Growth Temperature Range Research Articles

Effects of Climate Change on Temperature Sensitivity of Vegetation Growth in Huang-Huai-Hai Plain: Spatial–Temporal Dynamics and Ecological Adaptability

This paper explores the optimal temperature change in normalized difference vegetation index (NDVI) growth in the Huang-Huai-Hai Plain under the background of climate change, aiming to better cope with the impact of global warming on vegetation growth. The temporal and spatial variation characteristics of the NDVI and temperature factors were analyzed by using the NDVI, average temperature (Tavg), maximum temperature (Tmax) and minimum temperature (Tmin) datasets from 1982 to 2020. Through the Buishand U test and sliding slope detection, 1998 was determined to be a year of abrupt climate change. Furthermore, SHAP important feature analysis, a generalized additive model, correlation analysis, and other methods were used to identify the trend in the optimum temperature of vegetation growth before and after climate change. The results showed that (1) from 1982 to 2020, Tavg, Tmax, Tmin, and the NDVI in Huang-Huai-Hai Plain showed a significant upward trend. At the same time, the spatial distribution of these indicators shows the distribution characteristics of high in the south and low in the north. (2) The NDVI was positively correlated with Tavg, Tmax, and Tmin, and the correlation with Tmin was most significant. (3) The most suitable Tavg, Tmax, and Tmin intervals for vegetation growth were 20~30 °C, 25~35 °C, and 16~25 °C, respectively. (4) The optimum temperature range of vegetation growth was expanded after climate change, and the change rates of the Tavg and Tmax lower limits reached 24% and 25%, respectively, under the best condition of vegetation growth. (5) After abrupt climate change, the temperature suitable for vegetation growth increased significantly in the northern part of the plain but decreased slightly in the southern part.

Molecular beam epitaxy growth of topological insulator Bi4Br4 on silicon for the infrared applications

Bi4Br4 is a material rich in intriguing topological properties. Monolayer Bi4Br4 film exhibits helical edge states characteristic of a quantum spin Hall insulator, while bulk Bi4Br4 represents a higher-order topological insulator with hinge states. However, direct exfoliation from single crystal can only obtain thin nanowires due to the weak van der Waals forces between Bi4Br4 chains, which limits its optical analysis and application, while the growth of Bi4Br4 thin films is also full of challenges due to the extremely narrow growth temperature range and the accurate control of the BiBr3 flux. Here, we reported the controlled growth of α-Bi4Br4 thin films on intrinsic silicon substrates using molecular beam epitaxy. The growth temperature, BiBr3 flux, and the flux ratio of Bi and BiBr3 were accurately controlled. Then, the morphology, composition, and bonding of the prepared films were investigated using atomic force microscopy, X-ray photoelectron spectroscopy and Raman spectroscopy. The growth of large, uniform thin films provides an ideal material platform for studying the physical properties of Bi4Br4. Additionally, we utilized Fourier-transform infrared spectroscopy to explore the film’s infrared characteristics, revealing strong absorption in the low frequency range due to the high proportion of one-dimensional topological edge states and laying the groundwork for further exploration of its potential applications in the optoelectronic field.

Formation temperature of microcrystalline dolomite in oil-rich black shale: Implications for hydrocarbon accumulation in a volcanic-lacustrine rift basin

Lacustrine microcrystalline dolostones in the ancient records have been commonly interpreted as of an evaporitic origin, on the basis of their numerous occurrences in modern evaporative shallow lakes. This interpretation obscures the forming mechanisms of dolostones formed in a deep lacustrine setting, where dolostones interbedded with shale become a focus of hydrocarbon source rocks in recent years. In this study, an alternative non-evaporitic origin of dolomite is interpreted for a Permian lacustrine laminated dolostone. The dolostones are thinly intercalated with tuffaceous shales and composed mainly of volumetrically abundant, low-ordered, subhedral to euhedral, microcrystalline dolomites with a variable amount of pyroclastics. Evidence for evaporation (e.g., the presence of halite, gypsum and shrinkage cracks) and typical methanogenic microfossils is absent. Instead, our dolostones are unevenly and locally distributed as thin beds or lenses and intercalated with tuffaceous shale and have a formation temperature ranging from 31.4 to 73.8 °C, as estimated from dolomite clumped oxygen? isotope thermometry. In addition, the dolostones have a87Sr/86Sr ratio similar to that of the mantle (0.705154 on average) and extremely negative δ18O (−2.9‰ to −24‰) and positive δ13C (5.1‰–10.8‰) values. A lateral trend of increasing formation temperature of the dolostone toward the volcanic center correlates with the trends of: 1) an increasing amount of pyroclastics, euhedral dolomite crystals, Fe, and TOC, and an increasingly positive δEu value, and 2) decreasing values of 87Sr/86Sr and δ18O. The correlation suggests that a local temperature increase and frequent elemental (Fe and Mg) cycling between the conditions of dolomite supersaturation and undersaturation, which are controlled by episodic volcanic-hydrothermal activities are the causes for dolomite nucleation and growth, resulting in the formation of massive dolostone during deposition and shallow burial. The process also affected organic matter accumulation and local transformation to immature or early mature hydrocarbon during deposition and early burial. The results establish a volcanism-controlled temperature range for primary dolomite nucleation and growth, as well as hydrocarbon generation in a deep lake environment during the period of deposition and early burial, and provide insights on shale oil exploration in petroliferous rift basins.

