Regional Ocean General Circulation Model Research Articles

Stirring the Deep, Disentangling the Complexity: Report on the Third Species of Thermochiton (Mollusca: Polyplacophora) From Haima Cold Seeps

This study documents a new deep-sea chiton from the Haima cold seeps.Thermochiton xui. nov. is the third species of the genusThermochitonand the first occurrence of this genus in the South China Sea. This species is identified by its morphological characteristics and the molecular sequence of aThermochitonspecies is reported for the first time. The placement of the new species is determined in the phylogenetic tree of Ischnochitonidae by Maximum Likelihood (ML) and Bayesian inference (BI) methods, based on the sequences of the mitochondrial cytochrome c oxidase subunit I (COI), 16S ribosomal DNA (16S), and nuclear 28S ribosomal DNA (28S) gene regions. Bayesian evolutionary analysis with an uncorrelated relaxed clock approach indicated that this new species is estimated to have diverged from its most closely related shallow-water ischnochitonid taxa 5.10–10.07 million years ago in the Late Miocene. A regional ocean general circulation model was used to estimate the potential dispersal ability of the three species of Thermochiton. Because it is highly unlikely for one species to have spread between the northwest and southwest Pacific to the localities in which this genus has been found to date, we propose that ‘stepping-stone’ habitats and/or ‘bridge species’ were involved in the dispersal and evolution of these cold-seep endemic chitons.The ZooBank Life Science Identifier (LSID) for this publication is: urn:lsid:zoobank.org:pub:AD93E4BC-2977-405E-B681-D956C5C66D83. And the ISID for Thermochiton xui sp. nov. is: urn:lsid:zoobank.org:act:0C75D2E3-F30E-4970-9BC2-3363B397720C.

Traces of the 1997 Indonesian Wildfires in the Marine Environment From a Network of Coral δ13C Records

AbstractGreat efforts have been made to understand the impacts of the 1997 Indonesian wildfires on land ecology and human health, yet its influences on marine environments are poorly understood owing to sparse observations. Here we present weekly to monthly resolution coral δ13C records across the South China Sea in conjunction with a regional ocean general circulation model to study the effects of these cataclysmic wildfires on nearby oceans. Large and persistent negative δ13C excursions were found in corals from the interior South China Sea several months after the wildfires. This delay indicates that the 13C‐depleted ash fallout was distributed by ocean currents rather than direct atmospheric transport, which is supported by the results of our numerical model. Thus, the impacts of tropical wildfires on marine ecology may last for 1 year and extend thousands of kilometers from the burning center.

Development of a Biogeochemical and Carbon Model Related to Ocean Acidification Indices with an Operational Ocean Model Product in the North Western Pacific

We developed a biogeochemical and carbon model (JCOPE_EC) coupled with an operational ocean model for the North Western Pacific. JCOPE_EC represents ocean acidification indices on the background of the risks due to ocean acidification and our model experiences. It is an off-line tracer model driven by a high-resolution regional ocean general circulation model (JCOPE2M). The results showed that the model adequately reproduced the general patterns in the observed data, including the seasonal variability of chlorophyll-a, dissolved inorganic nitrogen/phosphorus, dissolved inorganic carbon, and total alkalinity. We provide an overview of this system and the results of the model validation based on the available observed data. Sensitivity analysis using fixed values for temperature, salinity, dissolved inorganic carbon and total alkalinity helped us identify which variables contributed most to seasonal variations in the ocean acidification indices, pH and Ωarg. The seasonal variation in the pHinsitu was governed mainly by balances of the change in temperature and dissolved inorganic carbon. The seasonal increase in Ωarg from winter to summer was governed mainly by dissolved inorganic carbon levels.

