Reduced CO2 Assimilation Research Articles

C4 grasses employ distinct strategies to acclimate rubisco activase to heat stress.

Rising temperatures due to the current climate crisis will soon have devastating impacts on crop performance and resilience. In particular, CO2 assimilation is dramatically limited at high temperatures. CO2 assimilation is accomplished by rubisco, which is inhibited by the binding of inhibitory sugar phosphates to its active site. Plants therefore utilize the essential chaperone rubisco activase (RCA) to remove these inhibitors and enable continued CO2 fixation. However, RCA does not function at moderately high temperatures (42°C), resulting in impaired rubisco activity and reduced CO2 assimilation. We set out to understand temperature-dependent RCA regulation in four different C4 plants, with a focus on the crop plants maize (two cultivars) and sorghum, as well as the model grass Setaria viridis (setaria) using gas exchange measurements, which confirm that CO2 assimilation is limited by carboxylation in these organisms at high temperatures (42°C). All three species express distinct complements of RCA isoforms and each species alters the isoform and proteoform abundances in response to heat; however, the changes are species-specific. We also examine whether the heat-mediated inactivation of RCA is due to biochemical regulation rather than simple thermal denaturation. We reveal that biochemical regulation affects RCA function differently in different C4 species, and differences are apparent even between different cultivars of the same species. Our results suggest that each grass evolved different strategies to maintain RCA function during stress and we conclude that a successful engineering approach aimed at improving carbon capture in C4 grasses will need to accommodate these individual regulatory mechanisms.

Characterization of PetM cytochrome b6f subunit 7 domain-containing protein in tomato

Abstract In recent years, multiple advances have been made in understanding the photosynthetic machinery in model organisms. Knowledge transfer to horticultural important fruit crops is challenging and time-consuming due to restrictions in gene editing tools and prolonged life cycles. Here, we characterize a gene encoding a PetM domain-containing protein in tomato. The CRISPR/Cas9 knockout lines of the PetM showed impairment in the chloroplastic electron transport rate (ETR), reduced CO2 assimilation, and reduction of carotenoids and chlorophylls (Chl) under several light conditions. Further, growth-condition-dependent elevation or repression of Chl a/b ratios and de-epoxidation states were identified, underlining possible impairment compensation mechanisms. However, under low light and glasshouse conditions, there were basal levels in CO2 assimilation and ETR, indicating a potential role of the PetM domain in stabilizing the cytochrome b6f complex (Cb6f) under higher light irradiance and increasing its quantum efficiency. This suggests a potential evolutionary role in which this domain might stabilize the site of the Cb6f regulating ratios of cyclic and linear electron transport and its potential importance during the conquest of terrestrial ecosystems during which plants were exposed to higher irradiance. Finally, the results are discussed with regard to metabolism and their implication to photosynthesis from an agronomic perspective.

The silver lining of antibiotic resistance: Bacterial-mediated reduction of tetracycline plant stress via antibiotrophy

The reuse of water using effluents containing antibiotics from anthropogenic activities has been mainly linked to the development of antibiotic resistance. However, we report that the development of bacterial tolerance promotes plant growth. In the present study, we aimed to evaluate the efficiency of inoculation of a new antibiotic-degrading bacterium, Erwinia strain S9, in augmenting the tolerance of pea (Pisum sativum L.) plants to tetracycline (TET) (10 and 20 mg/L). Physiological parameters such as tissue elongation and biomass, as well as relative water content, were remarkably lower in plants exposed to TET than in the control. The inhibitory effects of TET were associated with reduced CO2 assimilation, stomatal conductance, transpiration, dark respiration, and light saturation point (LSP). High concentrations of TET-induced oxidative stress are attested by the overproduction of superoxide radicals (O2•−), hydrogen peroxide (H2O2), and hydroxyl radicals (HO•), resulting in increased malondialdehyde content and cell death. The high activity of antioxidant enzymes such as catalase, ascorbate peroxidase, and guaiacol peroxidase validated the proposed mechanism. Under TET stress conditions, supplementation with Erwinia strain S9 was beneficial to pea plants through osmotic adjustment, increased nutrient uptake, gas exchange optimization, and increased antioxidant activities. Its presence not only ensures plant survival and growth during antibiotic stress but also degrades TET via significant antibiotrophy. This strategy is a cost-effective environmental chemical engineering tool that can be used to depollute wastewater or to improve crop resistance in rhizofiltration treatment when treated wastewater is reused for irrigation.

