Pygmy Shrew Research Articles

СООБЩЕСТВА МЕЛКИХ МЛЕКОПИТАЮЩИХ СЕВЕРНОЙ ЛЕСОСТЕПИ ТОБОЛО-ИШИМСКОГО МЕЖДУРЕЧЬЯ

The paper summarises the material on the communities of small mammals in the northern forest-steppe of the Tobol-Ishim interfluve (the South Trans-Ural region). A brief history of the study of this group of animals is reviewed. The use of two accounting methods (cones with guide systems and trap lines) made it possible to identify the species composition most fully. 18 species of insectivores and rodents have been registered in the studied territory. At the same time, the species composition, the group of background and dominant species, and the indicators of the total abundance of small mammals in the studied territory were largely determined by the specifics of the animal accounting method. The core of small mammals of the northern forest-steppe of the Tobolo-Ishim interfluve consisted of species tending to moistened habitats – common and pigmy shrew. In general, regardless of the method of accounting animals, they were characterized by low abundance in the study period.

Lack of detection of SARS-CoV-2 in British wildlife 2020-21 and first description of a stoat (Mustela erminea) Minacovirus.

Repeat spillover of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) into new hosts has highlighted the critical role of cross-species transmission of coronaviruses and establishment of new reservoirs of virus in pandemic and epizootic spread of coronaviruses. Species particularly susceptible to SARS-CoV-2 spillover include Mustelidae (mink, ferrets and related animals), cricetid rodents (hamsters and related animals), felids (domestic cats and related animals) and white-tailed deer. These predispositions led us to screen British wildlife with sarbecovirus-specific quantitative PCR and pan coronavirus PCR assays for SARS-CoV-2 using samples collected during the human pandemic to establish if widespread spillover was occurring. Fourteen wildlife species (n=402) were tested, including: two red foxes (Vulpes vulpes), 101 badgers (Meles meles), two wild American mink (Neogale vison), 41 pine marten (Martes martes), two weasels (Mustela nivalis), seven stoats (Mustela erminea), 108 water voles (Arvicola amphibius), 39 bank voles (Myodes glareolous), 10 field voles (Microtus agrestis), 15 wood mice (Apodemus sylvaticus), one common shrew (Sorex aranaeus), two pygmy shrews (Sorex minutus), two hedgehogs (Erinaceus europaeus) and 75 Eurasian otters (Lutra lutra). No cases of SARS-CoV-2 were detected in any animals, but a novel minacovirus related to mink and ferret alphacoronaviruses was detected in stoats recently introduced to the Orkney Islands. This group of viruses is of interest due to pathogenicity in ferrets. The impact of this virus on the health of stoat populations remains to be established.

Invasion of farmland hedgerows by non-native small mammals is associated with lower soil surface invertebrate diversity, abundance, body size and biomass

Small mammals in farmland hedgerows feed on soil surface invertebrates with non-native invasive species potentially affecting prey species and populations. We investigated terrestrial invertebrates using pitfall traps and leaf litter samples across four zones of invasion in Ireland: (1) native species only (wood mouse Apodemus sylvaticus and pygmy shrew Sorex minutus), (2) natives plus the non-native bank vole (Myodes glareolus), (3) natives plus the non-native greater white-toothed shrew (Crocidura russula) and (4) natives plus both. After accounting for regional and local environmental variation, small mammal invasion was associated with lower invertebrate species richness (9–39% lower than uninvaded zones), reduced abundance (18–56% lower), shorter arthropod body length (24–52% shorter) and lower arthropod biomass (63–89% lower). Negative effects were observed on a wide range of disparate functional groups spanning phytophagous, detritivorus, zoophagous and omnivorous taxa including: the Staphylinidae, Carabidae and Coleoptera larvae, Isopoda, Diplopoda, Diptera, Hymenoptera, Pulmonata and Acari. The greater white-toothed shrew had greater negative effects than the bank vole with presence of both having greater effects than either alone though the majority of their combined effects were largely attributable to the former. The bank vole may mitigate some of the negative effects of the greater white-toothed shrew on invertebrate abundance perhaps indicating of some form of trophic interaction. Predation of detritivores and large invertebrate predators may impact farmland ecosystem service delivery i.e. nutrient cycling and pest biocontrol. Hedgerow biodiversity loss may induce indirect trophic cascades negatively impacting other taxa including farmland birds.

