Under the background of global change, increasing attention has been paid to the changes of benthic habitats in shallow ocean ecosystems (e.g., seagrass beds and coral reefs). Optical satellite remote sensing via both active and passive methods plays an important role in monitoring the health of benthic habitats by retrieving benthic reflectance spectra, but it remains difficult to accurately retrieve benthic reflectance spectra from only active or passive remote sensing because of the coupling between water column scattering and benthic reflectance. Here, we developed a semi-analytical model to retrieve benthic reflectance spectra in Case-I waters by combining active lidar and passive high-resolution imagery. Based on two-stream radiative transfer theory, the analytical relationship among the remote sensing reflectance (Rrs) and water column reflectance (Rw), benthic reflectance (Rb), diffuse attenuation coefficient (Kd), and water depth was established. The lidar data at a certain wavelength were applied to derive the water depth and the chlorophyll concentration (chl) along the lidar track. Then, the values of Kd at different wavelengths were estimated from the derived chl. In addition, we established a look-up-table (LUT) for the relationship between Rw and chl and water depth using Hydrolight simulation, and the Rw values at different wavelengths were then estimated by the lidar-derived chl and water depth. Finally, Rb(λ) values at different wavelengths along the lidar track were retrieved from the Rrs(λ) values observed by passive high-resolution imagery and the values of Rw(λ), Kd(λ), and water depth derived by lidar observation. The accuracy of the model was verified by using the Hydrolight simulated datasets, and the high correlation coefficient (R) revealed promising model performance for different benthic habitats, e.g., R > 0.9 for typical clean shallow water (chl = 0.5 mg/m3, H < 4 m) for the wavelength range of 400–640 nm. The model was further applied to real satellite data from ICESat-2 lidar and passive high-resolution satellite imagery (multispectral imagery of Sentinel-2 and hyperspectral imagery of Zhuhai−1) at two different benthic habitat sites (seagrass beds in Xincun Bay and coral reefs in the Huaguang Reef) in the South China Sea, and the results revealed that the model could reproduce the benthic spectra in both magnitude and shape. Overall, the proposed model can reliably yield benthic reflectance spectra along the lidar track without any requirement on prior knowledge, which should be beneficial for further benthic habitat health monitoring.
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