Relative Protein Content Research Articles

Covalent Attachment of Functional Proteins to Microfiber Surfaces via a General Strategy for Site-Selective Tetrazine Ligation.

Surface modification of materials with proteins has various biological applications, and hence the methodology for surface modification needs to accommodate a wide range of proteins that differ in structure, size, and function. Presented here is a methodology that uses the Affinity Bioorthogonal Chemistry (ABC) tag, 3-(2-pyridyl)-6-methyltetrazine (PyTz), for the site-selective modification and purification of proteins and subsequent attachment of the protein to trans-cyclooctene (TCO)-functionalized hydrogel microfibers. This method of surface modification is shown to maintain the functionality of the protein after conjugation with proteins of varying size and functionalities, namely, HaloTag, NanoLuc luciferase (NanoLuc), and fibronectin type III domains 9-10 (FNIII 9-10). The method also supports surface modification with multiple proteins, which is shown by the simultaneous conjugation of HaloTag and NanoLuc on the microfiber surface. The ability to control the relative concentrations of multiple proteins presented on the surface is shown with the use of HaloTag and superfolder GFP (sfGFP). This application of the ABC-tagging methodology expands on existing surface modification methods and provides flexibility in the site-selective protein conjugation methods used along with the rapid kinetics of tetrazine ligation.

Identification of salt tolerance of different Chinese kale cultivars under NaCl stress at seedling stage

In order to understand the salt tolerance of different Chinese kale varieties at seedling stage and screen out the varieties with strong salt tolerance at seedling stage, the seeds of 26 Chinese kale varieties were used as materials. The growth indexes, physiological indexes, seedling rate and salt damage index of different Chinese kale varieties were compared and cluster analyzed by means of tissue culture. The results showed that: (1) under 160 mmol∙L−1 NaCl stress, the different Chinese kale varieties at growth indexes, physiological indexes, seedling rate and salt damage index were significantly different, the relative seedling rate of R4, R14 and R32 reached 100.00%, and the salt damage index was the lowest, which was 20.00%; The correlation analysis showed that the relative seedling rate, the relative content of soluble protein, the relative content of soluble sugar and the relative value of Leaf SPAD were all negatively correlated with the salt damage index, and the relative conductivity and the relative content of malondialdehyde were all positively correlated with the salt damage index. (2) The average value of 14 salt tolerance indexes was used to cluster analyze the salt tolerance of 26 Chinese kale varieties. The tested materials were divided into four categories: high salt tolerance, moderate salt tolerance, low salt tolerance and salt sensitivity. R14, R25, R30 and R32 were highly salt tolerant varieties and R24 was salt sensitive varieties, which laid a foundation for further breeding and genetic research of salt tolerant varieties.

Compound extreme heat and drought stress alter the spatial gradients of protein and starch in wheat grains

The spatial gradients of protein and starch in wheat grains affected the grain milling characteristics and flour utilization. The increase in compound heat stress and drought stress (HDS) due to global climate change threatens wheat grain yield and quality parameters, but the impacts of extreme climate events on the gradients of protein and starch in wheat grains remain unclear. In this study, two-year, environment-controlled experiments with four heat stress levels (17/27, 21/31, 25/35, and 29/39°C) and three drought stress levels (30 %, 55 %, and 75 % field capacity) were conducted to investigate the effects of HDS on the gradients of protein and starch concentrations within the five grain layers. The results showed that HDS resulted in significantly greater protein concentrations, while resulting in lower starch concentrations in the wheat grain layers. Among the five layers, the endosperm layers exhibited the greatest increase in protein concentration under HDS, but the starch concentration under HDS decreased in the order of husk > aleurone > endosperm layer. HDS unevenly altered the protein and starch concentrations of the five grain layers. There was significant linear relationship between relative protein and starch concentration with accumulated heat degree days (AHDD). With a 1°C·d increase in AHDD, the protein concentration in the five grain layers increased by 1.17–2.19 %, while the starch concentration decreased by 0.62–0.90 %, depending on the drought stress levels. A significant linear relationship was also observed between the relative protein and starch concentrations and evapotranspiration (ET). A 1 mm increase in ET led to a protein concentration decrease of 0.58–0.76 % in P1-P5, with a corresponding starch concentration increase of 0.28–0.46 %, depending on cultivar and treatment stages. Our results indicate that HDS significantly impacts the grain quality parameters for the flour milling process and human diet and will provide important insights into adapting wheat quality to climate change.