Patterns of fatty acid usage in two nocturnal insectivores: the Mediterranean house gecko (Hemidactylus turcicus) and the Etruscan pygmy shrew (Suncus etruscus).

Dietary fatty acids (FAs) have been demonstrated to be differentially stored or used as a metabolic fuel, depending on carbon chain length or saturation level. However, intestinal absorption also differs among FAs, potentially biasing conclusions on functional differences and their subsequent implications. We tested dietary FA usage in a nocturnal insectivorous reptile and a nocturnal insectivorous mammal of similar size: the gecko Hemidactylus turcicus and the shrew Suncus etruscus. We compared the relative presence of 13C isotopes in breath and feces following ingestion of three isotopically enriched fatty acids: linoleic acid (a polyunsaturated FA), oleic acid (monounsaturated) and palmitic acid (saturated). Both species oxidized linoleic and oleic acids at much higher levels than palmitic acid. Egestion of palmitic acid in feces was much higher than that of linoleic and oleic acids. The major difference between geckos and shrews was that the latter digested fatty acids much faster, which was best explained by the difference in the metabolic rates of the species. Circadian differences were evident for gecko metabolic and FA oxidation rates, peaking at night; for shrews, peak oxidation was achieved faster at night but rates did not differ. Our study is among the first to integrate oxidation and absorption patterns, as well as metabolic rates and their rhythms, providing important insights into the utilization of different dietary FAs in different species.

How scaling approaches can reveal fundamental principles in physiology and biomechanics

Among terrestrial mammals, the largest, the 3tonne African elephant, is one-million times heavier than the smallest, the 3g pygmy shrew. Body mass is the most obvious and arguably the most fundamental characteristic of an animal, impacting many important attributes of its life history and biology. Although evolution may guide animals to different sizes, shapes, energetic profiles or ecological niches, it is the laws of physics that limit biological processes and, in turn, affect how animals interact with their environment. Consideration of scaling helps us to understand why elephants are not merely scaled-up shrews, but rather have modified body proportions, posture and locomotor style to mitigate the consequences of their large size. Scaling offers a quantitative lens into how biological features vary compared with predictions based on physical laws. In this Review, we provide an introduction to scaling and its historical context, focusing on two fields that are strongly represented in experimental biology: physiology and biomechanics. We show how scaling has been used to explore metabolic energy use with changes in body size. We discuss the musculoskeletal and biomechanical adaptations that animals use to mitigate the consequences of size, and provide insights into the scaling of mechanical and energetic demands of animal locomotion. For each field, we discuss empirical measurements, fundamental scaling theories and the importance of considering phylogenetic relationships when performing scaling analyses. Finally, we provide forward-looking perspectives focused on improving our understanding of the diversity of form and function in relation to size.

Predation on a pygmy shrew, Sorex minutus, by the noble false widow spider, Steatoda nobilis

AbstractThe noble false widow spider Steatoda nobilis is a globally invasive species with implications for public health and possibly for native ecosystems. Here, we report on a case of predation on a protected species of vertebrate, a pygmy shrew Sorex minutus in Britain. The importance and novelty of this report are: (1) this is the third documented case of S. nobilis preying on a vertebrate in five years, suggesting that small vertebrates are likely to be a more frequent component of their diet than previously thought; (2) this is the first case of a Theridiidae spider preying on a shrew in Britain; and (3) this is the first case of predation on shrews by the genus Steatoda globally. Overall, S. nobilis fits the profile of a habitual vertebrate‐eating spider.

A Kist o’ Whistles

A Kist o’ Whistles

Resource competition drives an invasion-replacement event among shrew species on an island.

