformatic results from the mock community also translates to highly diverse natural samples, which enables us to identify previously undescribed microeukaryotic lineages.

Soil hydro-physical variables and crop residues determinate runoff, soil loss, and glyphosate and AMPA concentration in the aqueous phase under simulated rainfall events.

Soil structural degradation and water erosion processes were observed even in no-tillage schemes in the Pampas region. Within these conservation systems, agrochemical application per hectare is one of the highest globally. Thus, this entails a serious risk of water contamination. The objectives of this study were to (1) test the hypothesis that the hydrological dynamics and sediment concentration related to surface runoff were conditioned by soil structure regardless of the presence of maize (Zea mays L.) crop residue and (2) assess the incidence of maize crop residue on glyphosate and aminomethylphosphonic acid (AMPA) concentration in runoff. The soil under study corresponded to Arroyo Dulce Series (Typic Argiudoll silty loam soil). Rain simulations were performed in the laboratory on undisturbed soil samples. Total runoff and infiltration rate were similar between treatments with C(+) and without C(-) maize crop residues (C(+) 1381.40mL and 14.27mm h-1, C(-): 1529.70mL and 21.67mm h-1). The C(-) treatments showed a higher sediment concentration than C(+) (1.58 and 0.42g 100mL-1, respectively). Glyphosate and AMPA average values in runoff were 15.9 and 33.9µg L-1. High variability of the hydro-physical properties and occurrence of soil structure, particularly platy ones, were detected. The hydrological variables were conditioned mainly by the occurrence of platy structures regardless of crop residue presence. Glyphosate concentration was increased in the first runoff event by the presence of corn residues, while AMPA concentrations were higher in the second runoff event in both residue treatments. In this study, maize residue on the soil surface protected the soil from sediment detachment but did not change runoff or infiltration. Thus, the implementation of agricultural management practices that promote vegetative residue cover has shown positive results to erosion.

Assessing Soil and Land Suitability of an Olive–Maize Agroforestry System Using Machine Learning Algorithms

Exponential population increases are threatening food security, particularly in mountainous areas. One potential solution is dual-use intercropped agroforestry systems such as olive (Olea europaea)–maize (Zea mays), which may mitigate risk by providing multiple market sources (oil and grain) for smallholder producers. Several studies have conducted integrated agroforestry land suitability analyses; however, few studies have used machine learning (ML) algorithms to evaluate multiple variables (i.e., soil physicochemical properties and climatic and topographic data) for the selection of suitable rainfed sites in mountainous terrain systems. The goal of this study is therefore to identify suitable land classes for an integrated olive–maize agroforestry system based on the Food and Agriculture Organization (FAO) land suitability assessment framework for 1757 km2 in Khyber Pakhtunkhwa province, Pakistan. Information on soil physical and chemical properties was obtained from 701 soil samples, along with climatic and topographic data. After determination of land suitability classes for an integrated olive–maize-crop agroforestry system, the region was then mapped through ML algorithms using random forest (RF) and support vector machine (SVM), as well as using traditional techniques of weighted overlay (WOL). Land suitability classes predicted by ML techniques varied greatly. For example, the S1 area (highly suitable) classified through RF was 9%↑ than that of SVM, and 8%↓ than that through WOL. The area of S2 (moderately suitable) classified through RF was 18%↑ than that of SWM and was 17%↓ than the area classified through WOL; similarly, the S3 (marginally suitable) class area via RF was 27%↓ than that of SVM, and 45%↓ than the area classified through WOL. Conversely, the area of N2 (permanently not suitable class) classified through RF and SVM was 6%↑ than the area classified through WOL. Model performance was assessed through overall accuracy and Kappa Index and indicated that RF performed better than SVM and WOL. Crop suitability limitations of the study area included high elevation, slope, pH, and large gravel content. Results can be used for sustainable intensification in mountainous rainfed regions by expanding intercrop agroforestry systems in developing nations to close yield gaps.

Morphological and Physico-chemical Properties of Soils of Amtur-3 Micro-Watershed on Schistose Landscape in Bailhongal taluk of Belagavi District, Karnataka, India

Aims: To assess the morphological and physico-chemical properties of two soil series viz., KKT (Kabulayathkatti tanda) and SDH (Singadahalli) of Amtur-3 micro-watershed developed on schistose landscape in northern transition zone of Karnataka. Place and Duration of Study: The study was carried out in the Amtur-3 micro-watershed (4D5B8t04) located in Bailhongal taluk of Belagavi district, Karnataka during 2022-2024. Methodology: Horizon-wise soil samples were collected from the two representative pedons viz., KKT (Kabulayathkatti tanda) and SDH (Singadahalli) soil series, were identified, characterized and classified up to family level according to revisions in Soil Taxonomy using morphological, physical and chemical properties. Results: The soils of these two series were sandy clay loam to clay in texture, neutral in soil reaction and had low salt content. Calcium and magnesium were the dominant cations followed by sodium and potassium. Both the soil series belonged to the order Inceptisol.