Petrocella pelovolcani sp. nov., an Alkaliphilic Anaerobic Bacterium Isolated from Terrestrial Mud Volcano

Diversity of extremophilic microorganisms in mud volcanoes is largely unexplored. Here we report the isolation of a novel alkaliphilic, mesophilic, fermentative bacterium (strain FN5sucT) from a terrestrial mud volcano located at the Taman Peninsula, Russia. Cells of strain FN5sucT are gram-stain-positive, non-sporeforming, motile rods. The temperature range for growth is 10–37°C, with an optimum at 30°C. The pH range for growth is 7.5–10.0, with an optimum at pH 9.0. The isolate utilizes various organic polymeric substances, organic acids, carbohydrates, and proteinaceous compounds. The end products of carbohydrates fermentation are acetate, CO2 and trace amounts of H2 and formate. The major cellular fatty acid compounds are C16:0, C16:1 ω7c, and monounsaturated dimethyl acetal C14:1. Phylogenetic analysis reveals that strain FN5sucT is most closely related to Petrocella atlantisensis = DSM 105309T (98.4% 16S rRNA gene identity). The total size of the genome of strain FN5sucT is 3.35 Mb, and a genomic DNA G+C content is 37.0 mol %. The genome contains complete glycolisis/glyconeogenesis pathway. We propose to assign strain FN5sucT to the genus Petrocella, as a new species, Petrocella pelovolcani sp. nov. The type strain is FN5sucT (=DSM 113898T = UQM 41591T).

Cognatishimia coralii sp. nov., a marine bacterium isolated from seawater surrounding corals.

Coral reefs are declining due to the rising seawater temperature. Bacteria within and surrounding corals play key roles in maintaining the homeostasis of the coral holobiont. Research on coral-related bacteria could provide benefits for coral reef restoration. During the isolation of coral-associated bacteria, a Gram-stain-negative, motile bacterium (D5M38T) was isolated from seawater surrounding corals in Daya Bay, Shenzhen, PR China. Phylogenetic analysis revealed that strain D5M38T represents a novel species in the genus Cognatishimia. The temperature range for strain D5M38T growth was 10-40 °C, and the optimum temperature was 37 °C. The salinity range for the growth of this isolate was from 0 to 4.0 %, with an optimal salinity level of 0.5 %. The pH range necessary for strain D5M38T growth was between pH 5.0 and 9.0, with an optimal pH being 7.5. The predominant fatty acid was summed feature 8 (65.0 %). The major respiratory quinone was Q-10. The DNA G+C content was 56.8 %. The genome size was 3.88 Mb. The average nucleotide identity (ANI), average amino acid identity (AAI) and digital DNA-DNA hybridization (dDDH) values between strain D5M38T and its two closest neighbours, Cognatishimia activa LMG 29900T and Cognatishimia maritima KCTC 23347T, were 73.2/73.6%, 73.2/73.6% and 19.7/19.5%, respectively. Strain D5M38T was clearly distinct from its closest neighbours C. activa LMG 29900T and C. maritima KCTC 23347T, with 16S rRNA gene sequence similarity values of 97.5 and 97.3 %, respectively. The phylogenetic analysis, along with the ANI, AAI, and dDDH values, demonstrated that strain D5M38T is a member of the genus Cognatishimia, and is distinct from the other two recognized species within this genus. The physiological, biochemical and chemotaxonomic characteristics also supported the species novelty of strain D5M38T. Thus, strain D5M38T is considered to be classified as representing a novel species in the genus Cognatishimia, for which the name Cognatishimia coralii sp. nov. is proposed. The type strain is D5M38T (=MCCC 1K08692T=KCTC 8160T).