Soft X-ray spectromicroscopy of human fibroblasts with impaired sialin function.

Salla disease (SD) is a lysosomal storage disease where free sialic acid (SA) accumulates in lysosomes due to the impaired function of a membrane protein, sialin. Synchrotron radiation-based scanning transmission soft X-ray spectromicroscopy (STXM) was used to analyze both SD patients' fibroblasts and normal human dermal fibroblasts (NHDF) from healthy controls. Both cell lines were also cultured with N-acetyl-d-mannosamine monohydrate (ManNAc) to see if it increased SA concentration in the cells. The STXM technique was chosen to simultaneously observe the morphological and chemical changes in cells. It was observed that free SA did not remain in the lysosomes during the sample processing, leaving empty vacuoles to the fibroblasts. The total cytosol and entire cell spectra, however, showed systematic differences between the SD and NHDF samples, indicating changes in the relative macromolecular concentrations of the cells. The NHDF cell lines contained a higher relative protein concentration compared to the SD cell lines, and the addition of ManNAc increased the relative protein concentration in both cell lines. In this study, two sample preparation methods were compared, resin-embedded thin sections and cells grown directly on sample analysis grids. While the samples grown on the grids exhibited clean, well-resolved spectra not masked by embedding resin, the low penetration depth of soft X-rays hindered the analysis to only the thin region of the microfilaments away from the thick nucleus.

Relationships between HDL subpopulation proteome and HDL function in overweight/obese people with and without coronary heart disease

Background and aimsThe structure-function relationships of high-density lipoprotein (HDL) subpopulations are not well understood. Our aim was to examine the interrelationships between HDL particle proteome and HDL functionality in subjects with and without coronary heart disease (CHD). MethodsWe isolated 5 different HDL subpopulations based on charge, size, and apolipoprotein A1 (APOA1) content from the plasma of 33 overweight/obese CHD patients and 33 age-and body mass index (BMI)-matched CHD-free subjects. We measured the relative molar concentration of HDL-associated proteins by liquid chromatography tandem mass spectrometry (LC-MS/MS) and assessed particle functionality. ResultsWe quantified 110 proteins associated with the 5 APOA1-containing HDL subpopulations. The relative molar concentration of these proteins spanned five orders of magnitude. Only 10 proteins were present in >1% while 73 were present in <0.1% concentration. Only 6 of the 10 most abundant proteins were apolipoproteins. Interestingly, the largest (α-1) and the smallest (preβ-1) HDL particles contained the most diverse proteomes. The protein composition of each HDL subpopulation was altered in CHD cases as compared to controls with the most prominent differences in preβ-1 and α-1 particles. APOA2 concentration was positively correlated with preβ-1 particle functionality (ABCA1-CEC/mg APOA1 in preβ-1) (R2 = 0.42, p = 0.005), while APOE concentration was inversely correlated with large-HDL particle functionality (SRBI-CEC/mg APOA1 in α-1+α-2) (R2 = 0.18, p = 0.01). ConclusionsThe protein composition of the different HDL subpopulations was altered differentially in CHD patients. The functionality of the small and large HDL particles correlated with the protein content of APOA2 and APOE, respectively. Our data indicate that distinct particle subspecies and specific particle associated proteins provide new information about the role of HDL in CHD.

