System-justifying ideologies are a cluster of ideals that perpetuate a hierarchical social system despite being fraught with inequalities. Right-wing authoritarianism (RWA) and social dominance orientation (SDO) are two ideologies that have received much attention in the literature separately and together. Given that these ideologies are considered to be stable individual differences that are likely to have an evolutionary basis, there has yet to be any examination for volumetric brain structures associated with these variables. Here, we proposed an investigation of overlapping and non-overlapping brain regions associated with RWA and SDO in a sample recruited in Singapore. Indeed, it will be interesting to determine how RWA and SDO correlate in a country that proactively promotes institutionalized multi-culturalism such as Singapore. RWA and SDO scores were collected via self-report measures from healthy individuals (39 males and 43 females; age 25.89 ± 5.68 years). Consequently, voxel-based morphometry (VBM) whole brain and region of interest (ROI) analyses were employed to identify neuroanatomical correlates of these system-justifying ideologies. RWA and SDO scores were strongly correlated despite the low ideological contrast in Singapore's sociopolitical context. The whole brain analysis did not reveal any significant clusters associated with either RWA or SDO. The ROI analyses revealed clusters in the bilateral amygdala and ventromedial prefrontal cortex (vmPFC) that were associated with both RWA and SDO scores, whereas two clusters in the left anterior insula were negatively associated with only SDO scores. The study corroborates the claim of RWA and SDO as stable individual differences with identifiable neuroanatomical correlates, but our exploratory analysis suggests evidence that precludes any definitive conclusion based on the present evidence.