Ring Interactions Research Articles

Synthesis, crystal structure and Hirshfeld surface analysis of 2-{4-[(2-chlorophenyl)methyl]-3-methyl-6-oxopyridazin-1-yl}-N-phenylacetamide

In the title molecule, C20H18ClN3O2, the 2-chlorophenyl group is disordered to a small extent [occupancies 0.875 (2)/0.125 (2)]. The phenylacetamide moiety is nearly planar due to a weak, intramolecular C—H...O hydrogen bond. In the crystal, N—H...O hydrogen bonds and π-stacking interactions between pyridazine and phenyl rings form helical chains of molecules in the b-axis direction, which are linked by C—H...O hydrogen bonds and C—H...π(ring) interactions. A Hirshfeld surface analysis was performed, which showed that H...H, C...H/H...C and O...H/H...O interactions to dominate the intermolecular contacts in the crystal.

Unusual Metal–organic Multicomponent Ni(II) and Mononuclear Zn(II) Compounds Involving Pyridine dicarboxylates: Supramolecular Assemblies and Theoretical Studies

In the present work, we reported the synthesis and characterization [single crystal X-ray diffraction technique, spectroscopic, etc.] of two new Ni(II) and Zn(II) coordination compounds, viz. [Ni(2,6-PDC)2]2[Ni(en)2(H2O)2]2[Ni(en)(H2O)4]·4H2O (1) and [Zn(2,6-PDC)(Hdmpz)2] (2) (where 2,6-PDC = 2,6-pyridinedicarboxylate, en = ethylene-1,2-diamine, and Hdmpz = 3,5-dimethyl pyrazole). Compound 1 is found to crystallize as a multicomponent Ni(II) compound with five discrete complex moieties, whereas compound 2 is isolated as a mononuclear Zn(II) compound. A deep analysis of the crystal structure of 1 unfolds unusual dual enclathration of guest complex cationic moieties within the supramolecular host cavity stabilized by anion–π, π-stacking, N–H⋯O, C–H⋯O, and O–H⋯O hydrogen bonding interactions. Again, the crystal structure of compound 2 is stabilized by the presence of unconventional C–H⋯π(chelate ring) interactions along with C–H⋯O, C–H⋯N hydrogen bonding, π-stacking, and C–H⋯π(pyridyl) interactions. These non-covalent interactions were further studied theoretically using density functional theory (DFT) calculations, molecular electrostatic potential (MEP) surfaces, non-covalent interaction (NCI) plot index, and quantum theory of atoms in molecules (QTAIM) computational tools. The computational study displays that π-stacking or H bonds greatly tune the directionality of compound 1, although non-directional electrostatic forces dominate energetically. For compound 2, a combined QTAIM/NCI plot analysis confirms the presence of unconventional C–H⋯π(chelate ring) interactions along with other weak interactions obtained from the crystal structure analysis. Further, the individual energy contributions of these weak yet significant non-covalent interactions have also been determined computationally.

Crystal structure and Hirshfeld surface analyses, crystal voids, intermolecular interaction energies and energy frameworks of 3-benzyl-1-(3-bromopropyl)-5,5-diphenylimidazolidine-2,4-dione

The title molecule, C25H23BrN2O2, adopts a cup shaped conformation with the distinctly ruffled imidazolidine ring as the base. In the crystal, weak C—H...O hydrogen bonds and C—H...π(ring) interactions form helical chains of molecules extending along the b-axis direction that are linked by additional weak C—H...π(ring) interactions across inversion centres. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions for the crystal packing are from H...H (51.0%), C...H/H...C (21.3%), Br...H/H...Br (12.8%) and O...H/H...O (12.4%) interactions. The volume of the crystal voids and the percentage of free space were calculated to be 251.24 Å3 and 11.71%, respectively, showing that there is no large cavity in the crystal packing. Evaluation of the electrostatic, dispersion and total energy frameworks indicate that the stabilization is dominated by the dispersion energy.