Evaluation of Foliar Application of &lt;i&gt;Elusine indica&lt;/i&gt; Extract on Growth, Photosynthesis, and Osmoprotectant Contents in Maize under Drought Stress

To investigate the effects of foliar application of different concentrations of &lt;i&gt;Elusine indica&lt;/i&gt; extract (EIE) on growth, photosynthesis, and osmoprotectant contents in maize under drought stress. The weed powder was extracted using methanol, followed by a solid-liquid extraction procedure. Plants were sprayed with three different concentrations of EIE at 1, 3, and 5 g/L and morphological parameters, chlorophyll, relative water content (RWC), soluble sugar, proline, protein, glutathione (GSH), and malondialdehyde (MDA) contents were determined. The results showed that drought stress led to a decline in morphological characteristics, RWC and soluble sugar and increased proline, protein, GSH, and MDA contents. However, foliar application of EIE significantly improved plant height, fresh and dry weight, chlorophyll content, RWC, soluble sugar, and GSH, while the proline level was diminished compared to drought treatment. Soluble sugar showed a significant positive correlation with fresh and dry weight (&lt;i&gt;r&lt;/i&gt; = 0.742 and 0.783, &lt;i&gt;p&lt;/i&gt; &lt; 0.01) and a strong negative correlation with MDA (&lt;i&gt;r&lt;/i&gt; = -0.459, &lt;i&gt;p&lt;/i&gt; &lt; 0.05). Therefore, this result indicated that EIE can be used as an inexpensive and environmentally friendly biostimulant to help plants enhance tolerance to drought.

Identification of brain-enriched proteins in CSF as biomarkers of relapsing remitting multiple sclerosis

BackgroundMultiple sclerosis (MS) is a clinically and biologically heterogenous disease with currently unpredictable progression and relapse. After the development and success of neurofilament as a cerebrospinal fluid (CSF) biomarker, there is reinvigorated interest in identifying other markers of or contributors to disease. The objective of this study is to probe the predictive potential of a panel of brain-enriched proteins on MS disease progression and subtype.MethodsThis study includes 40 individuals with MS and 14 headache controls. The MS cohort consists of 20 relapsing remitting (RR) and 20 primary progressive (PP) patients. The CSF of all individuals was analyzed for 63 brain enriched proteins using a method of liquid-chromatography tandem mass spectrometry. Wilcoxon rank sum test, Kruskal-Wallis one-way ANOVA, logistic regression, and Pearson correlation were used to refine the list of candidates by comparing relative protein concentrations as well as relation to known imaging and molecular biomarkers.ResultsWe report 30 proteins with some relevance to disease, clinical subtype, or severity. Strikingly, we observed widespread protein depletion in the disease CSF as compared to control. We identified numerous markers of relapsing disease, including KLK6 (kallikrein 6, OR = 0.367, p < 0.05), which may be driven by active disease as defined by MRI enhancing lesions. Other oligodendrocyte-enriched proteins also appeared at reduced levels in relapsing disease, namely CNDP1 (carnosine dipeptidase 1), LINGO1 (leucine rich repeat and Immunoglobin-like domain-containing protein 1), MAG (myelin associated glycoprotein), and MOG (myelin oligodendrocyte glycoprotein). Finally, we identified three proteins—CNDP1, APLP1 (amyloid beta precursor like protein 1), and OLFM1 (olfactomedin 1)—that were statistically different in relapsing vs. progressive disease raising the potential for use as an early biomarker to discriminate clinical subtype.ConclusionsWe illustrate the utility of targeted mass spectrometry in generating potential targets for future biomarker studies and highlight reductions in brain-enriched proteins as markers of the relapsing remitting disease stage.