Correction: Certification of the total element mass fractions in UME EnvCRM 03 soil sample via a joint research project

Correction: Certification of the total element mass fractions in UME EnvCRM 03 soil sample via a joint research project

Estimation of Soil Moisture from Multispectral Remote Sensing Data

Soil moisture is an important parameter in agricultural and environmental studies and affects the exchange of water and energy at the boundary between the earth’s surface and the atmosphere. Accurate estimation of spatial-temporal changes in soil moisture is critical for numerous studies in the agricultural sciences. Vegetation indices, based on combinations of digital data of reflected light in the visible and near-infrared range, are suitable for the detection of water stress in plants. Therefore, they are widely used to monitor and detect drought conditions, but their accuracy is dependent on different vegetation types. The main objective of this research was to develop a novel procedure for the estimation of soil moisture using multispectral remote measurements. This study has been done using a multispectral camera Survey 3W Red+Green+NIR, which records images in three spectral channels: green (550 nm), red (660 nm) and near-infrared (850 nm). Eleven soil samples with different water content were investigated. SNAP (Sentinel Application Platform) software was used to process the captured multispectral images. It allows an easy calculation of various vegetation indices. The suitability of the normalized difference vegetation index (NDVI) for the assessment of soil moisture was evaluated. The average NDVI values did not indicate a well-established trend in relation to the SWC. A new simple vegetation index NIR/Green was successfully used for the assessment of soil moisture. The new NIR/Green index gives consistent results in relation to the real soil water content and could be used for mapping of the soil moisture with multispectral cameras.

Radioactive glassy inclusions in the soil sampled at the “Taiga” peaceful underground nuclear explosions site (the Perm region, Russia)

Activities of gamma-emitting radionuclides were measured in glassy inclusions (particles) found in soil samples from the “Taiga” peaceful nuclear explosions site (the Perm region, Russia). The measurements were performed using a stationary semiconductor gamma spectrometer. Activity concentrations were determined for the following technogenic radionuclides: 60Co, 94Nb, 137Cs, 152Eu, 154Eu, 155Eu, and 241Am. The activity concentrations of 241Am in the glassy inclusions were one to two orders of magnitude higher compared to the level of minimum significant activity concentration (1 Bq/g for 241Am) established by the Russian Radiation Safety Standards “NRB-99/2009”. Earlier, exceeding this level for the 241Am activity concentration in the native (unfractionated) soil samples from the “Taiga” site was reported by other researchers. In accordance with current Russian legislative and regulatory provisions regarding use of nuclear charges for peaceful purposes, the soil and radioactive glassy inclusions found in the soil correspond to the category of special radioactive waste. Considering the long half-life of 241Am (432 years), radiologically significant contamination by this radionuclide will persist at the “Taiga” site for the foreseeable future.

Soil legacy phosphorus and loss risk in subtropical grasslands

The accumulation of soil legacy phosphorus (P) due to past fertilization practices poses a persistent challenge for agroecosystem management and water quality conservation. This study investigates the spatial distribution and risk assessment of soil legacy P in subtropical grasslands managed for cow-calf operations in Florida, with two pasture types along the intensity gradient: improved vs semi-native pastures. Soil samples from 1438 locations revealed substantial spatial variation in soil legacy P, with total P concentrations ranging from 11.46 to 619.54 mg/kg and Mehlich-1 P concentrations spanning 0.2–187.27 mg/kg. Our analyses revealed that most of the sites in semi-native pastures may function as P sinks by exhibiting positive Soil P Storage Capacity (SPSC) values, despite having high levels of soil total P. These locales of higher SPSC values were associated with high levels of aluminum, iron, and organic matter that can adsorb P. In addition, our results from spatial random forest modelling demonstrated that factors including elevation, soil organic matter, available water storage, pasture type, soil pH, and soil order are important to explain and predict spatial variations in SPSC. Incorporating SPSC into the Phosphorus Index (PI) spatial assessment, we further determined that only 3% of the study area was considered as high or very high PI categories indicative of a significant risk for P loss. Our evaluation of SPSC and PI underscores the complexity inherent in P dynamics, emphasizing the need for a holistic approach to assessing P loss risk. Insights from this work not only help optimize agronomic practices but also promote sustainable land management, thus ensuring the long-term health and sustainability of grass-dominated agroecosystems.

Herbicidal Effects of Pyroligneous Acid for Control in Weed Seed Bank

Aims: Pyroligneous liquor, a by-product extracted from wood pyrolysis during charcoal production, is mainly discarded. Pyroligneous liquor has a phytotoxic effect and can be used environmentally as an herbicide of natural and sustainable origin for plant control. The objective of this research was to evaluate the effectiveness of pyroligneous liquor to control the plant seed bank. Study Design: Different concentrations of pyroligneous liquor (0, 1, 2, 3, 4, 5, 10, 15, 20, 25, 50, 75, 100% (v/v)) were tested in soil samples with 10 replications each. Statistical analysis of the data found was carried out using the OriginPro 2018 software, employing a nonlinear regression model. Place and Duration of Study: The experiment was carried out in the Federal University of Tocantins, Gurupi – To, Brazil. Soil collection and formal analyzes carried out between January 2023 and August 2023. Methodology: The soil was collected with the aid of a digger, with five subsamples within the useful area of ​​the plot and constituted a composite sample. After collection, samples from the Seed Banks were separated to quantify the seeds present in the soil seed bank, the other half of the sample, the soil was divided into 10 gerbox boxes for each treatment and benches were placed with natural light and kept under irrigation to stimulate germination. Throughout the experiment, temperature and relative humidity were monitored, remaining on average at 26.4°C and 73.5%, respectively. From the pyroligneous liquor obtained, dilutions were made with distilled water at liquor concentrations 0, 1, 2, 3, 4, 5, 10, 15, 20, 25, 50, 75, 100%(v/v) that were used in the treatments. Results: Higher pyroligneous liquor concentrations inhibited seed germination, while lower concentrations had less impact. Conclusion: These findings suggest that pyroligneous liquor can be used to control of weed seed bank.