A model study of the seasonality of sea surface temperature and circulation in the Atlantic North-eastern Tropical Upwelling System

The climatological seasonal cycle of the sea surface temperature (SST) in the north-eastern tropical Atlantic (7-25°N, 26-12°W) is studied using a mixed layer heat budget in a regional ocean general circulation model. The region, which experiences one of the larger SST cycle in the tropics, forms the main part of the Guinea Gyre. It is characterized by a seasonally varying open ocean and coastal upwelling system, driven by the movements of the intertropical convergence zone (ITCZ). The model annual mean heat budget has two regimes schematically. South of roughly 12°N, advection of equatorial waters, mostly warm, and warming by vertical mixing, is balanced by net air-sea flux. In the rest of the domain, a cooling by vertical mixing, reinforced by advection at the coast, is balanced by the air-sea fluxes. Regarding the seasonal cycle, within a narrow continental band, in zonal mean, the SST early decrease (from September, depending on latitude, until December) is driven by upwelling dynamics off Senegal and Mauritania (15°-20°N), and instead by air-sea fluxes north and south of these latitudes. Paradoxically, the later peaks of upwelling intensity (from March to July, with increasing latitude) essentially damp the warming phase, driven by air-sea fluxes. The open ocean cycle to the west, is entirely driven by the seasonal net air-sea fluxes. The oceanic processes significantly oppose it, but for winter north of ~18°N. Vertical mixing in summer-autumn tends to cool (warm) the surface north (south) of the ITCZ, and advective cooling or warming by the geostrophic Guinea Gyre currents and the Ekman drift. This analysis supports previous findings on the importance of air-sea fluxes offshore. It mainly offers quantitative elements on the modulation of the SST seasonal cycle by the ocean circulation, and particularly by the upwelling dynamics. Keywords: SST, upwelling, circulation, heat budget, observations, modeling

Sea level change under IPCC-A2 scenario in Bohai, Yellow, and East China Seas

Because of the environmental and socioeconomic impacts of anthropogenic sea level rise (SLR), it is very important to understand the processes leading to past and present SLRs towards more reliable future SLR projections. A regional ocean general circulation model (ROGCM), with a grid refinement in the Bohai, Yellow, and East China Seas (BYECSs), was set up to project SLR induced by the ocean dynamic change in the 21st century. The model does not consider the contributions from ice sheets and glacier melting. Data of all forcing terms required in the model came from the simulation of the Community Climate System Model version 3.0 (CCSM3) under the International Panel on Climate Change (IPCC)-A2 scenario. Simulation results show that at the end of the 21st century, the sea level in the BYECSs will rise about 0.12 to 0.20 m. The SLR in the BYECSs during the 21st century is mainly caused by the ocean mass redistribution due to the ocean dynamic change of the Pacific Ocean, which means that water in the Pacific Ocean tends to move to the continental shelves of the BYECSs, although the local steric sea level change is another factor.

A modeling study of the processes of surface salinity seasonal cycle in the Bay of Bengal

AbstractIn response to the Indian Monsoon freshwater forcing, the Bay of Bengal exhibits a very strong seasonal cycle in sea surface salinity (SSS), especially near the mouths of the Ganges‐Brahmaputra and along the east coast of India. In this paper, we use an eddy‐permitting (∼25 km resolution) regional ocean general circulation model simulation to quantify the processes responsible for this SSS seasonal cycle. Despite the absence of relaxation toward observations, the model reproduces the main features of the observed SSS seasonal cycle, with freshest water in the northeastern Bay, particularly during and after the monsoon. The model also displays an intense and shallow freshening signal in a narrow (∼100 km wide) strip that hugs the east coast of India, from September to January, in good agreement with high‐resolution measurements along two ships of opportunity lines. The mixed layer salt budget confirms that the strong freshening in the northern Bay during the monsoon results from the Ganges‐Brahmaputra river discharge and from precipitation over the ocean. From September onward, the East India Coastal Current transports this freshwater southward along the east coast of India, reaching the southern tip of India in November. The surface freshening results in an enhanced vertical salinity gradient that increases salinity of the surface layer by vertical processes. Our results reveal that the erosion of the freshwater tongue along the east coast of India is not driven by northward horizontal advection, but by vertical processes that eventually overcome the freshening by southward advection and restore SSS to its premonsoon values. The salinity‐stratified barrier layer hence only acts as a “barrier” for vertical heat fluxes, but is associated with intense vertical salt fluxes in the Bay of Bengal.