Long-term rain exclusion in a Mediterranean forest: response of physiological and physico-chemical traits of Quercus pubescens across seasons.

With climate change, an aggravation in summer drought is expected in the Mediterranean region. To assess the impact of such a future scenario, we compared the response of Quercus pubescens, a drought-resistant deciduous oak species, to long-term amplified drought (AD) (partial rain exclusion in natura for 10 years) and natural drought (ND). We studied leaf physiological and physico-chemical trait responses to ND and AD over the seasonal cycle, with a focus on chemical traits including major groups of central (photosynthetic pigments and plastoquinones) and specialized (tocochromanols, phenolic compounds, and cuticular waxes) metabolites. Seasonality was the main driver of all leaf traits, including cuticular triterpenoids, which were highly concentrated in summer, suggesting their importance to cope with drought and thermal stress periods. Under AD, trees not only reduced CO2 assimilation (-42%) in summer and leaf concentrations of some phenolic compounds and photosynthetic pigments (carotenoids from the xanthophyll cycle) but also enhanced the levels of other photosynthetic pigments (chlorophylls, lutein, and neoxanthin) and plastochromanol-8, an antioxidant located in chloroplasts. Overall, the metabolomic adjustments across seasons and drought conditions reinforce the idea that Q. pubescens is highly resistant to drought although significant losses of antioxidant defenses and photoprotection were identified under AD.

Influence of Silicon on Tolerance to Water Deficit of Peach Trees

Water deficit in young fruit trees can reduce growth and future orchard productivity. Exogenous silicon (Si) applications have been associated with induced resistance to biotic and abiotic stresses such as water deficit, but the role of Si in fruit trees is still largely unexplored. The aim of the study was to evaluate the effect of Si applications on water status and gas exchange of young peach trees. This study comprises two experiments arranged in a factorial design with two water regimens (well-irrigated or water-stressed) and three Si concentrations (0, 10, or 20 mg⋅L−1 in the first experiment; 0, 20, or 40 mg⋅L−1 in the second experiment). Si applications via foliar spray were performed weekly after the water regimens were clearly established. Tree water status (midday stem water potential), and gas exchange parameters (CO2 assimilation, leaf transpiration, stomatal conductance, leaf water use efficiency) were measured. Si application at 10 or 20 mg⋅L−1 improved water status of water-stressed trees without affecting gas exchange, but 40 mg⋅L−1 reduced CO2 assimilation. Thus, foliar applications of Si could be a promising strategy for nonirrigated, nonbearing orchards to maintain their water status during dry periods and/or improve their recovery from water deficit.

Effect of low root-zone temperature on photosynthesis, root structure and mineral element absorption of tomato seedlings

Protected tomato cultivation is often subjected to low temperature stress in early spring season in north China. While low soil temperature returns slowly then low air temperature and causes damage to development of tomatoes, thereby reducing the growth of tomatoes, which seriously reduces the yield and quality of tomatoes. This study aimed to explore the effect of low root-zone temperature (LRT, i.e., 7 and 13℃) on the photosynthesis, root architecture, mineral use efficiency and aquaporins genes of tomato. Our findings indicated that LRT decreased the photosynthetic capacity accompanying with the reduction of CO2 assimilation. Meanwhile, a decrease in stomatal density and size occurred under low root-zone temperature. Stomatal conductance tended to reduce, which was unbeneficial to the diffusion of carbon dioxide and thus decreased photosynthesis. And there have the highest enzyme activity, and sucrose content compared to control. Root traits were remarkably affected by environment temperature. LRT delay root development processes and reduce the number and diameters of ducts in root and stem, thereby limiting mineral absorption and transport. Moreover, Under low root-zone temperature, the genes related to the aquaporin and element transport all showed varying degrees of response. Collectively, these results indicate that LRT may reduces the normal physiological activity of shoots by inhibiting the water transport, which inhibits the growth of tomato seedlings. Our research can provide detailed data to clarify the response characteristics of tomato to low root-zone temperature, and provide reference for low root-zone temperature response of tomato in practice.