Invasive mammals are responsible for the majority of native species extinctions on islands. While most of these extinction events will be due to novel interactions between species (e.g. exotic predators and naive prey), it is more unusual to find incidences where a newly invasive species causes the decline/extinction of a native species on an island when they normally coexist elsewhere in their overlapping mainland ranges. We investigated if resource competition between two insectivorous small mammals was playing a significant role in the rapid replacement of the native pygmy shrew Sorex minutus in the presence of the recently invading greater white-toothed shrew Crocidura russula on the island of Ireland. We used DNA metabarcoding of gut contents from >300 individuals of both species to determine each species' diet and measured the body size (weight and length) during different stages of the invasion in Ireland (before, during and after the species come into contact with one another) and on a French island where both species have long coexisted (acting as a natural 'control' site). Dietary composition, niche width and overlap and body size were compared in these different stages. The body size of the invasive C. russula and composition of its diet changes between when it first invades an area and after it becomes established. During the initial stages of the invasion, individual shrews are larger and consume larger sized invertebrate prey species. During later stages of the invasion, C. russula switches to consuming smaller prey taxa that are more essential for the native species. As a result, the level of interspecific dietary overlap increases from between 11% and 14% when they first come into contact with each other to between 39% and 46% after the invasion. Here we show that an invasive species can quickly alter its dietary niche in a new environment, ultimately causing the replacement of a native species. In addition, the invasive shrew could also be potentially exhausting local resources of larger invertebrate species. These subsequent changes in terrestrial invertebrate communities could have severe impacts further downstream on ecosystem functioning and services.

Large Mammals Have More Powerful Antibacterial Defenses Than Expected from Their Metabolic Rates.

AbstractTerrestrial mammals span seven orders of magnitude in body size, ranging from the <2-g Etruscan pygmy shrew (Suncus etruscus) to the >3,900-kg African elephant (Loxodonta africana). Although body size profoundly affects the behavior, physiology, ecology, and evolution of species, how investment in functional immune defenses changes with body size across species is unknown. Here, we (1) developed a novel 12-point dilution curve approach to describe and compare antibacterial capacity against three bacterial species among >160 terrestrial species of mammals and (2) tested published predictions about the scaling of immune defenses. Our study focused on the safety factor hypothesis, which predicts that broad, early-acting immune defenses should scale hypermetrically with body mass. However, our three statistical approaches demonstrated that antibacterial activity in sera across mammals exhibits isometry; killing capacity did not change with body size across species. Intriguingly, this result indicates that the serum of a large mammal is less hospitable to bacteria than would be predicted by its metabolic rates. In other words, if metabolic rates underlie the rates of physiological reactions as postulated by the metabolic theory of ecology, large species should have disproportionately lower antibacterial capacity than small species, but they do not. These results have direct implications for effectively modeling the evolution of immune defenses and identifying potential reservoir hosts of pathogens.

Notes on the Non-flying Mammalian Fauna Characterizing both Sides of the Green Line; the De Facto Border between the Gaza Strip and Historic Palestine

In spite of its small area, Palestine (27,000 km2) is home to diverse forms of flying and non-flying mammalian fauna. The 365 km2 Gaza Strip (about 1.5% of historic Palestine), which is located in the far southwest of Palestine, represents a strip isolated from the rest of the Palestinian territories occupied in 1948 by the so-called Green Line. The Green Line is currently supported by the so-called smart security wall, which would impede the ecological communication between the Gaza Strip and the rest of the lands of historic Palestine. This study aims to identify the non-flying mammalian fauna existing on both sides of the Green Line through field visits, interviews with border residents, zoo owners and wildlife hunters, and photographing hunted species. The results revealed at least 21 species of non-flying mammals belonging to 14 families and 5 orders marked both sides of the Green line. This number may change in the future depending on the development of scientific studies or the occurrence of any geopolitical and military changes in the region. Order Carnivora was the biggest and represented 42.9% of the species recorded, followed by the orders Rodentia (23.9%), Artiodactyla (14.3%), Eulipotyphla or Insectivora (14.3%) and Lagomorpha (4.7%). Most of the recorded mammals were located on both sides of the Green Line, with the exception of the Striped Hyena (Hyaena hyaena) and Wild Boar (Sus scrofa), which have not yet been able to infiltrate and cross the Gaza Strip borders. A decade ago, the Red Fox (Vulpes vulpes) began breeding in separate parts of the Gaza Strip. The Etruscan Pygmy Shrew (Suncus etruscus) is, by far, the smallest non-flying mammal recorded in the Gaza Strip. All recorded mammals were subjected to poaching and hunting by wildlife hunters, and some species were deposited in private zoos that are spread in the Gaza Strip. It appears that the Negev Desert in southern Palestine and the Gaza Envelope which border the Gaza Strip to the East and North, represent an important depth for the influx of many wild mammals to the Gaza Strip across the Green Line. In conclusion, the study recommends the necessity of controlling the poaching and hunting of various forms of wildlife, whether they are present in the Gaza Strip or coming to it across the Green Line in order to preserve Palestinian biodiversity in a sustainable manner.