Upper ocean climate of the Eastern Mediterranean Sea during the Holocene Insolation Maximum – a model study

Abstract. Nine thousand years ago (9 ka BP), the Northern Hemisphere experienced enhanced seasonality caused by an orbital configuration close to the minimum of the precession index. To assess the impact of this "Holocene Insolation Maximum" (HIM) on the Mediterranean Sea, we use a regional ocean general circulation model forced by atmospheric input derived from global simulations. A stronger seasonal cycle is simulated by the model, which shows a relatively homogeneous winter cooling and a summer warming with well-defined spatial patterns, in particular, a subsurface warming in the Cretan and western Levantine areas. The comparison between the SST simulated for the HIM and a reconstruction from planktonic foraminifera transfer functions shows a poor agreement, especially for summer, when the vertical temperature gradient is strong. As a novel approach, we propose a reinterpretation of the reconstruction, to consider the conditions throughout the upper water column rather than at a single depth. We claim that such a depth-integrated approach is more adequate for surface temperature comparison purposes in a situation where the upper ocean structure in the past was different from the present-day. In this case, the depth-integrated interpretation of the proxy data strongly improves the agreement between modelled and reconstructed temperature signal with the subsurface summer warming being recorded by both model and proxies, with a small shift to the south in the model results. The mechanisms responsible for the peculiar subsurface pattern are found to be a combination of enhanced downwelling and wind mixing due to strengthened Etesian winds, and enhanced thermal forcing due to the stronger summer insolation in the Northern Hemisphere. Together, these processes induce a stronger heat transfer from the surface to the subsurface during late summer in the western Levantine; this leads to an enhanced heat piracy in this region, a process never identified before, but potentially characteristic of time slices with enhanced insolation.

Modeling Mediterranean Ocean climate of the Last Glacial Maximum

Abstract. A regional ocean general circulation model of the Mediterranean is used to study the climate of the Last Glacial Maximum. The atmospheric forcing for these simulations has been derived from simulations with an atmospheric general circulation model, which in turn was forced with surface conditions from a coarse resolution earth system model. The model is successful in reproducing the general patterns of reconstructed sea surface temperature anomalies with the strongest cooling in summer in the northwestern Mediterranean and weak cooling in the Levantine, although the model underestimates the extent of the summer cooling in the western Mediterranean. However, there is a strong vertical gradient associated with this pattern of summer cooling, which makes the comparison with reconstructions complicated. The exchange with the Atlantic is decreased to roughly one half of its present value, which can be explained by the shallower Strait of Gibraltar as a consequence of lower global sea level. This reduced exchange causes a strong increase of salinity in the Mediterranean in spite of reduced net evaporation.

Temporal variations and trends of CFC11 and CFC12 surface-water saturations in Antarctic marginal seas: Results of a regional ocean circulation model

The knowledge of chlorofluorocarbon (CFC11, CFC12) concentrations in ocean surface waters is a prerequisite for deriving formation rates of, and water mass ages in, deep and bottom waters on the basis of CFC data. In the Antarctic coastal region, surface-layer data are sparse in time and space, primarily due to the limited accessibility of the region. To help filling this gap, we carried out CFC simulations using a regional ocean general circulation model (OGCM) for the Southern Ocean, which includes the ocean–ice shelf interaction. The simulated surface layer saturations, i.e. the actual surface concentrations relative to solubility-equilibrium values, are verified against available observations. The CFC surface saturations driven by concentration gradients between atmosphere and ocean are controlled mainly by the sea ice cover, sea surface temperature, and salinity. However, no uniform explanation exists for the controlling mechanisms. Here, we present simulated long-term trends and seasonal variations of surface-layer saturation at Southern Ocean deep and bottom water formation sites and other key regions, and we discuss differences between these regions. The amplitudes of the seasonal saturation cycle vary from 22% to 66% and their long-term trends range from 0.1%/year to 0.9%/year. The seasonal surface saturation maximum lags the ice cover minimum by two months. By utilizing observed bottle data the full seasonal CFC saturation cycle can be determined offering the possibility to predict long-term trends in the future. We show that ignoring the trends and using instead the saturations actually observed can lead to systematic errors in deduced inventory-based formation rates by up to 10% and suggest an erroneous decline with time.