P19 Defining the mechanism of skin barrier restoration by Lactobacillus rhamnosus

Abstract Introduction and aims We aim to investigate the lysate of Lactobacillus rhamnosus GG (LGG), a bacterium previously established as a gut probiotic, and to examine its postulated ability to enhance and restore human skin barrier function. Compromised skin barriers are implicated in various skin conditions including atopic dermatitis. Furthermore, skin barrier function decreases with age leading to dryness and sensitivity. Previous research has shown promising effects of LGG lysates on keratinocytes, including increasing transepidermal electrical resistance, increasing tight junction protein expression, cell migration promotion and mitigation of Staphylococcus aureus toxicity. This study aims to take a closer look at the molecular mechanisms behind the effect of LGG lysates on the skin, including terminal differentiation, lamin dispersal and nuclear degradation in keratinocytes. Methods Normal human epithelial keratinocytes and rat epithelial keratinocytes were grown and treated with the LGG lysate. Western blot analysis was used to determine the relative concentrations of tight junction proteins and other differentiation markers. A phosphoproteomic study was performed to identify key pathways activated by the LGG lysate. A Staphylococcus epidermidis lysate control was used to filter out any nonspecific bacterial effects. Immunostaining of nuclear proteins was used to visualize the effects of LGG lysate on lamin dispersal and nuclear degradation. short hairpin RNA filaggrin knockdown normal human keratinocytes were developed to create a ‘barrier impaired’ model to assess ability of the lysate to ‘rescue’ the skin barrier. Results The LGG lysate was shown to increase tight junction protein expression in normal human keratinocytes and increase keratinocyte terminal differentiation markers. We present Results that show decreased tight junction protein expression in filaggrin knockdown cells. Conclusions These Results show the potential for LGG lysate to enhance and restore skin barrier function and begin to suggest potential mechanisms for this effect.

Comparison of Morphological, Physiological, and Related Gene Expression Responses to Drought Stress in Five Camellia vietnamensis Cultivars

The main production area of Camellia vietnamensis (C. vietnamensis) is in the low mountain and hilly areas of southern China. The low survival rate of seedlings caused by drought is one of the main obstacles restricting the development of the C. vietnamensis industry. An exploration of the key adaptation mechanism of C. vietnamensis to drought stress is important in order to improve its drought resistance. We conducted a study on the morphological, physiological, biochemical, and drought resistance-related genes of five C. vietnamensis cultivars grown in Hainan province under varying degrees of drought stress. The results indicate that drought stress can lead to a decrease in the relative water content and photosynthetic capacity of C. vietnamensis leaves. Compared with the control, the drought damage index, malondialdehyde, relative electrical conductivity, soluble protein, soluble sugar and proline contents of the five C. vietnamensis cultivars increased with drought-stress duration and degree. With increasing drought-stress intensity, the activity of antioxidant enzymes and the content of related metabolites (total polyphenols, total flavonoids, tea saponins) gradually increased, and the expression levels of phenylpropanoid pathway-related genes (Cv4CL1, CvCAD1, CvCAD2, CvPOX1, CvPOX2, CvPOX3) were upregulated. Based on the results of the drought tolerance coefficients, principal component analysis, and hierarchical cluster analysis, we classified five C. vietnamensis cultivars into drought-tolerant cultivars (‘Haida 1’); moderately drought-tolerant cultivars (‘Haida 4’ and ‘Wanhai 4’); and drought-sensitive cultivars (‘Wanhai 3’ and ‘Wanhai 1’). The results of this study provide a theoretical basis for the promotion and cultivation of C. vietnamensis and the selection of drought-resistant cultivars.

Treatment of seeds by cold ambient air plasma: combining impedance measurements with water sorption modeling to understand the impact of seed hydration

