Heavy water (D2O) electrolysis is the primary technology for D2 production, playing an irreplaceable role in fields such as nuclear fusion research and isotope tracing. However, the inherent similarity in chemical properties between H2O and D2O (with only a 1.4 °C difference in boiling points) poses significant challenges to their separation. Furthermore, the extremely low natural abundance of D2O (0.015 %) increases the difficulty and cost of separation, while traditional electrolysis and distillation techniques are highly energy intensive. Therefore, there is an urgent need to develop novel adsorbents for efficient and environmentally sustainable H2O/D2O separation. Herein, we used polydentate ligand 2, 5-dihydroxyterephthalic acid (DOBDC) and its derivatives 4,4́-(anthracene-9,10-diyl) bis (2-hydroxybenzoic acid (ABHB) as raw materials to prepare two novel high coordination Sr-MOFs namely IPE-1 and IPE-2, respectively. These MOFs were applied for efficient separation of H2O and D2O at room temperature. X-ray diffraction results reveal that one Sr atom in IPE-1 is coordinated with 9 oxygen atoms. This high coordination number results in the formation of ultra-small rectangular pores of approximately 2.5 Å. Adsorption isotherms of N2, CO2, H2O, and D2O indicate that the ultramicroporous structure of IPE-1 precludes efficient diffusion of CO2 and H2O molecules into the MOF channels. In contrast, the activated IPE-2 exhibits good CO2, H2O, and D2O uptake capacities of 3 mmol/g, 8.38 mmol/g, and 6.51 mmol/g at 298 K, respectively. The Qst values and Ksap values of H2O and D2O indicate that the adsorption rates of H2O were much higher than D2O under 0.2 < P/P0 < 0.7, with a calculated ratio of approximately 1.26. This study not only provides appealing MOFs materials for efficient H2O/D2O separation at room temperature but also provides a new avenue for preparing adsorbents with high stability and high separation performance.