The effect of supplementary light on the photosynthetic apparatus of strawberry plants under salinity and alkalinity stress

Considering the destructive effect of stresses on the photosynthetic apparatus of plants and the important role of light in photosynthesis, we investigated the effect of complementary light on the photosynthetic apparatus under salinity and alkalinity stress conditions. Light-emitting diodes (LEDs) in monochromatic blue (460 nm), monochromatic red (660 nm), dichromatic blue/red (1:3), white/yellow (400–700 nm) at 200 μmol m−2 S−1, and without LED treatment were used. The stress treatments were in three stages: Control (no stress), Alkalinity (40 mM NaHCO3), and Salinity (80 mM NaCl). Our results showed that salinity and alkaline stress reduced CO2 assimilation by 62.64% and 40.81%, respectively, compared to the control treatment. The blue light spectrum had the highest increase in water use efficiency (54%) compared to the treatment without supplementary light. Under salinity and alkalinity stress, L, K, and H bands increased and G bands decreased compared to the control treatment, with blue/red light causing the highest increase in L and K bands under both stress conditions. In salinity and alkalinity stress, white/yellow and blue/red spectra caused the highest increase in H bands. Complementary light spectra increased the G band compared to the treatment without complementary light. There was a significant decrease in power indices and quantum power parameters due to salt and alkalinity stress. The use of light spectra, especially blue, red, and blue/red light, increased these parameters compared with treatment without complementary light. Different light spectra have different effects on the photosynthetic apparatus of plants. It can be concluded that using red, blue spectra and their combination can increase the resistance of plants to stress conditions and be adopted as a strategy in planting plants under stress conditions.

Cultivar-Dependent Responses in Plant Growth, Leaf Physiology, Phosphorus Use Efficiency, and Tuber Quality of Potatoes Under Limited Phosphorus Availability Conditions.

The limited availability of phosphorus (P) in soils causes a major constraint in the productivity of potatoes, which requires increased knowledge of plant adaptation responses in this condition. In this study, six potato cultivars, namely, Agria, Lady Claire, Milva, Lilly, Sieglinde, and Verdi, were assessed for their responses on plant growth, leaf physiology, P use efficiency (PUE), and tuber quality with three P levels (Plow, Pmed, and Phigh). The results reveal a significant variation in the cultivars in response to different P availabilities. P-efficient cultivars, Agria, Milva, and Lilly, possessed substantial plant biomass, tuber yield, and high P uptake efficiency (PUpE) under low P supply conditions. The P-inefficient cultivars, Lady Claire, Sieglinde, and Verdi, could not produce tubers under P deprivation conditions, as well as the ability to efficiently uptake P under low-level conditions, but they were efficient in P uptake under high soil P conditions. Improved PUpE is important for plant tolerance with limited P availability, which results in the efficient use of the applied P. At the leaf level, increased accumulations of nitrate, sulfate, sucrose, and proline are necessary for a plant to acclimate to P deficiency-induced stress and to mobilize leaf inorganic phosphate to increase internal PUE and photosynthesis. The reduction in plant biomass and tuber yield under P-deficient conditions could be caused by reduced CO2 assimilation. Furthermore, P deficiency significantly reduced tuber yield, dry matter, and starch concentration in Agria, Milva, and Lilly. However, contents of tuber protein, sugars, and minerals, as well as antioxidant capacity, were enhanced under these conditions in these cultivars. These results highlight the important traits contributing to potato plant tolerance under P-deficient conditions and indicate an opportunity to improve the P efficiency and tuber quality of potatoes under deficient conditions using more efficient cultivars. Future research to evaluate molecular mechanisms related to P and sucrose translocation, and minimize tuber yield reduction under limited P availability conditions is necessary.

Physiological Characterization of Young 'Hass' Avocado Plant Leaves Following Exposure to High Temperatures and Low Light Intensity.