In this article, we focus on the plasma seed interaction and more specifically-on the feedback exerted by the seeds on the plasma properties. Dormant Arabidopsis seeds with different water contents (WC), namely 3%DW, 10%DW and 30%DW were exposed to cold ambient air plasma (C2AP) generated in a dielectric barrier device (DBD). It is found that increasing WC enhances the capacitive current of the DBD, generates a greater number of low energy streamers (characterized by current peaks lower than 10 mA) that preferentially interplay with the seeds. Since the resistive and capacitive components of the seeds modify the C2AP electrical properties, impedance measurements (also called LCRmetry) have been carried out to measure their main dielectric parameters before/after plasma exposure (seeds resistance, capacitance, complex relative permittivity, tangent loss and conductivity). It appears that WC significantly changes dielectric losses at low frequencies (<1 kHz) due to polarization relaxation of the polar molecules (i.e. water). LCRmetry further reveals that C2AP does not substantially alter seeds dielectric parameters, i.e. it neither adds or removes significant amounts of new materials, meaning that the relative starch, protein and lipid contents remain essentially unaffected. However, it cannot be discounted that some bulk properties of the Arabidopsis seeds may be modified, especially regarding their porosity. This characteristic could facilitate penetration of plasma-generated reactive oxygen species into the internal seed tissues, leading to the grafting of oxygenated groups. To corroborate this theory, water sorption isotherms have been achieved on Arabidopsis seeds and fitted with four thermodynamic models, including the Brunauer–Emmett–Teller model and the Generalized D’Arcy and Watt model. It is demonstrated that C2AP primarily strengthens water-seed affinity by modifying molecular interactions rather than changing the seed’s moisture layer. This occurs despite a potential decrease in the number of adsorption sites, indicating a significant increase in overall seed hydrophilicity after plasma treatment.

Synergistic detoxification efficiency and mechanism of triclocarban degradation by a bacterial consortium in the liver-gut-microbiota axis of zebrafish (Danio rerio)

Triclocarban (TCC), an emerging organic contaminant, poses a potential threat to human health with long-term exposure. Here, Rhodococcus rhodochrous BX2 and Pseudomonas sp. LY-1 were utilized to degrade TCC at environmental related concentrations for enhancing TCC biodegradation and investigating whether the toxicity of intermediate metabolites is lower than that of the parent compound. The results demonstrated that the bacterial consortium could degrade TCC by 82.0% within 7 days. The calculated 96 h LC50 for TCC, as well as its main degradation product 3,4-Dichloroaniline (DCA) were 0.134 mg/L and 1.318 mg/L respectively. Biodegradation also alleviated histopathological lesions induced by TCC in zebrafish liver and gut tissues. Liver transcriptome analysis revealed that biodegradation weakened differential expression of genes involved in disrupted immune regulation and lipid metabolism caused by TCC, verified through RT-qPCR analysis and measurement of related enzyme activities and protein contents. 16 S rRNA sequencing indicated that exposure to TCC led to gut microbial dysbiosis, which was efficiently improved through TCC biodegradation, resulting in decreased relative abundances of major pathogens. Overall, this study evaluated potential environmental risks associated with biodegradation of TCC and explored possible biodetoxification mechanisms, providing a theoretical foundation for efficient and harmless bioremediation of environmental pollutants.

Physio-Biochemical Insights into the Cold Resistance Variations among Nectarine (Prunus persica (L.) Batsch var. nectarina) Cultivars.

Cold stress occurs in late winter and early spring threatens greatly the nectarine industry. In this study, the semi-lethal low temperature (LT50) and thirteen cold resistance related parameters of five nectarine cultivars, including 'Nonglehong little princess' (LP), 'Luyou No. 5' (LY), 'Nonglehong No. 6' (NL), 'Zhongyou No. 20' (ZY) and 'Qiuhongzhu' (QH), were determined. Based on these parameters, they were categorized into high-(HR, including NL and LP), moderate-(MR, including QH) and low-cold resistant (LR, including ZY and LY) groups. The relative water (RW), proline (PRO), soluble sucrose (SS) and soluble protein (SP) contents, and superoxide dismutase (SOD) and peroxidase (POD) activities of HR cultivars were higher while their relative electronic conductivity (RE), malondialdehyde (MDA) and gibberellin acid (GA3) contents and catalase (CAT) activity were lower than other cultivars during natural overwintering. Redundancy analysis revealed that the lowest temperature in a day (LT) and LT50 significantly explains 69.8% and 10.9% of these physiological variables, respectively. Moreover, GA3 and indoleacetic acid (IAA) contents and CAT activity were positively correlated, while PRO, SS, ABA and RW contents were negatively correlated with both LT and LT50. Our study will be helpful in understanding the cold resistance variations of nectarine germplasm resources.