Temperature-dependent development and population growth of the invasive pest Cassida vittata vill. In sugar beet crops

The sugar beet flea beetle, Cassida vittata Vill. is an invasive pest that significantly damages sugar beet crops in Morocco by affecting the leaves. To gain a deeper understanding of how temperature influences the development and reproduction of C. vittata and to facilitate its population management, laboratory-based experiments were conducted. Individuals were subjected to a range of constant temperatures spanning from 15 °C to 36 °C. The most extended lifespans for both adult females and males were recorded at 30 °C, with respective longevities of 62.8 and 62.5 days. The highest likelihood of eggs maturing into the adult stage occurred at 25 °C, with survival rates of 39.0% for females and 37.5% for males. Preadult survival rates displayed significant variability with temperature, with the highest survivorship observed at 25 °C (76.5%). The maximum average number of offspring produced per female reached 225.1 eggs at 25 °C. Daily reproduction, maximum total fecundity, and maximum daily fecundity were also notably higher at 25 °C. The population growth parameters exhibited their most favorable values at 25 °C, with r (0.0933 d−1), and R0 (87.15 offspring per female) being highest at this temperature. The temperature thresholds for the complete pre-adult stage (1st instar larva to adult) were estimated to be 9.4 °C for females and 9.0 °C for males. The thermal constants from the 1st instar larva to the adult stage were calculated to be 526.3 and 476.2 DD, respectively. These findings indicate that the most favorable temperature range for the population growth of this invasive pest falls between 25 °C and 30 °C.

Anaerobaca lacustris gen. nov., sp. nov., an obligately anaerobic planctomycete of the widespread SG8-4 group, isolated from a coastal lake, and proposal of Anaerobacaceae fam. nov

One of the numerous and widespread lineages of planctomycetes is the hitherto uncultured SG8-4 group inhabiting anoxic environments. A novel anaerobic, mesophilic, alkalitolerant, chemoorganotrophic bacterium (strain M17dextrT) was isolated from anaerobic sediment of a coastal lake (Taman Peninsula, Russia). The cell were mainly non-motile cocci, 0.3 to 1.0 µm in diameter forming chains or aggregates. The cells had a Gram-negative cell wall and divided by binary fission. The temperature range for growth was 20–37 0C (optimum at 30 0C). The pH range for growth was 6.5–10.0, with an optimum at pH 8.0–8.5. Strain M17dextrT fermented mono-, di- and polysaccharides (starch, xanthan gum, dextran, N-acetylglucosamine), but did not utilized proteinaceous compounds. Major cellular fatty acids were C16:0 and C18:0. The genome of strain M17dextrT had a size of 5.7 Mb with a G + C content of 62.49 %. The genome contained 345 CAZyme genes. The closest cultured phylogenetic relatives of strain M17dextrT were members of the order Sedimentisphaerales, class Phycisphaerae. Among characterized planctomycetes, the highest 16S rRNA gene sequence similarity (88.3 %) was observed with Anaerohalosphaera lusitana. According to phylogenomic analysis strain M17dextrT together with many uncultured representatives of Sedimentisphaerales forms a separate family‐level lineage. We propose to assign strain M17dextrT to a novel genus and species, Anaerobaca lacustris gen. nov., sp. nov.; the type strain is M17dextrT (=VKM B-3571 T = DSM 113417 T = JCM 39238 T = KCTC 25381 T = UQM 41474 T). This genus is placed in a novel family, Anaerobacaceae fam. nov. within the order Sedimentisphaerales.

Liquid phase epitaxy of GaN films on sapphire substrates under an atmospheric pressure nitrogen ambience

GaN films were grown on sapphire substrates using liquid phase epitaxy under an atmospheric pressure nitrogen ambience, employing molten Ga and Fe3N as a source mixture. Single-crystal GaN (0001) films were successfully grown on sapphire (0001) substrates within a growth temperature (T g) range of 750 °C–900 °C. When varying the Fe3N concentration in the range of 0.05–3 mol%, lower iron nitride resulted in high crystallinity of GaN (0001) films. The incorporation of iron atoms in GaN can negatively impact crystal quality. Parameterizing T g at a concentration of 0.1 mol% Fe3N showed that higher T g led to a reduction in the peak width of GaN (0002) X-ray rocking curves. However, at 3 mol%, elevating T g resulted in the degradation of the crystallinity of GaN. This degradation may be attributed to the increased solubility of iron atoms in GaN with increasing T g.