The worldwide demand for avocados has resulted in the planting of millions of young plants each year. However, global warming, resulting in high temperatures, sensed as heat stress, may severely damage these new plantings. The objective of this study was to assess the risks of heat stress on young avocado plants. We aimed to characterize different physiological parameters of young ‘Hass’ plant leaves following exposure to high temperatures under low light (LL) intensity and to pinpoint the temperature threshold for significant heat stress damage in these plants. To this end, young potted plants were subjected to different temperature gradients in a controlled-climate chamber. Minor and severe leaf damage was apparent in plants subjected to the 51 °C and 53 °C treatments, respectively. Minor and vast reductions in optimal quantum yield efficiency of photosystem II (Fv/Fm) values were observed in plants subjected to 51 °C and 53 °C, respectively. Heat stress treatments significantly reduced CO2 assimilation in plants subjected to 49 °C and higher temperatures. Stomatal conductance to water vapour and substomatal internal CO2 concentration were less sensitive to the heat treatments. These results imply that the heat damage threshold for young avocado plants under LL conditions is between 49 °C and 51 °C, whereas at 53 °C, severe and irreversible leaf damage occurs.

Physiological changes of pomegranate seedlings under salt stress and nitrogen fertilization

HIGHLIGHTS Irrigation water salinity alters gas exchange and biosynthesis of photosynthetic pigments in po-megranate. The reduction in CO2 assimilation in pomegranate plants under salt stress is related to non-stomatal factors. Increasing nitrogen doses increase electrolyte leakage in pomegranate seedlings.

Groundwater extraction reduces tree vitality, growth and xylem hydraulic capacity in Quercus robur during and after drought events

Climate change is expected to pose major direct and indirect threats to groundwater-dependent forest ecosystems. Forests that concurrently experience increased rates of water extraction may face unprecedented exposure to droughts. Here, we examined differences in stem growth and xylem hydraulic architecture of 216 oak trees from sites with contrasting groundwater availability, including sites where groundwater extraction has led to reduced water availability for trees over several decades. We expected reduced growth and xylem hydraulic capacity for trees at groundwater extraction sites both under normal and unfavourable growing conditions. Compared to sites without extraction, trees at sites with groundwater extraction showed reduced growth and hydraulic conductivity both during periods of moderate and extremely low soil water availability. Trees of low vigour, which were more frequent at sites with groundwater extraction, were not able to recover growth and hydraulic capacity following drought, pointing to prolonged drought effects. Long-term water deficit resulting in reduced CO2 assimilation and hydraulic capacity after drought are very likely responsible for observed reductions in tree vitality at extraction sites. Our results demonstrate that groundwater access maintains tree function and resilience to drought and is therefore important for tree health in the context of climate change.

Potassium Alleviates Post-anthesis Photosynthetic Reductions in Winter Wheat Caused by Waterlogging at the Stem Elongation Stage.

Waterlogging occurs frequently at the stem elongation stage of wheat in southern China, decreasing post-anthesis photosynthetic rates and constraining grain filling. This phenomenon, and the mitigating effect of nutrient application, should be investigated as it could lead to improved agronomic guidelines. We exposed pot-cultured wheat plants at the stem elongation stage to waterlogging treatment in combination with two rates of potassium (K) application. Waterlogging treatment resulted in grain yield losses, which we attributed to a reduction in the 1,000-grain weight caused by an early decline in the net photosynthetic rate (Pn) post-anthesis. These decreases were offset by increasing K application. Stomatal conductance (Gs) and the intercellular CO2 concentration (Ci) decreased in the period 7–21 days after anthesis (DAA), and these reductions were exacerbated by waterlogging. However, in the period 21–28 DAA, Gs and Ci increased, while Pn decreased continuously, suggesting that non-stomatal factors constrained photosynthesis. On DAA 21, Pn was reduced by waterlogging, but photochemical efficiency (ΦPSII) remained unchanged, indicating a reduction in the dissipation of energy captured by photosystem II (PSII) through the CO2 assimilation pathway. This reduction in energy dissipation increased the risk of photodamage, as shown by early reductions in ΦPSII in waterlogged plants on DAA 28. However, increased K application promoted root growth and nutrient status under waterlogging, thereby improving photosynthesis post-anthesis. In conclusion, the decrease in Pn caused by waterlogging was attributable to stomatal closure during early senescence; during later senescence, a reduction in CO2 assimilation accounted for the reduced Pn and elevated the risk of photodamage. However, K application mitigated waterlogging-accelerated photosynthetic reductions and reduced yield losses.