Development and Characterization of a Natural Antioxidant Additive in Powder Based on Polyphenols Extracted from Agro-Industrial Wastes (Walnut Green Husk): Effect of Chickpea Protein Concentration as an Encapsulating Agent during Storage.

Developing a powder-form natural antioxidant additive involves utilizing polyphenols extracted from agro-industrial wastes (walnut green husk). This research explores chickpea proteins (CPP) as an emergent encapsulating agent to enhance the stability and shelf life of the antioxidant additive. This study aims to develop a natural antioxidant powder additive based on polyphenols obtained from walnut green husks encapsulated by chickpea protein (5%, 7.5%, and 10% w/v) to evaluate their effect under storage at relative humidities (33 and 75% RH). The physicochemical and structural properties analysis indicated that better results were obtained by increasing the protein concentration. This demonstrates the protective effect of CPP on the phenolic compounds and that it is potentially non-toxic. The results suggest that the optimal conditions for storing the antioxidant powder, focusing on antioxidant activity and powder color, involve low relative humidities (33%) and high protein concentration (10%). This research will contribute to demonstrating chickpea protein as an emerging encapsulating agent and the importance of the cytotoxic analysis of extracts obtained from agroindustrial wastes.

Evaluation of two advanced generation boro rice mutants based on morpho-physiological criteria

Experiments were performed at farmers’ fields of five locations viz., Mymensingh, Sherpur, Jamalpur, Natore and Naogaon districts with two promising Boro rice mutants, RM-16(N)-8, RM-16(N)-10 and a check, BRRI dhan58 to evaluate some morpho-physiological features and its impact on grain yield. The experiment was setup in RCB design with three replications. Results revealed that high yielding genotypes, in general, showed superiority in morpho-physiological characters (leaf area, leaf area index, total dry mass production, absolute growth rate, relative growth rate, chlorophyll, total sugar and soluble protein content in leaves and harvest index) than the low yielding one. Results further indicated that genotype improvement efforts have achieved higher grain yield by higher growth rate at early growth stages and better assimilate partitioning to economic yield and short stature plants are unlikely to improve harvest index and resistant to lodging in rice. The mutant, RM-16(N)-10 had medium plant stature with greater biomass production capacity, superiority in growth and biochemical parameters and improve dry matter partitioning to economic yield which resulted higher number of grains panicle-1, thereby grain yield. In contrast, RM-16(N)-8 showed inferiority in morpho-physiological characters and performed the lowest yield attributes and grain yield. This information may be used in future plant breeding programme. Bangladesh J. Nuclear Agric, 37(2): 69-80, 2023

Do exogenous melatonin and nitric oxide mitigate the adverse effects of flooding stress in spinach?

Studies are being conducted to develop strategies to reduce the adverse effects of flooding stress in plants, including melatonin and nitric oxide (NO) applications. In the present study, we tried six different application subjects: full irrigation - control (FI), flooding stress (FS), FS + application of 50 µM melatonin, FS + application of 100 µM melatonin, FS + application of 50 µM nitric oxide (NO), and FS + application of 100 µM NO. The flooding subjects were subjected to stress 10 days before harvest, which was continued until harvest. Melatonin and nitric oxide were applied to plant leaves twice, with a 1-week interval, by spraying to cover the whole plant. We found that flooding stress reduced in certain agronomic parameters and exerted a negative effect on leaf relative water content (RWC), chlorophyll a, b, carotenoid, and protein content, actual photosynthetic efficiency (PSII), stomatal conductance (gs), and chlorophyll fluorescence (Fv/Fm). In addition to increasing the reactive oxygen species (ROS) production under stress conditions, Flooding stress significantly increased the content of proline, leaf temperature, and antioxidant enzyme activity. The melatonin and nitric oxide doses contributed to plant development as well as regulated the pigment content, thereby promoting the ROS-scavenging antioxidant defense system. The principal component analysis (PCA) performed to evaluate the data collectively revealed that full irrigation yielded the best results for agronomic and physiological parameters. The PCA results demonstrated that FS + application of 100 µM melatonin, located in the region closest to full irrigation conditions, was the most effective application under flooding stress conditions. Melatonin applications are crucial for sustainable agriculture, thereby reducing the yield and quality losses compared to nitric oxide applications in regions where spinach is cultivated, and there is a risk of floods.