Investigation of synthesis, spectroscopic characterization, crystal structure, and computational studies of 3-(4-(dimethylamino)phenyl)-1,5-di(thiophen-2- yl)pentane-1,5-dione as potent against Cathepsin S

The chief purpose of this work was to synthesize and characterize 3-(4-(dimethylamino)phenyl)-1,5-di(thiophen-2-yl)pentane-1,5-dione (4) whose structure was subsequently confirmed by single-crystal X-ray analysis. This molecule adopts a conformation approximating a three-bladed fan. In the crystal, C–H···O and C–H···S hydrogen bonds, together with C–H···π(ring) interactions form corrugated layers parallel to the bc plane. Electronic structure calculations were performed at the ωB97xd/def2tzvp level to explore the reactivity and topology of the molecule. Quantum theory of atoms in molecule (QTAIM) and NBO studies provide bonding characteristics and the extent of charge transfer with orbital energies computed from FMO theory together with optical and nonlinear optical (NLO) properties. A Hirschfeld surface analysis was performed to explore the nature of interactions in the crystal packing and the dispersion interactions were found to have a significant role in stabilizing the crystal structure. The H···H interactions are the most significant among the intermolecular interactions. Compound 4 was subjected to structural activity relationship analysis and exhibited potency against Cathepsin S. Molecular docking and molecular dynamics analysis were carried out to understand the binding interaction mechanism and stability of 4 in its complex with Cathepsin S.

Shock wave interaction with a naturally generated vortex ring

The vortex ring is usually analytically modeled in computational studies involving vortex ring and shock wave interaction. However, incompressibility assumptions of the isolated vortex ring model mostly limits its applicability to the lower Mach number regime. To overcome this limitation, a compressible vortex ring is generated using a pulse jet exiting a circular nozzle, and its interaction with a shock wave is analyzed. The shock–vortex interaction and resulting sound wave generation is simulated by solving the compressible axisymmetric Navier–Stokes equations. A characteristics-based filter is used to isolate acoustic and hydrodynamic disturbances in the flow field. A reconfigured computational domain is used to negate the aftereffects of the nozzle on the flow field. The strong interaction of compressible vortex rings at higher Mach numbers with different shock wave Mach numbers in the flow field is studied including resultant acoustic wave generation.

Crystal structure, Hirshfeld surface analysis, and calculations of inter-molecular inter-action energies and energy frameworks of 1-[(1-hexyl-1H-1,2,3-triazol-4-yl)meth-yl]-3-(1-methyl-ethen-yl)-benzimidazol-2-one.

The benzimidazole moiety in the title mol-ecule, C19H25N5O, is almost planar and oriented nearly perpendicular to the triazole ring. In the crystal, C-H⋯O hydrogen bonds link the mol-ecules into a network structure. There are no π-π inter-actions present but two weak C-H⋯π(ring) inter-actions are observed. A Hirshfeld surface analysis of the crystal structure indicates that the most important contributions for the crystal packing are from H⋯H (62.0%), H⋯C/C⋯H (16.1%), H⋯N/N⋯H (13.7%) and H⋯O/O⋯H (7.5%) inter-actions. Evaluation of the electrostatic, dispersion and total energy frameworks indicate that the stabilization is dominated via the dispersion energy contributions in the title compound.

