Relative Abundance Of Native Species Research Articles

Effects of land use, habitat characteristics, and small mammal community composition on Leptospira prevalence in northeast Madagascar.

Human activities can increase or decrease risks of acquiring a zoonotic disease, notably by affecting the composition and abundance of hosts. This study investigated the links between land use and infectious disease risk in northeast Madagascar, where human subsistence activities and population growth are encroaching on native habitats and the associated biota. We collected new data on pathogenic Leptospira, which are bacteria maintained in small mammal reservoirs. Transmission can occur through close contact, but most frequently through indirect contact with water contaminated by the urine of infected hosts. The probability of infection and prevalence was compared across a gradient of natural moist evergreen forest, nearby forest fragments, flooded rice and other types of agricultural fields, and in homes in a rural village. Using these data, we tested specific hypotheses for how land use alters ecological communities and influences disease transmission. The relative abundance and proportion of exotic species was highest in the anthropogenic habitats, while the relative abundance of native species was highest in the forested habitats. Prevalence of Leptospira was significantly higher in introduced compared to endemic species. Lastly, the probability of infection with Leptospira was highest in introduced small mammal species, and lower in forest fragments compared to other habitat types. Our results highlight how human land use affects the small mammal community composition and in turn disease dynamics. Introduced species likely transmit Leptospira to native species where they co-occur, and may displace the Leptospira species naturally occurring in Madagascar. The frequent spatial overlap of people and introduced species likely also has consequences for public health.

The Thermal Regime and Species Composition of Fish and Invertebrates in Kelly Warm Spring, Grand Teton National Park, Wyoming

Abstract. We evaluated the thermal regime and relative abundance of native and nonnative fish and invertebrates within Kelly Warm Spring and Savage Ditch, Grand Teton National Park, Wyoming. Water temperatures within the system remained relatively warm year-round with mean temperatures >20 °C near the spring source and >5 °C approximately 2 km downstream of the source. A total of 7 nonnative species were collected: Convict/Zebra Cichlid (Cichlasoma nigrofasciatum), Green Swordtail (Xiphophorus hellerii), Tadpole Madtom (Noturus gyrinus), Guppy (Poecilia reticulata), Goldfish (Carassius auratus), red-rimmed melania snail (Melanoides tuberculata), and American bullfrog tadpoles (Lithobates catesbeianus). Nonnative fish (Zebra Cichlids and Green Swordtails), red-rimmed melania snails, and bullfrog tadpoles dominated the upper 2 km of the system. Abundance estimates of the Zebra Cichlid exceeded 12,000 fish/km immediately downstream of the spring source. Relative abundance of native species increased moving d...

Use of multivariate control charts to assess the status of reef fish assemblages in the Northwestern Hawaiian Islands.

A distance-based multivariate control chart is a useful tool for ecological monitoring to detect changes in biological community resulting from natural or anthropogenic disturbances at permanent monitoring sites. It is based on a matrix of any distances or dissimilarities among observations obtained from species composition and abundance data, and bootstrapping techniques are used to set upper confidence bounds that trigger an alarm for further investigations. We extended the use of multivariate control charts to stratified random sampling and analyzed reef fish monitoring data collected annually on shallow (≤30 m) reefs across the Northwestern Hawaiian Islands (NWHI), part of the Papahānaumokuākea Marine National Monument. Fish assemblages in the NWHI were mostly stable, with exceptions in the south region (Nihoa, Mokumanamana and French Frigate Shoals) in 2012 and 2015 where changes in the assemblage structure exceeded the upper confidence bounds of multivariate control charts. However, these were due to changes in relative abundances of native species, and potentially related to the small numbers of survey sites and relatively low coral covers at the sites, particularly in 2015. The present study showed that multivariate control charts can be used to evaluate the status of biological communities in a very large protected area. Future monitoring of fish assemblages in the Papahānaumokuākea Marine National Monument should be accompanied by specific habitat or environmental variables that are related to potential threats to its shallow-water ecosystems. This should allow for more detailed investigations into potential causes and mechanisms of changes in fish assemblages when a multivariate control chart triggers an alarm.