Repellent effect of synanthropic house mouse urine odor on small forest mammals.

In this study, we examined the effect of synanthropic house mouse (Mus musculus) urine odor on catching probability of small mammals to live traps. We conducted a series of field experiments in August 2016 and 2017 in a natural forests of the northwestern Moscow Region (Russia). Small mammals were trapped at two 4-ha fields using capture-mark-recapture technique by setting 200 live traps (100 points, 2 traps per point) within each field. One trap in each pair was odorless (control) with bait only, whereas the other one was odor-baited with 20 μL of the urine of a synanthropic house mouse. Further analysis was based on the data collected from 2 rodent species (bank vole Myodes glareolus, herb field mouse Apodemus uralensis) and 3 shrew species (common shrew Sorex araneus, Laxmann's shrew Sorex caecutiens, and Eurasian pygmy shrew Sorex minutus). As a result, only bank voles significantly avoided odor-baited live traps. Using generalized linear mixed models, we showed that the choice of a trap by bank voles depended on their age, whereas the probability of repeated capture to a certain live trap was related to their prior experience. We discuss the possible role of components of synanthropic house mouse urine in the population management of exoanthropic small mammals.

Diversity of Borrelia burgdorferi sensu lato in ticks and small mammals from different habitats

BackgroundIxodid ticks are important vectors for zoonotic pathogens, with Ixodes ricinus being the most important in Europe. Rodents are hosts of immature life stages of I. ricinus ticks and are considered main reservoirs for tick-borne pathogens, e.g. Borrelia burgdorferi. The aim of this study was to analyse the prevalence as well as genospecies and sequence type (ST) diversity of Borrelia burgdorferi sensu lato in ticks and small mammals from central Germany and to elaborate on the influence of environmental and/or individual host and vector factors on Borrelia prevalence.MethodsAfter species identification, 1167 small mammal skin samples and 1094 ticks from vegetation were screened by B. burgdorferi sensu lato real-time polymerase chain reaction, and positive samples were characterized by multilocus sequence typing. Generalized linear (mixed) models were used to estimate how seasonality, small mammal species/tick life stage and habitat affect individual infection status.ResultsIn total, 10 small mammal species and three tick species, Ixodes ricinus, Ixodes inopinatus (both considered members of the I. ricinus complex) and Dermacentor reticulatus, were investigated. Borrelia DNA was detected in eight host species, i.e. the striped field mouse (Apodemus agrarius), the yellow-necked field mouse (Apodemus flavicollis), the wood mouse (Apodemus sylvaticus), the water vole (Arvicola amphibius), the bank vole (Clethrionomys glareolus), the field vole (Microtus agrestis), the common vole (Microtus arvalis), and the common shrew (Sorex araneus). Two species were Borrelia negative, the greater white-toothed shrew (Crocidura russula) and the pygmy shrew (Sorex minutus). The average prevalence was 6.2%, with two genospecies detected, Borrelia afzelii and Borrelia garinii, and at least three STs that had not been previously reported in small mammals. Borrelia prevalence in small mammals did not differ between seasons. Six genospecies of Borrelia—Borrelia afzelii, Borrelia valaisiana, Borrelia garinii, Borrelia lusitaniae, Borrelia spielmanii, and Borrelia burgdorferi sensu stricto—and 25 STs of Borrelia, of which 12 have not been previously described at all and five have not been previously reported in Germany, were detected in 13% of I. ricinus complex ticks. Prevalence was highest in adult females (25.3%) and lowest in nymphs (11.4%). Prevalence was significantly higher in ticks from grassland (16.8%) compared to forests (11.4%).ConclusionsThe high level of small mammal diversity in this region of Germany seems to be reflected in a wide variety of genospecies and STs of B. burgdorferi.Graphical abstract