Physiological responses of date palm (Phoenix dactylifera) seedlings to seawater and flooding.

In their natural environment along coast lines, date palms are exposed to seawater inundation and, hence, combined stress by salinity and flooding. To elucidate the consequences of this combined stress on foliar gas exchange and metabolite abundances in leaves and roots, date palm seedlings were exposed to flooding with seawater and its major constituents under controlled conditions. Seawater flooding significantly reduced CO2 assimilation, transpiration and stomatal conductance, but did not affect isoprene emission. A similar effect was observed upon NaCl exposure. By contrast, flooding with distilled water or MgSO4 did not affect CO2 /H2 O gas exchange or stomatal conductance significantly, indicating that neither flooding itself, nor seawater sulfate, contributed greatly to stomatal closure. Seawater exposure increased Na and Cl contents in leaves and roots, but did not affect sulfate contents significantly. Metabolite analyses revealed reduced abundances of foliar compatible solutes, such as sugars and sugar alcohols, whereas nitrogen compounds accumulated in roots. Reduced transpiration upon seawater exposure may contribute to controlling the movement of toxic ions to leaves and, therefore, can be seen as a mechanism to cope with salinity. The present results indicate that date palm seedlings are tolerant towards seawater exposure to some extent, and highly tolerant to flooding.

Triose phosphate utilization limitation: an unnecessary complexity in terrestrial biosphere model representation of photosynthesis

Triose phosphates are the principal product of photosynthesis. They are used within the chloroplast for starch synthesis, or translocated to the cytosol where they are used to fuel sucrose synthesis. Use of triose phosphate releases inorganic phosphate, and is under strict metabolic control that matches the supply of triose phosphate from the Calvin-Benson cycle to the demand for carbon by sinks (Heldt & Heldt, 2011; McClain & Sharkey, 2019). However, a low rate of triose phosphate utilization (TPU) can deplete the phosphate pool, restrict ATP synthesis and reduce the availability of ATP to power the Calvin-Benson cycle, thereby limiting photosynthesis (Sharkey, 1985).

Mg deficiency induces photo-oxidative stress primarily by limiting CO2 assimilation and not by limiting photosynthetic light utilization

Photosynthetic processes within chloroplasts require substantial amounts of magnesium (Mg). It is suggested that the minimum Mg concentration for yield and dry matter (DM) formation is 1.5 mg g−1 DM. Yet, it was never clarified whether this amount is required for photosynthetic processes as well. The aim of this study was to determine how varying Mg concentrations affect the photosynthetic efficiency and photoprotective responses. Barley (Hordeum vulgare L.) was grown under four different Mg supplies (1, 0.05, 0.025 and 0.015 mM Mg) for 21 days to investigate the photosynthetic and photoprotective responses to Mg deficiency. Leaf Mg concentrations, CO2 assimilation, photosystem II efficiency, electron transport rate, photochemical and non-photochemical quenching, expression of reactive oxygen species (ROS) scavengers, and the pigment composition were analyzed. Our data indicate that CO2 assimilation is more sensitive to the reduction of tissue Mg concentrations than photosynthetic light reactions. Moreover, supply with the two lowest Mg concentrations induced photo-oxidative stress, as could be derived from increased expression of ROS scavengers and an increased pool size of the xanthophyll cycle pigments. We hypothesize, that the reduction of CO2 assimilation is a critical determinant for the increase of photo-oxidative stress under Mg deficiency.