Halotolerant and plant growth-promoting endophytic fungus Aspergillus terreus CR7 alleviates salt stress and exhibits genoprotective effect in Vigna radiata.

Soil salinity is one of the major environmental stresses that results in reduction of cultivable land and decreased productivity. In the present study, halotolerant and plant growth-promoting endophytic fungi were isolated from Catharanthus roseus, and their effect in mitigating salt stress in Vigna radiata was evaluated. An isolate CR7, identified to be Aspergillus terreus, showing plant growth promotion activities, viz. IAA production (23.43 ± 0.79 μg/ml), phosphate solubilization (133.63 ± 6.40 μg/ml), ACC deaminase activity (86.36 ± 2.70 μmol α-ketobutyrate/h/mg protein) etc. and ability to grow at 15% NaCl was selected for further in vivo studies. Colonization of CR7 was carried out in V. radiata which was subjected to different concentrations of salt (150, 200, and 250 mM NaCl). Under salt stress, A. terreus CR7 inoculated plants showed substantially improved root and shoot length, biomass, chlorophyll content, relative water content, phenolics, protein content, and DPPH scavenging activity. Endogenous IAA level was enhanced by 5.28-fold in treated plants at maximum salt stress. Inoculation of A. terreus CR7 affected oxidative stress parameters, exhibiting an increase in catalase and superoxide dismutase and reduction in proline, electrolyte leakage, and malondialdehyde content. Fluorescent microscopic analysis of roots revealed improved cell viability and decreased levels of glutathione and hydrogen peroxide under salt stress in treated plants. The isolate A. terreus CR7 also protected against DNA damage induced by salt stress which was evaluated using comet assay. A decrease in DNA tail length, tail moment, and olive tail moment to the extent of 19.87%, 19.76%, and 24.81%, respectively, was observed in A. terreus CR7-colonized plants under salt stress. It can be concluded that A. terreus CR7 can be exploited for alleviating the impact of salt stress in crop plants.

Internal fibrinolysis of fibrin clots is driven by pore expansion

Blood clots, which are composed of blood cells and a stabilizing mesh of fibrin fibers, are critical in cessation of bleeding following injury. However, their action is transient and after performing their physiological function they must be resolved through a process known as fibrinolysis. Internal fibrinolysis is the degradation of fibrin by the endogenous or innate presence of lytic enzymes in the bloodstream; under healthy conditions, this process regulates hemostasis and prevents bleeding or clotting. Fibrin-bound tissue plasminogen activator (tPA) converts nearby plasminogen into active plasmin, which is bound to the fibrin network, breaking it down into fibrin degradation products and releasing the entrapped blood cells. It is poorly understood how changes in the fibrin structure and lytic protein ratios influence the biochemical regulation and behavior of internal fibrinolysis. We used turbidity kinetic tracking and microscopy paired with mathematical modeling to study fibrin structure and lytic protein ratios that restrict internal fibrinolysis. Analysis of simulations and experiments indicate that fibrinolysis is driven by pore expansion of the fibrin network. We show that this effect is strongly influenced by the ratio of fibrin:tPAwhen compared to absolute tPA concentration. Thus, it is essential to consider relative protein concentrations when studying internal fibrinolysis both experimentally and in the clinic. An improved understanding of effective internal lysis can aid in development of better therapeutics for the treatment of bleeding and thrombosis.