Long-distance dispersal of two species of shrews (Sorex caecutiens Laxmann, 1788 and Sorex minutus Linnaeus, 1766)

Abstract Data on the dispersal of shrews are still rare, and for some species of Soricidae these are not available at all. Group marking with bait containing rhodamine B was used to study the dispersal of two species of shrews – Laxmann’s shrew (Sorex caecutiens) and pygmy shrew (Sorex minutus) in the Middle Urals (Russia). Twelve Laxmann’s shrews moved straight-line distances ranging from 80 to 4500 m. Five pygmy shrews dispersed from 475 to 2570 m. The are first field data obtained on dispersal distances of the pygmy shrew. The reported dispersal distances of the Laxmann`s shrew are the maximum known for this species.

Scaling of Antibacterial Immune Defenses in Mammals

Terrestrial mammals span 7 orders of magnitude in body size, ranging from the &lt; 2 g pygmy shrew (Suncus etruscus) to the &gt; 3900 kg African elephant (Loxodonta africana). Although body size profoundly affects the behavior, physiology, ecology, and evolution of species, how investment in immune defenses changes with body size across species is unknown. Comparative immunology studies are often limited because of reagents or because assays are calibrated for a specific species. We developed a novel 12‐point dilution‐curve approach to compare complement‐mediated antibacterial capacity against 3 diverse bacterial species (Escherichia coli, Salmonella enterica, Micrococcus luteus) among &gt;160 terrestrial species of mammals. We tested published predictions about the scaling of immune defenses, focusing on the Safety Factor Hypothesis, which predicts that broad, early‐acting immune defense should scale hypermetrically with body mass. Multivariate linear mixed models using Markov chain Monte Carlo techniques demonstrate that antibacterial activity across mammals exhibited isometry (scaling coefficient = 0), regardless of the bacterial species used in the challenge. For example, the antibacterial ability of a specific dilution scaled isometrically when serum was tested against E. coli(b95% Credible Intervals =‐0.144 : 0.044), S. enterica (b = ‐0.102 : 0.061), and M, luteus (b = ‐0.401 : 0.177). Therefore, body size was unrelated to killing capacity across species. Intriguingly, these results indicate that the serum of large mammals was less hospitable to bacteria than would be predicted by their metabolic rates. That is, if metabolic rates restrict the rate of organismal reactions as postulated by the Rate of Metabolism Hypothesis, large species should have disproportionately lower antibacterial capacity than small species, but they do not. These results have direct implications for effectively modeling the evolution of immune defenses and identifying potential reservoir hosts of zoonotic pathogens. This work was supported by the National Science Foundation (award numbers IOS 1656551 to C.J.D. and IOS 1656618 to L.B.M), and the authors have no competing interests to declare.