STEAM INDUCED SHOCKWAVE INTERACTION WITH A SUBMERGED PLATE CONFIGURED AT A RANGE OF INCLINATIONS FROM VERTICAL

Interaction of shock wave and the shear induced vortex across the steam-water layer has been vital in several transportation and chemical industrial processes. Experiments were conducted using a facility including a rectangular chamber, which housed a shock tube in it. Steam was injected into the tube to induce shock wave by bursting the Aluminum diaphragm disk and the shock wave surrounding by the steam-water shear layer induced vortex, exited the shock tube and struck the rectangular steel plate. PIV setup along with the pressure and acoustic emissions sensors were used to characterize the propagation and impingement of the shock wave on the plate as well as the behavior of the reflected shock wave and the vortex ring. In case of a vertical rectangular steel sheet stationed in front of the exit of the shock tube, the central part of the shock wave was found to interact with the central part of the vortex structure and the external part of the shock wave came into contact with the outer part of the vortex structure. Whereas in case of inclined sheet, the shockwave reflected from the sheet, came into collision with the rebound shockwave as well as with the lower portion of the vortex ring largely. However, with the further variation in the angle of inclination (i.e. 30o and larger) fromvertical axis, no further appreciable change was observed in the flow profile except the vortex ring interacted earlier with the rebounded shockwave in the lower region within the neighborhood of the plate than the interaction of the vortex ring with the rebounded shock wave in the upper region of the inclined plate. The pressure and acoustic emission measurements were symmetric with the vertical plate, however, the pressure data was asymmetric when the plate was inclined from vertical. When the angle of inclination changes to 30 degrees from the vertical, the flow becomes more asymmetric as the shockwave and the consequent vortices impinged on the surface of the plate much earlier than the 15 degrees’ inclination case.

Investigation of Chrysene heterodimers complexes potential energy surface using ab initio computational methods

Numerous chemical and biological entities are greatly impacted by non-covalent interactions in terms of their stability and structure. One such example is the interaction of aromatic rings. These interactions are highly valued in the domains of astrochemistry, biology, chemistry, biochemistry, and material science. The main goals of this study are to explore the Potential Energy Surface (PES) of Chrysene (Chy) heterodimers, identify the most stable configurations among the Chy-Bz, Chy-Np, and Chy-Anth heterodimer complexes, and analyze the inter-molecular interactions between these molecules. This analysis was conducted utilizing ab initio computational techniques. On their PES, the Chy-Np heterodimer exhibited four minima, while the Chy-Bz and Chy-Anth heterodimer complexes showed three. Compared to conformers oriented perpendicularly, co-facial arrangement conformers in Chy heterodimer complexes have stable structures. The global minimum structure of Chy-Bz has been determined to be the face isomer, while Chy-Np and Chy-Anth have global minimum structures of the cross isomer. The binding energies of the structures generated by MP2 are higher than those of DFT-D3, DFT-D4, and SCS-MP2. Optimized geometries and binding energies of larger hydrocarbon aromatic systems are explained in detail by B3LYP-D3 and the recently created B3LYP-D4.

Two-Dimensional Correlation Spectroscopy (2D-COS) Tracking of the Formation of Selected Transition Metal Compounds Cu(II) and Cd(II) With Cinchonine and Their Impact on Model Components of Erythrocytes.

Cinchonine is a quinoline alkaloid known for its antimalarial properties. Due to the advantages of using compounds of metal ions with alkaloids, a copper(II) compound with cinchonine was synthesized, and, for comparative purposes, a cadmium(II) compound with cinchonine. During the synthesis, the emerging interactions between the metal ion and cinchonine were studied. After crystallization, it was examined how the obtained compounds would interact with the model blood component, hematoporphyrin IX. Ultraviolet-visible (UV-Vis) spectroscopy, Raman spectroscopy, and attenuated total reflection Fourier transform infrared spectroscopy (ATR FT-IR) were used in the study. In the case of monitoring the synthesis, the best method turned out to be UV-Vis spectroscopy, combined with the possibility of two-dimensional correlation spectroscopy (2D-COS), which enabled the identification of peaks characteristic of the interactions of the cinchonine quinoline ring with metal ions. In turn, the obtained Raman spectra showed shifts of individual bands and changes in their intensity, and 2D-COS showed the sequence of formation of individual interactions, which confirmed the formation of cinchonine compounds with metals. ATR FT-IR also allowed us to compare the spectra of the substrates used in the synthesis with the crystallized compounds and thus confirm the formation of the expected compounds. Bands characteristic of π-π-stacking interactions between the quinoline ring and the tetrapyrrole ring of hematoporphyrin IX were also observed. Observed interaction with a model blood component may be important when designing drugs for antimalarial therapy.