Potassium humate and cobalt enhance peanut tolerance to water stress through regulation of proline, antioxidants, and maintenance of nutrient homeostasis

Water stress is an important factor that substantially impacts crop production. As a result, there is a need for various strategies that can mitigate these negative effects. One such strategy is the application of potassium humate (Kh) and cobalt (Co), which have been reported to enhance the resistance of crop plants. Therefore, the present experiment was designed to investigate whether the application of Kh and Co could positively affect proline, chlorophyll and mineral elements contents, and antioxidant defense systems which in turn will mitigate the negative impact of water stress under different irrigation strategies. In 2021 and 2022, an open-field experiments were conducted by using a split-plot design. The main plots were divided to represent different irrigation strategies (ST), with additional control of full irrigation requirements (ST1). Four STs were implemented, with ST1, followed by the application of 75%, 50%, and 25% irrigation strategies in ST2, ST3, and ST4 respectively, in the next irrigation, followed by the full requirements, and so on. In the subplots, peanut plants were treated with tap water (Control), Kh at 2 g l−1 and 3 g l−1, Co, Co + Kh 2 g l−1 and Co + Kh 3 g l−1. The yield was negatively affected by the implementation of ST4, despite the increase in proline contents. Furthermore, there was a decrease in relative water content, chlorophyll content, antioxidant enzymes, protein, and mineral nutrient elements. However, the application of Kh or Co showed better improvements in most of the studied parameters. It is worth noting that there was an antagonistic relationship between Co and iron/manganese, and the intensity of this relationship was found to depend on the STs implemented. The highest mineral nutrient accumulation, chlorophyll content, relative water content, protein content, oil content, seed yield, and water productivity were observed when peanut plants were treated with Kh 3 g l−1 + Co under the ST2 water strategy.

Analysis, classification and identification of gastropod locomotive mucus by Fourier transform infrared spectroscopy

ABSTRACT Mucus is a defining feature of many gastropod phenotypes. Its material properties are a product of selection acting on the relationship between mucus composition, structure and performance; however, to date, there are very few studies addressing this. Here, we introduce attenuated total reflection Fourier transform infrared (FTIR) spectroscopy as an accessible analytical technique to record, identify and classify gastropod locomotive mucus, as deposited, with practically no intervention. Advancing the field beyond previous spectroscopic studies, we also probe mucus response to a temperature increase, determining its propensity to remain hydrated (i.e. resist denaturation) and serving as the basis for building cladograms based on spectral similarities. Specifically, the relative content of proteins, their secondary structures, protein-carbohydrate interactions, and thermal stability were investigated and shown to have significant variation between species. Collating and comparing over 648 spectra across 12 species and 7 superfamilies, we report that it is even possible to classify gastropods based solely on their secreted pedal mucus. This was further compared to previously published phylogenetic data and taxonomies enabling a 100% hit rate of genus assignment, implying that mucus FTIR may also be a powerful tool for field-based biodiversity studies.

Pollen nutrition structures bee and plant community interactions.

As bees' main source of protein and lipids, pollen is critical for their development, reproduction, and health. Plant species vary considerably in the macronutrient content of their pollen, and research in bee model systems has established that this variation both modulates performance and guides floral choice. Yet, how variation in pollen chemistry shapes interactions between plants and bees in natural communities is an open question, essential for both understanding the nutritional dynamics of plant-pollinator mutualisms and informing their conservation. To fill this gap, we asked how pollen nutrition (relative protein and lipid content) sampled from 109 co-flowering plant species structured visitation patterns observed among 75 subgenera of pollen-collecting bees in the Great Basin/Eastern Sierra region (USA). We found that the degree of similarity in co-flowering plant species' pollen nutrition predicted similarity among their visitor communities, even after accounting for floral morphology and phylogeny. Consideration of pollen nutrition also shed light on the structure of this interaction network: Bee subgenera and plant genera were arranged into distinct, interconnected groups, delineated by differences in pollen macronutrient values, revealing potential nutritional niches. Importantly, variation in pollen nutrition alone (high in protein, high in lipid, or balanced) did not predict the diversity of bee visitors, indicating that plant species offering complementary pollen nutrition may be equally valuable in supporting bee diversity. Nutritional diversity should thus be a key consideration when selecting plants for habitat restoration, and a nutritionally explicit perspective is needed when considering reward systems involved in the community ecology of pollination.