Bismuth surfactant enhancement of surface morphology and film quality of MBE-grown GaSb(100) thin films over a wide range of growth temperatures

We investigate the surface morphologies of two series of homoepitaxial GaSb(100) thin films grown on GaSb(100) substrates by molecular beam epitaxy in a Veeco GENxplor system. The first series was grown at temperatures ranging from 290 to 490°C and serves as a control. The second series was grown using the same growth parameters with bismuth used as a surfactant during growth. We compared the two series to examine the impacts of bismuth over the range of growth temperatures on the GaSb surface morphologies using atomic force microscopy and the film properties using Raman spectroscopy and scanning electron microscopy. High-resolution x-ray diffraction was performed to confirm that bismuth was not incorporated into the films. We found that the morphological evolution of the GaSb series grown without bismuth is consistent with the standard surface nucleation theory and identified the 2D-3D transition temperature as close to 290° C. In contrast, the presence of a Bi surfactant during growth was found to significantly alter the surface morphology and prevent undesired 3D islands at low temperatures. We also observed a preference for hillocks over step morphology at high growth temperatures, antistep bunching effects at intermediate temperatures, and the evolution from step-meandering to mound morphologies at low temperatures. This morphological divergence from the first series indicates that bismuth significantly increases in the 2D Erlich–Schwöebel potential barrier of the atomic terraces, inducing an uphill adatom flux that can smoothen the surface. Our findings demonstrate that bismuth surfactant can improve the surface morphology and film structure of low-temperature grown GaSb. Bismuth surfactant may also improve other homoepitaxial III-V systems grown in nonideal conditions.

Comparative Transcriptome Profiles of the Response of Mycelia of the Genus Morchella to Temperature Stress: An Examination of Potential Resistance Mechanisms.

Temperature and moisture belong to the most important environmental factors affecting the growth and development of fungi. However, the effect of temperature on the mycelia of the edible Morchella mushrooms has not been determined. Here, a comprehensive analysis was performed to determine the influence of culture temperature on 13 strains of mycelia of three Morchella species (Morchella sextelata, Morchella septimelata, and Morchella importuna) at 5 °C, 10 °C, 15 °C, 20 °C, 25 °C, and 30 °C. The mycelial branching and growth rate data showed that 15-20 °C was a suitable temperature range for the mycelial growth of the 13 Morchella strains. RNA sequences revealed that a total of 2843, 2404, 1973, 1572, and 1866 differentially expressed genes (DEGs) were identified at 5 °C, 10 °C, 15 °C, 25 °C, and 30 °C compared with 20 °C. A Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis further indicated that the purine nucleotide and tyrosine metabolism pathways were crucial for mycelium development. Moreover, the enrichment of autophagy of mitochondria, regulation of cell morphogenesis, and piecemeal microautophagy of the nuclei at 25 °C (vs. 20 °C) indicated the damage caused by heat stress in Morchella mycelia. Notably, a total of four unique module eigengenes (MEs) were identified through a weighted gene coexpression network analysis (WGCNA). Among them, 2293 genes in the turquoise module were significantly positively correlated with temperature (r = 0.946, p < 0.001), whereas 739 genes in the blue module were significantly negatively correlated with temperature (r = -0.896, p < 0.001), suggesting that the effect of high temperatures on mycelial genes was significantly greater than that of low temperatures. Moreover, the coexpression network indicated that high culture temperatures accelerated the oxidative stress response and energy metabolism in mycelia, while upregulation of purine nucleotide catabolism and ribosomal protein-related genes were improved by low-temperature tolerance. In addition, the upregulated expression of superoxide dismutase (SOD), catalase (CAT), glutathione peroxidase (GPX), and heat shock protein (HSP) genes in mycelia was associated with reactive oxygen species (ROS)-mediated damage at high temperatures. Overall, this study provides an important theoretical basis and application value for optimizing Morchella cultivation techniques.

The Identification of a Strain for the Biological Purification of Soy Molasses to Produce Functional Soy Oligosaccharides and Optimize Purification Conditions.