Desertification, salinization, and biotic homogenization in a dryland river ecosystem

This study determined long-term changes in fish assemblages, river discharge, salinity, and local precipitation, and examined hydrological drivers of biotic homogenization in a dryland river ecosystem, the Trans-Pecos region of the Rio Grande/Rio Bravo del Norte (USA/Mexico). Historical (1977–1989) and current (2010–2011) fish assemblages were analyzed by rarefaction analysis (species richness), nonmetric multidimensional scaling (composition/variability), multiresponse permutation procedures (composition), and paired t-test (variability). Trends in hydrological conditions (1970s–2010s) were examined by Kendall tau and quantile regression, and associations between streamflow and specific conductance (salinity) by generalized linear models. Since the 1970s, species richness and variability of fish assemblages decreased in the Rio Grande below the confluence with the Rio Conchos (Mexico), a major tributary, but not above it. There was increased representation of lower-flow/higher-salinity tolerant species, thus making fish communities below the confluence taxonomically and functionally more homogeneous to those above it. Unlike findings elsewhere, this biotic homogenization was due primarily to changes in the relative abundances of native species. While Rio Conchos discharge was>2-fold higher than Rio Grande discharge above their confluence, Rio Conchos discharge decreased during the study period causing Rio Grande discharge below the confluence to also decrease. Rio Conchos salinity is lower than Rio Grande salinity above their confluence and, as Rio Conchos discharge decreased, it caused Rio Grande salinity below the confluence to increase (reduced dilution). Trends in discharge did not correspond to trends in precipitation except at extreme-high (90th quantile) levels. In conclusion, decreasing discharge from the Rio Conchos has led to decreasing flow and increasing salinity in the Rio Grande below the confluence. This spatially uneven desertification and salinization of the Rio Grande has in turn led to a region-wide homogenization of hydrological conditions and of taxonomic and functional attributes of fish assemblages.

Removal of an invasive shrub (Chinese privet: Ligustrum sinense Lour) reduces exotic earthworm abundance and promotes recovery of native North American earthworms

This study investigated the possibility of a facilitative relationship between Chinese privet (Ligustrum sinense) and exotic earthworms, in the southeastern region of the USA. Earthworms and selected soil properties were sampled five years after experimental removal of privet from flood plain forests of the Georgia Piedmont region. The earthworm communities and soil properties were compared between sites with privet, privet removal sites, and reference sites where privet had never established. Results showed that introduced European earthworms (Aporrectodea caliginosa, Lumbricus rubellus, and Octolasion tyrtaeum) were more prevalent under privet cover, and privet removal reduced their relative abundance (from >90% to ∼70%) in the community. Conversely, the relative abundance of native species (Diplocardia michaelsenii) increased fourfold with privet removal and was highest in reference sites. Soils under privet were characterized by significantly higher pH relative to reference plots and privet removal facilitated a significant reduction in pH. These results suggest that privet-mediated effects on soil pH may confer a competitive advantage to European lumbricid earthworms. Furthermore, removal of the invasive shrub appears to reverse the changes in soil pH, and may allow for recovery of native earthworm fauna.

Effects of natural hydrological variability on fish assemblages in small Mediterranean streams: Implications for ecological assessment

Small Mediterranean streams are shaped by predictable seasonal events of flooding and drying over an annual cycle, and present a strong inter and intra-annual variation in flow regime. Native fish assemblages in these streams are adapted to this natural environmental variability. The distinction of human-induced disturbances from the natural ones is thus a crucial step before assessing the ecological status of these streams. In this aim, the present study evaluates the effects of natural hydrological variability on fish assemblages from disturbed and least disturbed sites in small intermittent streams of south Portugal. Data were collected over the last two decades (1996–2011) in 14 sites located in the Guadiana and Sado river basins. High variability of fish assemblages was strongly dependent on human-induced disturbances, particularly nutrient/organic load and sediment load, and on natural hydrological variability. Natural hydrological variability can act jointly with anthropogenic disturbances, producing changes on fish assemblages structure of small intermittent streams. In least disturbed sites, despite the natural disturbances caused by inter-annual rainfall variations (including drought and flood events), fish assemblages maintained a long-term stability and revealed a high resilience. On the contrary, disturbed sites presented significantly higher variability on fish assemblages and a short and long-term instability, reflecting a decrease on the resistance and resilience of fish assemblages. Under these conditions, fish fauna integrity is particularly vulnerable and the ecological assessment may be influenced by natural hydrological variations. High hydrological variability (especially if it entails high frequency of dryer years and meaningful cumulative water deficit) may affect the impact of the human pressures with significant and consistent consequences on fish assemblage composition and integrity. In this study, fish metrics that maximize the detection of human degradation and minimize the response to natural variability were based on the relative abundance of native species (insectivorous species, eurytopic species, water column species, native lithophilic species), relative abundance of species with intermediate tolerance and relative number of exotic species. Results highlight the importance of assessing temporal variability on stream biomonitoring programs and emphasize the need to improve the assessment tools, accounting for long-term changes in fish assemblages, namely by selecting the most appropriate fish metrics that respond to anthropogenic disturbances but exhibit low natural temporal variability, essential both in the characterization of the biological reference conditions and in the development of fish indexes in intermittent streams.

Evaluating the effect of American mink, an alien invasive species, on the abundance of a native community: is coexistence possible?