Sequential Applications of Synthetic Auxins and Glufosinate for Escaped Palmer Amaranth Control

Field and greenhouse studies were conducted to investigate the influence of sequence and timing of synthetic auxins and glufosinate on large Palmer amaranth (Amaranthus palmeri) control. Field studies were performed in Henry County, AL where treatments were applied to Palmer amaranth with average heights of 37 and 59 cm in 2018 and 2019, respectively. Sequential applications of 2,4-D/dicamba + glyphosate followed by (fb) glufosinate at labeled rates 3 or 7 days after initial treatment (DAIT) were used in addition to the reverse sequence with a 7-day interval. Time intervals of 3 or 7 days between applications did not influence Palmer amaranth control. Palmer amaranth was controlled 100% by dicamba + glyphosate fb glufosinate and 2,4-D + glufosinate fb glufosinate 7 DAIT in 2018. However, herbicide performance was reduced due to delayed application and taller plants in 2019 with up to 23% less visual injury. To further investigate Palmer amaranth response to dicamba and glufosinate applied sequentially, a greenhouse study was conducted in 2019 where physiological measurements were recorded over a 35-day period. Treatments were applied to Palmer amaranth averaging 38 cm tall and included dicamba + glyphosate fb glufosinate 7 DAIT, the reverse sequence, and a single application of dicamba + glufosinate + glyphosate. Glufosinate severely inhibited mid-day photosynthesis compared to dicamba with up to 90% reductions in CO2 assimilation 1 DAIT. In general, Palmer amaranth respiration and stomatal conductance were not affected by herbicides in this study. Applications of dicamba + glyphosate fb glufosinate 7 DAIT was the only treatment hindered Palmer amaranth regrowth with 52% reduction in leaf biomass compared to nontreated control. These data suggest Palmer amaranth infested fields are more likely to be rescued with sequential applications of synthetic auxins and glufosinate, but consistent control of large Palmer is not probable.

Photochemistry and photoprotection of ‘Gem’ avocado (Persea americana Mill.) leaves within and outside the canopy and the relationship with fruit maturity

A reduction in photosynthesis results in a reduced CO2 assimilation rate and availability of carbohydrates essential for fruit growth and development. This study determined photosynthetic efficiency and photoprotection mechanisms within and outside leaf canopy positions in ‘Gem’ avocado orchards and their relationship with avocado fruit maturity. The study was conducted in a commercial orchard at Everdon Estate in KwaZulu-Natal, South Africa. A total of 15 eight-year-old avocado trees (cv. Gem) were selected in a completely randomised design with three replicates, with each replicate consisting of five trees. Data were collected bi-weekly on photosynthetic rate (A), effective quantum efficiency of photosystem II (ϕPSII), stomatal conductance (gs), transpiration rate (T), electron transport rate (ETR), minimum fluorescence (Fo’), maximum fluorescence (Fm’), variable fluorescence (Fv’), intrinsic water use efficiency (WUEi), instantaneous water use efficiency (WUEins), intercellular CO2 concentration (Ci) and photochemical quenching (qP) from full bloom to fruit physiological maturity (∼25 % dry matter content (DM)). The results showed that leaves from the outside position had higher A (29.46 mol CO2 m−2s-1); gs (0.078 mol CO2 m−2s-1); ΦPS II (0.32); and qP (0.52) compared to those within the canopy position with lower A (19.27 mol CO2 m−2s-1); gs (0.0037 mol CO2 m−2s-1); ΦPS II (0.044) and qP (0.075), respectively. Contrastingly, chlorophyll fluorescence and photoprotection parameters were higher within the canopy than on the outside, suggesting that the greater proportion of energy accumulated within the canopy was used for photoprotection other than photochemistry. Photosynthetic rate (A), gs, Ci, T, WUEi and WUEins, correlated significantly with mesocarp dry matter (DM), while all other parameters correlated poorly. The high photosynthetic efficiency of leaves from outside the canopy resulted in an average DM of 28.9 % compared to 26.9 % of fruit within the canopy. The present findings suggest that reduced photosynthetic efficiency of ‘Gem’ avocado within the canopy position does not compromise fruit DM by reserving more energy for photoprotection; however, it delays maturity by about two weeks.