Soy molasses is rich in oligosaccharides like sucrose, stachyose, and raffinose, with stachyose and raffinose being functional oligosaccharides. Harnessing soy molasses for the production of functional soy oligosaccharides (FSO) can significantly elevate its value. Biological purification, a method leveraging the selective utilization of different carbon sources by microorganisms, allows for the specific removal of sucrose from soy molasses while preserving stachyose and raffinose, thereby increasing the FSO content. This research identified a yeast named YT312 with strong purification capabilities for soy molasses and optimized the purification conditions. The study revealed that yeast YT312 was Wickerhamomyces anomalus, exhibiting a broad range of growth temperatures and pH levels alongside a high tolerance to glucose, sucrose, and NaCl. Through single-factor and orthogonal experiments, it was established that under specific conditions-0.375% inoculum size, 30 °C fermentation temperature, 150 rpm shaking speed, 10-fold dilution ratio, pH of 7, and 12 h of fermentation-sucrose was completely removed from soy molasses, while functional raffinose and stachyose were retained at rates of 96.1% and 90.2%, respectively. Consequently, W. anomalus YT312 displayed exceptional characteristics for the biological purification of soy molasses and the production of FSO.

Properties of nonlinear optical absorption and refraction of rapidly grown KDP crystals

Potassium dihydrogen phosphate (KDP) single crystals grown under different conditions were obtained by the “point seed” technique. Third-order nonlinear optical properties of type-II samples which were prepared from the pyramidal and prismatic sections of crystal, respectively, were systematically investigated using the Z-scan technique at λ = 532 nm. Some heat-treated samples have been studied simultaneously. The results show that the nonlinear optical absorption and nonlinear optical refraction have been reflected, meanwhile, the nonlinear refractive index (n2) is positive, suggesting the generation of self-focusing effect. Furthermore, the results indicate that the nonlinear absorption and nonlinear refraction were associated with the growth conditions of the crystal. The prismatic sample grown under the relatively low growth temperature range (45∼25 °C) and small supersaturation (4 %) possessed a smaller nonlinear absorption coefficient (β) and n2 (β=4.73 × 10−13 m/W, n2=2.82 × 10−13 esu) than that of the others. In addition, the values of nonlinear absorption and nonlinear refraction of the samples can be further reduced after thermal annealing. These results may provide an assist to understand the mechanism of laser-induced damage of KDP crystals.

Epitaxial Growth of δ‐Ga2O3 Thin Films Grown on YSZ and Sapphire Substrates Using β‐Fe2O3 Buffer Layers via Mist Chemical Vapor Deposition

Herein, epitaxial δ‐Ga2O3 thin films are successfully grown on various planes of yttria‐stabilized zirconia (YSZ) and c‐plane sapphire substrates by inserting the same crystal‐structured β‐Fe2O3 and bcc‐In2O3 buffer layers via mist chemical vapor deposition. X‐ray diffraction (XRD) measurements reveal that various planes of δ‐Ga2O3 thin films are grown in both the out‐of‐plane and in‐plane orientations using the same crystal‐structured buffer layers to reduce the lattice mismatch. δ‐Ga2O3 (111) is demonstrated to grow on the YSZ (111) in the narrow growth temperature range of 575–675 °C due to thermal instability of β‐Fe2O3 buffer layers. Next, a c‐plane sapphire wafer as a substrate using two buffer layers for the growth of δ‐Ga2O3 is investigated. XRD 2θ–ω scan reveals that the mixture of α‐ and δ‐Ga2O3 thin films is grown on Fe2O3/In2O3/c‐plane sapphire. This is because the Fe2O3 buffer layers are phase separated into α and β phases due to the large grain size of the In2O3 buffer layer. XRD φ‐scan profiles indicate that the δ‐Ga2O3 thin film grown on sapphire is composed of a twin domain. This study contributes to our understanding of the growth mechanism of δ‐Ga2O3 and its future applications in devices.

Genome sequencing and metabolic network reconstruction of a novel sulfur-oxidizing bacterium Acidithiobacillus Ameehan.