Loss of biodiversity due to biological invasions is one of the most critical issues our society is facing. American mink is one of the most nefarious invasive non-native species and has major consequences for diversity, ecosystems and economics. A project to evaluate the impact of American mink has been carried out in Catalonia since 2000 under the aegis of regional and national government and a European LIFE programme. In this study, we tested whether temporal variations in the relative abundance of native species were related to American mink. In addition, we compared the abundance of natives before and after mink arrival. Among the competitors spotted genet and European polecat, mink abundance and arrival had a significant negative effect on their populations. However, among black rat and fish prey only three native fish species had a negative temporal relation with the abundance of mink and three fish species showed a significant difference in their abundance before and after mink arrival. The effect of mink was significant among species with a higher niche overlap (polecat and genet versus mink). The persistence and coexistence of the alien and native species seems to depend on heterogeneity, in terms of the based on niche segregation among these species.

Biotic interactions betweenEriopis connexaandHippodamia variegata, a native and an exotic coccinellid species associated with alfalfa fields in Chile

AbstractHuman‐assisted introductions, including those in the context of biological control, are considered to be one of the most important factors of global environmental change. However, the mechanisms underlying environmental changes, such as a decrease in the relative abundance of native species, are poorly understood. Since the introduction of the ladybird beetle,Hippodamia variegata(Goeze) (Coleoptera: Coccinellidae), in Chile in the 1970s for biological control of aphids, a reduction in the relative abundance of the native ladybird beetleEriopis connexa(Germar) has been noticed. To explore the role of cannibalism, intraguild predation (IGP) or competition as possible mechanisms that might increase dominance ofH. variegataoverE. connexa, several laboratory experiments were carried out. The native and the exotic species were very similar in their voracity and biotic interactions. AlthoughH. variegatawas able to maintain constant reproductive performance,E. connexareproduction decreased at lower densities of aphids,Acyrthosiphon pisum(Harris) (Hemiptera: Aphididae). The impacts of cannibalism, IGP, and competition exerted by these species were very symmetrical in both larvae and adults. We conclude that these biotic factors may not fully explain the increase in relative abundance ofH. variegata.The higher sensitivity ofE. connexato prey patch size, along with other factors such as chemical‐mediated negative interspecific interactions may be operating in alfalfa fields, changing the composition of associated coccinellid assemblages.

Aquaculture, non‐native salmonid invasions and associated declines of native fishes in Northern Patagonian lakes

Summary1. Even though intensive aquaculture production of salmonids in lakes occurs in many locations around the world published studies on the survival and reproductive success of escaped cultured salmonids in freshwater ecosystems are not common. A recent expansion of aquaculture in Chile has led it to become the world’s second largest producer of cultured salmonids.2. We document the recent history of escaped and self‐sustaining salmonid populations over a wide spatial scale and a long temporal scale in Chilean Patagonian lakes. Our hypotheses are that salmonid density in lakes will be higher where there is intensive aquaculture, due to greater numbers of potential escapees. Secondly, if non‐native salmonids have adverse impacts on native fishes, increases in the abundance of non‐native species should be associated with decreases in relative abundance of native species. Finally, if the first two hypotheses are correct we anticipate that diets of salmonids may show evidence of predation on native fishes, diet overlap with native species, and evidence of the influence of feed from aquaculture operations in the diets of salmonids and native fishes.3. We sampled six lakes with gill nets from 1992 to 2001. Our results show that the relative abundance of free‐living salmonids is closely related to the level of fish farming production. Salmonids are the top predators and in lakes with fish farming the main prey item is native fishes. The relative abundance of native fishes has decreased, most likely due to predation by salmonids.4. Our study contributes to the understanding of the effects of non‐native salmonids in oligotrophic lakes, and it provides a starting point to judge the establishment of new fish farming sites in lakes around the world.

The climatology of two succulent plant families: Cactaceae and Crassulaceae

The relative abundance of native species in both the Cactaceae and Crassulaceae in different regions of North America is highly negatively correlated with the coefficient of humidity, an estimate of soil moisture content. The species of both families are relatively more abundant in dry habitats as estimated by this coefficient and other moisture variables. The two families exhibit different patterns of seasonal correlation with the monthly values of the coefficient of humidity. The Cactaceae are most strongly correlated with winter values and the Crassulaceae with summer values. The preferred habitats of the Cactaceae are characterized by high rates of evaporation, while the preferred habitats of the Crassulaceae are characterized by low amounts of precipitation. The species of the Cactaceae are much more highly correlated (multiple R = 0.977) with the combination of moisture and temperature variables that best predict their relative geographic abundance than are those of the Crassulaceae (multiple R = 0.888) with the combination of variables yielding the best prediction of their abundance. It is suggested that the expression of the crassulacean acid metabolism (CAM) phenotype may be of less overall importance to the members of the Crassulaceae of North America than it is to the members of the Cactaceae.