Interaction Between Induced and Natural Variation at oil yellow1 Delays Reproductive Maturity in Maize

We previously demonstrated that maize (Zea mays) locus very oil yellow1 (vey1) encodes a putative cis-regulatory expression polymorphism at the magnesium chelatase subunit I gene (aka oil yellow1) that strongly modifies the chlorophyll content of the semi-dominant Oy1-N1989 mutants. The vey1 allele of Mo17 inbred line reduces chlorophyll content in the mutants leading to reduced photosynthetic output. Oy1-N1989 mutants in B73 reached reproductive maturity four days later than wild-type siblings. Enhancement of Oy1-N1989 by the Mo17 allele at the vey1 QTL delayed maturity further, resulting in detection of a flowering time QTL in two bi-parental mapping populations crossed to Oy1-N1989. The near isogenic lines of B73 harboring the vey1 allele from Mo17 delayed flowering of Oy1-N1989 mutants by twelve days. Just as previously observed for chlorophyll content, vey1 had no effect on reproductive maturity in the absence of the Oy1-N1989 allele. Loss of chlorophyll biosynthesis in Oy1-N1989 mutants and enhancement by vey1 reduced CO2 assimilation. We attempted to separate the effects of photosynthesis on the induction of flowering from a possible impact of chlorophyll metabolites and retrograde signaling by manually reducing leaf area. Removal of leaves, independent of the Oy1-N1989 mutant, delayed flowering but surprisingly reduced chlorophyll contents of emerging leaves. Thus, defoliation did not completely separate the identity of the signal(s) that regulates flowering time from changes in chlorophyll content in the foliage. These findings illustrate the necessity to explore the linkage between metabolism and the mechanisms that connect it to flowering time regulation.

Lack of FIBRILLIN6 in Arabidopsis thaliana affects light acclimation and sulfate metabolism.

Arabidopsis thaliana contains 13 fibrillins (FBNs), which are all localized to chloroplasts. FBN1 and FBN2 are involved in photoprotection of photosystem II, and FBN4 and FBN5 are thought to be involved in plastoquinone transport and biosynthesis, respectively. The functions of the other FBNs remain largely unknown. To gain insight into the function of FBN6, we performed coexpression and Western analyses, conducted fluorescence and transmission electron microscopy, stained reactive oxygen species (ROS), measured photosynthetic parameters and glutathione levels, and applied transcriptomics and metabolomics. Using coexpression analyses, FBN6 was identified as a photosynthesis-associated gene. FBN6 is localized to thylakoid and envelope membranes, and its knockout results in stunted plants. The delayed-growth phenotype cannot be attributed to altered basic photosynthesis parameters or a reduced CO2 assimilation rate. Under moderate light stress, primary leaves of fbn6 plants begin to bleach and contain enlarged plastoglobules. RNA sequencing and metabolomics analyses point to an alteration in sulfate reduction in fbn6. Indeed, glutathione content is higher in fbn6, which in turn confers cadmium tolerance of fbn6 seedlings. We conclude that loss of FBN6 leads to perturbation of ROS homeostasis. FBN6 enables plants to cope with moderate light stress and affects cadmium tolerance.

Retardation of the Calvin Cycle Contributes to the Reduced CO2 Assimilation Ability of Rice Stripe Virus-Infected N. benthamiana and Suppresses Viral Infection.

Rice stripe virus (RSV) is naturally transmitted by the small brown planthopper and infects plants of the family Poaceae. Under laboratory conditions, RSV can infect Nicotiana benthamiana by mechanical inoculation, providing a useful system to study RSV–plant interactions. Measurements of CO2 assimilation ability and PSII photochemical efficiency showed that these were both reduced in N. benthamiana plants infected by RSV. These plants also had decreased expression of the N. benthamiana Phosphoribulokinases (NbPRKs), the key gene in the Calvin cycle. When the NbPRKs were silenced using the TRV-Virus Induced Gene Silencing system, the plants had decreased CO2 assimilation ability, indicating that the downregulated expression of NbPRKs contributes to the reduced CO2 assimilation ability of RSV-infected plants. Additionally, NbPRKs-silenced plants were more resistant to RSV. Similarly, resistance was enhanced by silencing of either N. benthamiana Rubisco small subunit (NbRbCS) or Phosphoglycerate kinase (NbPGK), two other key genes in the Calvin cycle. Conversely, transgenic plants overexpressing NbPRK1 were more susceptible to RSV infection. The results suggest that a normally functional Calvin cycle may be necessary for RSV infection of N. benthamiana.