Sulfur-oxidizing bacteria play a crucial role in various processes, including mine bioleaching, biodesulfurization, and treatment of sulfur-containing wastewater. Nevertheless, the pathway involved in sulfur oxidation is highly intricate, making it complete comprehension a formidable and protracted undertaking. The mechanisms of sulfur oxidation within the Acidithiobacillus genus, along with the process of energy production, remain areas that necessitate further research and elucidation. In this study, a novel strain of sulfur-oxidizing bacterium, Acidithiobacillus Ameehan, was isolated. Several physiological characteristics of the strain Ameehan were verified and its complete genome sequence was presented in the study. Besides, the first genome-scale metabolic network model (AMEE_WP1377) was reconstructed for Acidithiobacillus Ameehan to gain a comprehensive understanding of the metabolic capacity of the strain.The characteristics of Acidithiobacillus Ameehan included morphological size and an optimal growth temperature range of 37-45°C, as well as an optimal growth pH range of pH 2.0-8.0. The microbe was found to be capable of growth when sulfur and K2O6S4 were supplied as the energy source and electron donor for CO2 fixation. Conversely, it could not utilize Na2S2O3, FeS2, and FeSO4·7H2O as the energy source or electron donor for CO2 fixation, nor could it grow using glucose or yeast extract as a carbon source. Genome annotation revealed that the strain Ameehan possessed a series of sulfur oxidizing genes that enabled it to oxidize elemental sulfur or various reduced inorganic sulfur compounds (RISCs). In addition, the bacterium also possessed carbon fixing genes involved in the incomplete Calvin-Benson-Bassham (CBB) cycle. However, the bacterium lacked the ability to oxidize iron and fix nitrogen. By implementing a constraint-based flux analysis to predict cellular growth in the presence of 71 carbon sources, 88.7% agreement with experimental Biolog data was observed. Five sulfur oxidation pathways were discovered through model simulations. The optimal sulfur oxidation pathway had the highest ATP production rate of 14.81 mmol/gDW/h, NADH/NADPH production rate of 5.76 mmol/gDW/h, consumed 1.575 mmol/gDW/h of CO2, and 1.5 mmol/gDW/h of sulfur. Our findings provide a comprehensive outlook on the most effective cellular metabolic pathways implicated in sulfur oxidation within Acidithiobacillus Ameehan. It suggests that the OMP (outer-membrane proteins) and SQR enzymes (sulfide: quinone oxidoreductase) have a significant impact on the energy production efficiency of sulfur oxidation, which could have potential biotechnological applications.

Computational fluid dynamics simulation of earth air heat exchanger combined with the Quonset type greenhouse to develop a sustainable controlled environment

The current study aims to evaluate the performance of an earth air heat exchanger (EAHE) combined with a Quonset-type greenhouse in a summer climate to create a controlled environment for optimum crop development and energy efficiency. The integrated systems thermal performance and airflow patterns are analyzed using computational fluid dynamics (CFD) models. The result shows that greenhouse room air can be satisfactorily achieved in the comfortable temperature range (27–37 ℃) for plant growth by combined EAHE even during the hottest summer days. EAHE reduces greenhouse temperature with a minimum temperature gradient of 17 °C between the ambient and air at the exit of EAHEs after the heat exchanging process. It is observed from the analysis that as the flow rate of air entering into EAHE increases, the greenhouse room's temperature decreases up to 0.5 kg/s; after that, there is no significant change in temperature, which makes 0.5 kg/s the recommended flow rate for the model used in the simulation. Pressure loss is reduced in a multi-pipe EAHE system compared to a single-pipe system. This advantage can increase energy efficiency and lower operating costs in greenhouse cooling. The Quonset GiTPV system generates 29.22 kWh of electrical energy daily, making it self-sustaining.

Microscopic study of submonolayer nucleation characteristics during GaN (0001) homoepitaxial growth

An on-lattice kinetic Monte Carlo model is constructed to investigate microscopic nucleation behavior during the submonolayer epitaxial growth of GaN islands, where the Ga and N atoms are treated as the basic particles. The input kinetic parameters of Ga and N, including their surface diffusion energy barriers, were obtained from previous ab initio calculations. Furthermore, a simple and effective bond counting rule is applied in our kinetic Monte Carlo model, and the statistics of the GaN islands on the surface are realized via the application of the Hoshen–Kopelman algorithm. The growth temperature range covers the typical growth temperatures used in the molecular beam epitaxy of GaN. The results obtained show that triangular GaN flakes are observed and that the shapes of the GaN islands remain triangular when the growth temperature is changed. Additionally, the power law for the maximum density of islands versus the ratio of the effective diffusion to the deposition rate is obtained; the exponent of this law is −0.506 ± 0.006, indicating that these triplets represent the seeds required for further nucleation. Finally, the coexistence of the Ga-edge and N-edge types of triangular GaN islands is observed. The island formation mechanism is attributed to a local monomer density misbalance, and it is also shown that a slight variation in the Ga/N ratio in the deposition flux changes the proportion of the Ga-edge and N-edge type triangles; this represents a further indication that controllable GaN morphologies can be obtained by tuning the chemical potentials of the constituent elements.