Население мелких млекопитающих подтайги Южного Зауралья

On the basis of materials obtained using two generally accepted counting methods, data on the species composition of small mammals, the ratio of background and dominant species, the total abundance in the main groups of biotopes of the South Trans-Ural region are presented. The differences in the community structure of small mammals in the subtaiga and forest-steppe sub-zone of the South Trans-Ural region have been analysed. The paper discusses materials on the community of small mammals in the sub-taiga of the South Trans-Ural region. A brief history of the study of this group of animals is reviewed. The use of two counting methods (the ditch with pitfalls and trap-lines) allowed the most complete identification of the species composition of insectivores and rodents in the sub-taiga of the South Trans-Ural region in 2021. In terms of species, the ditch with pitfalls were more effective, with 17 species identified; trap-lines counted 13 species. The abundance of animals in 2021 was very low. In our opinion, was determined by the abnormally hot spring and summer period. On average, only rare and very rare species have been recorded in the snap-trap counts in the study area. Numerous species were absent in the average meaning regardless of the method of capture. The core of small mammals of the sub-taiga of the South Trans-Ural region consisted of species typical of humid habitats and small-leaved forests, such as the Laxmann's shrew Sorex caecutiens, common shrew S. araneus and Eurasian pygmy shrew S. minutus rodents, as well as the common vole Microtus arvalis and harvest mouse Micromys minutus (surveys using the ditch with pitfalls). The common shrew was predominant in the snap-trap counts, accounting for about 45% of the total abundance of all animals recorded. In pine forests with poor productivity and in open spaces, the total abundance of insectivores and rodents is lowest. The species composition of small mammals of the sub-taiga and forest-steppe subzone of the South Trans-Ural region are largely similar (83% of the total species). Specific features of the taiga subzone were determined by the taiga shrew Sorex isodon and Siberian chipmunk Eutamias sibiricus, unusual for the forest-steppe and herb-bunchgrass steppe subzone of the South Trans-Ural region. A characteristic feature of the sub-taiga of the South Trans-Ural region is a specific proportion of the northern red-backed vole Myodes rutilus and European bank vole M. glareolus, their abundance is comparable, or the M. glareolus predominates, which is not observed in the forest-steppe. In the sub-taiga, in the surveys using ditch with pitfalls among insectivores and rodents, the Laxmann's shrew prevailed, its share was approximately one fourth of all recorded animals, although in general the community of small mammals is polydominant, in contrast to the surveys using the trap-line method, where one species dominated – the common shrew. In 2021 (sub-taiga) as well as in 2020 (forest-steppe) the territory of the South TransUral region was characterized by a deep depression of water vole Arvicola amphibius numbers, which was completely absent in the counts.

Unexpected involvement of a second rodent species makes impacts of introduced rats more difficult to detect

Rodent predators are implicated in declines of seabird populations, and removing introduced rats, often, but not always, results in the expected conservation gains. Here we investigated the relationship between small mammal (Norway rat, wood mouse and pygmy shrew) abundance and Manx shearwater breeding success on the island of Rum, Scotland, and tested whether localised rodenticide treatments (to control introduced Norway rats) increased Manx shearwater breeding success. We found that Manx shearwater breeding success was negatively correlated with late summer indices of abundance for rats and mice, but not shrews. On its own, rat activity was a poor predictor of Manx shearwater breeding success. Rat activity increased during the shearwater breeding season in untreated areas but was supressed in areas treated with rodenticides. Levels of mouse (and shrew) activity increased in areas treated with rodenticides (likely in response to lower levels of rat activity) and Manx shearwater breeding success was unchanged in treated areas (p < 0.1). The results suggest that, unexpectedly, negative effects from wood mice can substitute those of Norway rats and that both species contributed to negative impacts on Manx shearwaters. Impacts were intermittent however, and further research is needed to characterise rodent population trends and assess the long-term risks to this seabird colony. The results have implications for conservation practitioners planning rat control programmes on islands where multiple rodent species are present.

Commensals of underground mammals: European mole (Talpa europaea, Eulipotyphla, Talpidae) and the greater mole-rat (Spalax microphthalmus, Rodentia, Spalacidae)

Abstract. Stepanova I, Andreychev A, Kulakhmetov R, Lobachev E. 2021. Commensals of underground mammals: European mole (Talpa europaea, Eulipotyphla, Talpidae) and the greater mole-rat (Spalax microphthalmus, Rodentia, Spalacidae). Biodiversitas 22: 4665-4670. The study of lodgers of burrows of underground mammals was carried out using the method of hunting cylinders (cans). In the study, 29 different representatives from the following classes were identified in the courses of the greater mole-rat and European mole: Diplopoda, Chilopoda, Gastropoda, Insecta, Amphibia, and Mammalia. Among the vertebrates captured are Eurasian common shrew (Sorex araneus), Eurasian pygmy shrew (Sorex minutus), bank vole (Clethrionomys glareolus), common spadefoot toad (Pelobates fuscus), moor frog (Rana arvalis), and common toad (Bufo bufo). Twenty-six different species have been identified among invertebrates. Many animals seek shelter in the burrows of underground mammals from enemies and adverse climatic factors for food or conditions for reproduction. In the central part of Russia, more species of commensals were found in European mole burrows (29) than in greater mole-rat burrows (21).