Polystyrene Chain Geometry Probed by Ion Mobility Mass Spectrometry and Molecular Dynamics Simulations.

Polystyrene (PS) is a thermoplastic polymer commonly used in various applications due to its bulk properties. Designing functional polystyrenes with well-defined structures for targeted applications is of significant interest due to the rigid and apolar nature of the polymer chain. Progress is hindered to date by the limitations of current analytical methods in defining the atomistic-level folding of the polymer chain. The integration of ion mobility spectrometry and molecular dynamics simulations is beneficial in addressing these challenges. However, data on gas-phase polystyrene ions are rarely reported in the literature. We herein investigate the gas phase structure of polystyrene ions with different end groups to establish how the nature and the rigidity of the monomer unit affect the charge stabilization. We find that, in contrast to polar polymers in which the charges are located deep in the ionic globules, the charges in the PS ions are rather located at the periphery of the polymer backbone, leading to singly and doubly charged PS ions adopting dense elliptic-shaped structures. Molecular dynamics (MD) simulations indicate that the folding of the PS rigid chain is controlled by phenyl ring interactions with the charge ultimately remaining excluded from the core of the globular ions, whereas the folding of polyether ions is initiated by the folding of the flexible polyether chain around the sodium ion that remains deeply enclosed in the core of the ions.

Design and Synthesis of 3-(Phenylsulfonamido)benzamide Derivatives as Potent Carbonic Anhydrase IX Inhibitors: Biological Evaluations and Molecular Modeling Studies

Introduction: Carbonic anhydrase IX (CAIX) is known to be overexpressed in various tumors and plays a significant role in tumor development and progression. Methods: A series of 3-(benzylsulfonamido)benzamides derivatives was synthesized and tested for their CAIX inhibitory activities. The two most active compounds were subjected to cytotoxicity testing against a panel of 60 cancer cell lines. Results: Many of the synthesized compounds successfully inhibited CAIX activities, exhibiting IC50 values in the low nanomolar range. The most potent CAIX inhibitor was compound 14, with an IC50 of 140 nM. Structure-activity relationship analysis of the synthesized compounds supported with molecular docking revealed strong coordination of sulfonamide moiety with the catalytic Zn2+ metal, hydrophobic interactions of the benzylsulfonamido ring with a hydrophobic pocket, and π- stacking interactions of the aryl ring with an aromatic surface. The two most active analogues (10 and 14) were further tested for their antiproliferative activities in the NCI-60 human tumor cell lines. Notably, compound 14 demonstrated potent growth inhibitory effects against several cancer cell lines. Conclusion: The synthesized analogues represent a novel scaffold for the treatment of different types of cancer by targeting CAIX.

Synthesis, crystal structure and Hirshfeld surface analysis of 1-[(1-octyl-1H-1,2,3-triazol-4-yl)methyl]-3-phenyl-1,2-di-hydro-quinoxalin-2(1H)-one.

In the title mol-ecule, C25H29N5O, the di-hydro-quinoxaline unit is not quite planar (r.m.s. deviation = 0.030 Å) as there is a dihedral angle of 2.69 (3)° between the mean planes of the constituent rings and the mol-ecule adopts a hairpin conformation. In the crystal, the polar portions of the mol-ecules are associated through C-H⋯O and C-H⋯N hydrogen bonds and C-H⋯π(ring) and C=O⋯π(ring) inter-actions, forming thick layers parallel to the bc plane and with the n-octyl groups on the outside surfaces.