Calibration of the carbonate clumped isotope thermometer of land snail shells

The application of carbonate clumped isotopes (Δ47) as a temperature proxy has been widely investigated in many types of carbonate materials, including biogenic carbonates such as foraminifera and corals. However, their application to land snails is relatively rare and it remains controversial whether shell carbonate Δ47 is impacted by biologically-driven fractionation. These uncertainties may stem from the lack of precise temperature-controlled calibration samples in previous natural-environment-based studies. In this study we cultured two species of land snail with different environmental tolerances: the thermo-humidiphilous Achatina fulica (A. fulica), and the cold-aridiphilous Cathaica fasciola (C. fasciola), under strictly controlled temperature conditions, covering the growth temperature range of 15–33 °C. The results show that the shell Δ47 values for both A. fulica and C. fasciola had statistically significant negative correlations with the culturing temperature within their respective optimum temperature ranges (A. fulica: 25–33 °C, C. fasciola: 15–25 °C). However, shell Δ47 values for A. fulica at lower temperatures (20 °C in this study) and those for C. fasciola showed a negative deviation from the expected equilibrium values. We attribute the lower-than-equilibrium values to the existence of a vital effect in individual snail species, and more specifically, to the CO2 degassing associated with dehydration/dehydroxylation during carbonate precipitation in the snail's calcifying fluid.

Pathogenecity testing of indigenous Bacillus thuringiensis isolates against chickpea pod borer, Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) in Ethiopia

Helicoverpa armigera (Hübner) is the most significant insect pest of chickpea in Ethiopia. Sole reliance on insecticide causes both human and environmental health problems. A common soil bacterium, Bacillus thuringiensis used as a bioinsecticide to control numerous Lepidopteran larvae. Therefore, indigenous isolates were collected, screened, tested for pathogenicity against H. armigera with a reference Bacillus. var. thuringiensis. From 121 soil samples collected, 23 Bacillus species were isolated and purified. Bt index ranged from 0.33 to 1.00 and the mean was 0.73 average Bt index. Absorbance values ranged from 0.46 to 0.98. Screening biotoxicity assay was conducted at the rate of 1 mL against 3rd instar larvae of H. armigera. Experiments were replicated three times; ten larvae were used per replicate and reputed thrice. Ten indigenous Bt isolates were screened based on larval mortality which ranged between 27.78% and 75.83% and LT50 values of 45.71–143.9 h. The highest mortality of 75.83% and LT50 of 45.71 h was recorded from reference Bt followed by indigenous Bt isolate KDL with mortality percentage of 69.16% and LT50 of 48.49 h. Statistically no significant difference was observed among the tested bacterial isolates. Biotoxicity assay was conducted at five concentrations ranging from 0.25 to 2 mL. The LD50 and LD 90 values were 0.84–1.24 mL and 1.54–1.98 mL, respectively. The lowest LD50, 90 of 0.84 mL and 1.54 mL were recorded from KDL Bt isolate compared to reference Bt whose LD50 and LD90 were 0.84 mL and 1.66 mL. Results of Bt growth under varied values of temperature ranged from 15oC to 40 °C. All the Bt isolates showed growth at all the values of the tested temperatures with steady growth from 15 °C to 20 °C and uniform growth observed from 20 °C to 30 °C. After 35 °C, the growth of all the Bt isolates declined indicating that 30 °C–35 °C is the optimum growth temperature range. Protein content ranged from 0.43 to 0.97 (mg/mL). However, protein content and larval mortality was not linearly correlated. It was concluded that all the tested indigenous Bacillus isolates were virulent enough and identified as a promising candidate bioinsecticide against H. armigera. Hence, recommended for further intensive evaluations under greenhouse and field trails.

Thermophilic methane oxidation is widespread in Aotearoa-New Zealand geothermal fields.