Relative use of xeric boreal habitats by shrews (Sorexspp.)

AbstractFew studies have explicitly examined habitat use by shrews (Sorexspp.) in the boreal forest of western North America. We conducted pitfall trapping in six common xeric habitat types in Yukon, Canada, to determine their relative use by shrews. The overall capture rate was 0.47 shrews per 100 trap nights (TN), with a total sampling effort of 3652 TN. Cinereus shrews (Sorex cinereus; 0.25 per 100 TN) were the most common species, followed by dusky shrews (Sorex monticolus; 0.14 per 100 TN) and American pygmy shrews (Sorex hoyi; 0.08 per 100 TN). Shrew capture rates and species richness was low in all habitat types sampled. Cinereus shrews were captured in similar numbers in boreal mixedwood forest and alpine shrub habitats, and rarely in other lowland forest habitat types. Dusky shrews were captured largely in alpine shrub habitats, while pygmy shrews were captured only in lowland forest habitat types. The relative use of alpine shrub habitat by cinereus shrews and dusky shrews was not expected. Our data was limited by low captures; however, we provide a first approximation of the relative use of common forest types and subalpine shrub habitat in the boreal forest of northwestern Canada.

Seasonal patterns in habitat use by the harvest mouse (Micromys minutus) and other small mammals

Abstract The ecology of the harvest mouse (Micromys minutus) is poorly understood, partly because it is a difficult species to monitor. It is commonly associated with reedbeds, where evidence suggests that it experiences strong seasonal fluctuations in abundance. However, it is unknown whether these fluctuations are caused by real changes in population size, or by movement between habitats. This study investigated seasonal changes in population size and habitat use by harvest mice, and other small mammal species, by trapping the reedbed and three associated habitat types: woodland, pasture and arable land. A sampling effort of 9887 trap bouts across nine months, resulted in 70 captures of harvest mice, as well as wood mice (N = 1022), bank voles (N = 252), field voles (N = 9), common shrews (N = 86) and pygmy shrews (N = 7). The reedbed was the habitat with the most captures and highest diversity. Harvest mice were caught exclusively in the reedbed at the beginning of autumn. Wood mice and bank voles experienced fluctuations in population numbers and wood mice also showed seasonal variation in habitat use. Our study supports the idea that harvest mice undergo extreme seasonal fluctuations in abundance in reedbeds, but these do not appear to be related to changes in habitat use.

Primer biases in the molecular assessment of diet in multiple insectivorous mammals

Our understanding of trophic interactions of small insectivorous mammals has been drastically improved with the advent of DNA metabarcoding. The technique has continued to be optimised over the years, with primer choice repeatedly being a vital factor for dietary inferences. However, the majority of dietary studies examining the effect of primer choice often rely on in silico analyses or comparing between species that occupy an identical niche type. Here, we apply DNA metabarcoding to empirically compare the prey detection capabilities of two widely used primer sets when assessing the diets of a flying (lesser horseshoe bat; Rhinolophus hipposideros) and two ground-dwelling insectivores (greater white-toothed shrew; Crocidura russula and pygmy shrew; Sorex minutus). Although R. hipposideros primarily rely on two prey orders (Lepidoptera and Diptera), the unique taxa detected by each primer shows that a combination of primers may be the best approach to fully describe bat trophic ecology. However, random forest classifier analysis suggests that one highly degenerate primer set detected the majority of both shrews’ diet despite higher levels of host amplification. The wide range of prey consumed by ground-dwelling insectivores can therefore be accurately documented from using a single broad-range primer set, which can decrease cost and labour. The results presented here show that dietary inferences will differ depending on the primer or primer combination used for insectivores occupying different niches (i.e., hunting in the air or ground) and demonstrate the importance of performing empirical pilot studies for novel study systems.