Phenytoin from antiepileptic to covid-19: Synthesis, crystal structure, DFT, HSA, MEP and green biological study of phenytoin derivative as potential covid-19 drug candidates

That's an interesting point! Phenytoin's potential in reducing cognitive deficits during COVID-19 is indeed intriguing. Its established status as an approved antiepileptic medication could lend credibility to exploring its effects on cognitive function in COVID-19 patients. This dual functionality could provide a unique angle for research and potential therapeutic interventions. This study reports the synthesis, characterization and importance of a new phenytoin derivative PD, C23H24N4O5. A biological molecular modelling study using a computer-aided tool, which is a clean technique of PD compared to the approved Phenytoin anti-COVID-19 drugs, was achieved. Docking the three compounds into 7JQ0 of COVID-19 Mpro showed the potential capability of PD compared to Phenytoin and the inhibitor. Binding affinity, for example, was -7.3, -6.9 and -6.6 kcal/mol, respectively. Noticeably, PD interacted with 75 % of the essential functional Mpro amino acids, such as G143 and H164, M49, C145, M165 and E166, comparable to the standards used. Further interesting findings that predicted compound toxicity and drug-likeness also found that PD was less toxic and bio-available as a drug than Phenytoin and the inhibitor. Superposition of our ligand PD against Phenytoin and the Inhibitor docked into7JQ0 using the same parameters showed similar interactions in the amino acid cavity, enhancing the possibility of PD being an anti-COVID-19 drug. The free computer-aided methods were used to significantly speed up the initial stages of drug discovery by narrowing down potential candidates for further laboratory testing.This compound adopts an L-shaped conformation. The lone pairs on the ring nitrogen atoms participate in π bonding in the ring. In the crystal, a layer structure was generated by NH···N, NH···O and CH···O hydrogen bonds plus CH···π(ring) interactions. Theoretical studies of the compound were calculated using the density functional theory (DFT) method with a B3LYP 6–311++G(d,p) basis set. The geometrical parameters after optimization were compared with the experimental values. Molecular Electrostatic Potential (MEP) and Hirshfeld Surface Analysis (HSA) were studied to investigate intermolecular interactions. Frontier Molecular Orbitals (FMOs), which were Highest Occupied Molecular Orbital (HOMO) and Lowest Unoccupied Molecular Orbital (LUMO), were created, and the energy gap between these orbitals was calculated to understand the chemical stability of the molecule.

Surface methodology for optimized adsorption of hazardous organic pollutant from aqueous solutions via novel magnetic metal organic framework: Kinetics, isotherm study, and DFT calculations

An efficient way to remove Janus Green B (JGB) dye from contaminated water sources is using of magnetic cerium (III) metal–organic framework (MCe-MOF). Analytical methods such as PXRD, TEM, FESEM, FT-IR, PZC, and XPS were used in the characterization of the MCe-MOF microspheres in order to assess the phase, crystallinity, shape, surface characteristics, and chemical composition of the MCe-MOF material. Impressive physical characteristics of the synthesized MCe-MOF material included a high surface area of 1340.05 m2/g. Conversely, MCe-MOF’s magnetic saturation (MS) was measured at 36.47 emu.g−1. The purpose of the study was to determine if MCe-MOF could effectively remove JGB dye from wastewater by adsorption. Adsorption settings that were studied included pH, adsorbent dose, beginning dye concentration, contact time, and temperature. The JGB electrical characteristics, reactivity, and shape were ascertained through the application of density functional theory (DFT). The placement of electrophilic and nucleophilic attack sites is in good agreement with the molecular orbitals (HOMO and LUMO) and MEP results, according to DFT. Based on the findings, MCe-MOF had a high capacity for adsorbing JGB dye, with an adsorption data fit by pseudo-second-order kinetic models and the Langmuir isotherm. It was evident from the adsorption energy of 27.8 kJ.mol−1 that chemisorption was the mode of adsorption. The optimal conditions for attaining a high adsorption capacity were found to be pH 8 and 0.02 g of MCe-MOF dose. The adsorption process of JGB dye onto MCe-MOF was seen to be spontaneous, endothermic, and random, as indicated by the temperature-dependent increases in the thermodynamic parameters ΔGo, ΔHo, and ΔSo. The adsorption process was optimized through the application of Response Surface Methodology and Box-Behnken design (RSM, BBD). The successful removal of dyes from the MCe-MOF material was made possible by these methods. While π-π bonding happens through the interaction of aromatic rings, chemisorption entails the formation of chemical interactions between the adsorbate and adsorbent. Electrostatic interactions arise from the attraction or repulsion of charges between the adsorbate and adsorbent, and pore-filling happens when the adsorbate fills the adsorbent’s pores. For the removal of JGB dye from wastewater, MCe-MOF exhibits great potential as an adsorbent because of its numerous adsorption processes and high adsorption capacity.