Steric height variability in the Nordic Seas

The variability of steric height in the Nordic Seas is analyzed on seasonal, interannual, and decadal timescales using a comprehensive data set of temperature and salinity observations for the second half of the twentieth century. Results from a regional Ocean General Circulation Model (OGCM) are used to assess the reliability of the averaging and the temporal interpolation of the inhomogeneous distributed observation data. The annual cycle explains only a minor part of the monthly variability for most of the region. The analysis on interannual to decadal timescales confined to the Norwegian Sea displays a clear rising trend starting at the end of the 1960s with particularly strong changes along the Barents Sea opening (6 to 7 cm). Moreover, a general freshening is found for the entire Norwegian Sea. In addition, a north‐south dipole of the thermal component of the steric height variability is identified. This dipole elevates the general rising trend along the Barents Sea opening and reduces it in the southern Norwegian Sea. The bulk of the interannual variability in steric height is governed by variations in the local meridional wind stress that determine the relative distribution of Atlantic and Arctic waters in the Norwegian Sea. In addition, reduced heat loss to the atmosphere strongly correlates with the North Atlantic Oscillation winter index. This, in turn, may in particular explain the large steric height increase found at the Barents Sea opening.

The effect of precession-induced changes in the Mediterranean freshwater budget on circulation at shallow and intermediate depth

The Neogene marine sedimentary record of the Mediterranean basin is characterised by the regular occurrence of organic-rich layers or sapropels. These sapropels are known to correlate with the precession cycle: their deposition coincides with precession minima. This correlation is thought to be caused to a large extent by a precession-induced increase in the amount of freshwater reaching the Mediterranean Sea. In the literature, various sources of this extra freshwater have been identified and different mechanisms as to how this freshwater flux leads to sapropels have been proposed. In this study we investigate the effects of precession-induced changes in the freshwater budget using a regional ocean general circulation model of the Mediterranean Sea. Emphasis is on the effects at the surface and at intermediate depth. The forcing of the ocean model is adjusted to precession minimum conditions on a parameter by parameter basis. Novel to our approach is that the value of the required adjustments is taken from a global coupled climate model with which experiments have been performed for the present day (close to precession maximum) and precession minimum. With the ocean model we focus on the extent to which extra runoff from either south (specifically: the river Nile) or north and changes in net precipitation over the sea itself lead to a more stable stratification; this we judge by the associated reduction of the sea surface salinity and mixed layer depth in the regions of intermediate and deep water formation. Our main finding is that the effects of (1) increased discharge of the rivers coming from the north, and (2) the increase in net precipitation over the sea itself, are of equal or greater importance than that of increase in Nile discharge.

Simulations of the distribution of sequestered CO 2 in the North Pacific using a regional general circulation model

A regional ocean general circulation model with different parameterizations of subgrid mesoscale mixing is used to study the evolution of sequestered CO 2 in the North Pacific after it has been validated for the annual uptake of chlorofluorocarbons (CFCs). The forcing of annual mean wind stress and perpetual wintertime (March) climatology is used to obtain the steady state flow fields, which are used to advect the sequestered CO 2. Most model runs are conducted under the assumption of no exchange of CO 2 between the atmosphere and the ocean. The simulated results show that the discharge depth is important for isolating sequestered CO 2 from venting to the atmosphere. It can be demonstrated that the depth of over 1000 m may be necessary for the storage of CO 2 in the ocean over a few hundred years. In terms of the coupled model of the atmosphere and the model ocean, after 50 years continuous injection, the escape rate from the ocean to the atmosphere is more than 10% of the injection rate. The different flow fields affect the distribution of sequestered CO 2, which is also discussed in terms of different parameterizations of mixing of tracers.