Geothermal areas represent substantial point sources for greenhouse gas emissions such as methane. While it is known that methanotrophic microorganisms act as a biofilter, decreasing the efflux of methane in most soils to the atmosphere, the diversity and the extent to which methane is consumed by thermophilic microorganisms in geothermal ecosystems has not been widely explored. To determine the extent of biologically mediated methane oxidation at elevated temperatures, we set up 57 microcosms using soils from 14 Aotearoa-New Zealand geothermal fields and show that moderately thermophilic (>40°C) and thermophilic (>60°C) methane oxidation is common across the region. Methane oxidation was detected in 54% (n = 31) of the geothermal soil microcosms tested at temperatures up to 75°C (pH 1.5-8.1), with oxidation rates ranging from 0.5 to 17.4 μmol g-1 d-1 wet weight. The abundance of known aerobic methanotrophs (up to 60.7% Methylacidiphilum and 11.2% Methylothermus) and putative anaerobic methanotrophs (up to 76.7% Bathyarchaeota) provides some explanation for the rapid rates of methane oxidation observed in microcosms. However, not all methane oxidation was attributable to known taxa; in some methane-consuming microcosms we detected methanotroph taxa in conditions outside of their known temperature range for growth, and in other examples, we observed methane oxidation in the absence of known methanotrophs through 16S rRNA gene sequencing. Both of these observations suggest unidentified methane oxidizing microorganisms or undescribed methanotrophic syntrophic associations may also be present. Subsequent enrichment cultures from microcosms yielded communities not predicted by the original diversity studies and showed rates inconsistent with microcosms (≤24.5 μmol d-1), highlighting difficulties in culturing representative thermophilic methanotrophs. Finally, to determine the active methane oxidation processes, we attempted to elucidate metabolic pathways from two enrichment cultures actively oxidizing methane using metatranscriptomics. The most highly expressed genes in both enrichments (methane monooxygenases, methanol dehydrogenases and PqqA precursor peptides) were related to methanotrophs from Methylococcaceae, Methylocystaceae and Methylothermaceae. This is the first example of using metatranscriptomics to investigate methanotrophs from geothermal environments and gives insight into the metabolic pathways involved in thermophilic methanotrophy.

First Record of the Edible Mushroom Lepista sordida in Western Algerian Forest: Nutritional Value and Physicochemical Parameters of Mycelial Culture.

The exploration of the western forests of Algeria led to the remarkable discovery of the first occurrence of Lepista sordida, an edible wild mushroom of significant culinary importance for the local community, traditionally consumed in its natural state. This discovery was made possible through the use of various methods, including macroscopic observations (revealing a violet color) as well as microscopic observations conducted using scanning electron microscopy (SEM), revealing a cylindrical shape with distinct contours. Additionally, molecular analyses were conducted. Genomic DNA was extracted from the mycelium, followed by DNA amplification using specific primers targeting the internal transcribed spacer region (ITS1 and ITS2). After PCR reactions and sequencing of the obtained amplicons, the nucleotide sequences of the mycelium were submitted to the GenBank database of NCBI with the assigned accession number: MZ928450.1. These sequences were subsequently used to construct the phylogenetic tree. Furthermore, an in-depth study of physicochemical parameters was undertaken to determine the optimal conditions for cultivating the mycelium of this edible wild mushroom, including pH, temperature, relative humidity, and light. Different temperatures were examined: 20, 25, 30, 35, 40, and 45 °C. The effect of pH on mycelium growth was studied using a PDA agar medium with buffered values of 4, 5, 5.6, 6, 7, and 8. Similarly, six levels of relative humidity were tested: 14, 50, 74, 80, 95, and 100%. A study on the impact of light on mycelium growth was conducted by exposing Petri dishes inoculated with PDA to a light intensity of 500 lux for 5, 10, 15, 20, and 24 h. The results clearly demonstrated that variations in these different physicochemical parameters significantly influenced mycelium growth. For the Lepista sordida strain, growth was favored at pH levels of 4, 5, 6, and 6, with no growth observed at pH 7 and 8. The optimal temperature range for mycelium growth of Lepista sordida was 20-25 °C, while no growth was observed at 30, 35, 40, and 45 °C. Relative humidity levels of 74, 80, and 95% showed no significant differences. Optimization of mycelium growth and primordia production in Lepista sordida were successfully achieved. Optimal conditions for the primordia phase were identified as 25 °C, with humidity ranging from 90 to 95%. A nutritional analysis of fresh sporophores was conducted using established analytical methods. Notably, the nutritional composition of Lepista sordida sporophores exhibited high significance for the following parameters: moisture content (67.23 ± 1.90%), ash content (9.35 ± 0.66%), fat content (3.25 ± 0.24%), protein content (17.22 ± 0.38%), and carbohydrate content (63.83 ± 1.23%).