Synthesis, Crystal Structure, Hirshfeld Surface Analysis, and Computational Approach of a New Pyrazolo[3,4-g]isoquinoline Derivative as Potent against Leucine-Rich Repeat Kinase 2 (LRRK2).

Ethyl-2-((8-cyano-3,5,9a-trimethyl-1-(4-oxo-4,5-dihydrothiazol-2-yl)-4-phenyl-3a,4,9,9a-tetrahydro-1H-pyrazolo[3,4-g]isoquinolin-7-yl)thio)acetate (5) was synthesized, and its structure was characterized by IR, MS, and NMR (1H and 13C) and verified by a single-crystal X-ray structure determination. Compound 5 adopts a "pincer" conformation. In the crystal, the hydrogen bonds of -H···O, C-H···O, and O-H···S form thick layers of molecules that are parallel to (101). The layers are linked by C-H···π(ring) interactions. The Hirshfeld surface analysis shows that intermolecular hydrogen bonding plays a more important role than both intramolecular hydrogen bonding and π···π stacking in the crystal. The intramolecular noncovalent interactions in 5 were studied by QTAIM, NCI, and DFT-NBO calculations. Based on structural activity relationship studies, leucine-rich repeat kinase 2 (LRRK2) was found to bind 5 and was further subjected to molecular docking studies, molecular dynamics, and ADMET analysis to probe potential drug candidacy.

Crystal structure determination and analyses of Hirshfeld surface, crystal voids, inter-molecular inter-action energies and energy frameworks of 1-benzyl-4-(methyl-sulfan-yl)-3a,7a-di-hydro-1H-pyrazolo-[3,4-d]pyrimidine.

The pyrazolo-pyrimidine moiety in the title mol-ecule, C13H12N4S, is planar with the methyl-sulfanyl substituent lying essentially in the same plane. The benzyl group is rotated well out of this plane by 73.64 (6)°, giving the mol-ecule an approximate L shape. In the crystal, C-H⋯π(ring) inter-actions and C-H⋯S hydrogen bonds form tubes extending along the a axis. Furthermore, there are π-π inter-actions between parallel phenyl rings with centroid-to-centroid distances of 3.8418 (12) Å. A Hirshfeld surface analysis of the crystal structure indicates that the most important contributions to the crystal packing are from H⋯H (47.0%), H⋯N/N⋯H (17.6%) and H⋯C/C⋯H (17.0%) inter-actions. The volume of the crystal voids and the percentage of free space were calculated to be 76.45 Å3 and 6.39%, showing that there is no large cavity in the crystal packing. Evaluation of the electrostatic, dispersion and total energy frameworks indicate that the cohesion of the crystal structure is dominated by the dispersion energy contributions.

Enhanced π-electron transport in graphitic carbon nitride (g-C3N4) by constructing biochar-welded donor-acceptor (D-A) configuration for photocatalytic conversion of biomass

g-C3N4 has broad prospects in photocatalytic upgrading of biomass but suffers from the large exciton binding energy and high charge recombination rate. Herein, we integrated the biomass-derived carbocyclic rings with heptazine units via π-conjugation, constructing biochar-welded electron donor (D)-acceptor (A) structures in g-C3N4. This structure can induce intrinsic driving forces that promoted electron delocalization and transport. Meanwhile, the interlayer π-π stacking interaction of the carbocyclic rings provided a channel for electrons to migrate on the vertically layered structure. The g-C3N4 with biochar-welded D-A configuration exhibited an improved yield of 87.52 % for xylonic acid from biomass monosaccharide. The mechanism study confirmed the dominant role of superoxide radicals (·O2-) and distinguished singlet oxygen (1O2) from the generation path, demonstrating the supporting role of 1O2 originated from an energy transfer process. This work proposed a universal strategy to construct g-C3N4-based photocatalysts with D-A configuration to achieve efficient photocatalytic reforming of biomass.

Synthesis, crystal structure and Hirshfeld surface analysis of 1-[3-(2-oxo-3-phenyl-1,2-dihydroquinoxalin-1-yl)propyl]-3-phenyl-1,2-dihydroquinoxalin-2-one

In the title compound, C31H24N4O2, the dihydroquinoxaline units are both essentially planar with the dihedral angle between their mean planes being 64.82 (4)°. The attached phenyl rings differ significantly in their rotational orientations with respect to the dihydroquinoxaline planes. In the crystal, one set of C—H...O hydrogen bonds form chains along the b-axis direction, which are connected in pairs by a second set of C—H...O hydrogen bonds. Two sets of π-stacking interactions and C—H...π(ring) interactions join the double chains into the final three-dimensional structure.

Crystal structure, Hirshfeld surface analysis, calculations of intermolecular interaction energies and energy frameworks and the DFT-optimized molecular structure of 1-[(1-butyl-1H-1,2,3-triazol-4-yl)methyl]-3-(prop-1-en-2-yl)-1H-benzimidazol-2-one

The benzimidazole entity of the title molecule, C17H21N5O, is almost planar (r.m.s. deviation = 0.0262 Å). In the crystal, bifurcated C—H...O hydrogen bonds link individual molecules into layers extending parallel to the ac plane. Two weak C—H...π(ring) interactions may also be effective in the stabilization of the crystal structure. Hirshfeld surface analysis of the crystal structure reveals that the most important contributions for the crystal packing are from H...H (57.9%), H...C/C...H (18.1%) and H...O/O...H (14.9%) interactions. Hydrogen bonding and van der Waals interactions are the most dominant forces in the crystal packing. Evaluation of the electrostatic, dispersion and total energy frameworks indicate that the stabilization of the title compound is dominated via dispersion energy contributions. The molecular structure optimized by density functional theory (DFT) at the B3LYP/6–311 G(d,p) level is compared with the experimentally determined molecular structure in the solid state.

Vibrational spectroscopic detection of radiation-induced structural changes in Chironomus hemoglobin

PurposeChironomus hemoglobin is known to exhibit higher gamma radiation resistance compared to human hemoglobin. In the present study, we have introduced a sensitive method to analyze radiation-induced alterations in Chironomus hemoglobin using Vibrational spectroscopy and further highlighting its potential for monitoring radiotoxicity in aquatic environments. Materials and methodsVibrational spectroscopic methods such as Raman and FT-IR spectroscopy were used to capture the distinctive chemical signature of Chironomus hemoglobin (ChHb) under both in vitro and in vivo conditions. Any radiation dose-dependent shifts could be analyzed Human hemoglobin (HuHb) as standard reference. ResultsDistinctive Raman peak detected at 930 cm-1 in (ChHb) was attributed to C–N stretching in the heterocyclic ring surrounding the iron atom, preventing heme degradation even after exposure to 2400 Gy dose. In contrast, for (HuHb), the transition from deoxy-hemoglobin to met-hemoglobin at 1210 cm-1 indicated a disruption in oxygen binding after exposure to 1200 Gy dose. Furthermore, while ChHb exhibited a consistent peak at 1652 cm-1 in FT-IR analysis, HuHb on the other hand, suffered damage after gamma irradiation. ConclusionThe findings suggest that vibrational spectroscopic methods hold significant potential as a sensitive tool for detecting radiation-induced molecular alterations and damages. Chironomus hemoglobin, with its robust interaction of the pyrrole ring with Fe, serves as a reliable bioindicator molecule to detect radiation damage using vibrational spectroscopic method.