Pure Subspecies Research Articles

Use of Wing Geometric Morphometric Analysis and mtDNA to Identify Africanization of Apis mellifera in the Central Highlands of Ecuador.

Seventy-five samples were collected from 15 beehives in the central highlands of Ecuador (Tungurahua-Chimborazo) to assess Africanization in managed bee populations using wing geometric morphometric and mitochondrial DNA analyses. The results indicated that when grouping the apiaries based on altitudinal floors into 2600-2800, 2801-3000, and 3001-3274 m above sea level, differences (p < 0.001) were observed. The morphotypes were similar in the first two floors, but the third indicated that altitude plays a crucial role in the differentiation of populations. When comparing with the pure subspecies, we found differences (p < 0.001); the nearest Mahalanobis distance was for Apis mellifera scutellata (D2 = 3.51), with 95.8% Africanization via father in the area. The maternal origin of all patterns belonged to lineage A (A. m. scutellata), with seven haplotypes. The most frequent haplotypes were A26 and A1; however, the A1q haplotype was not detected at the national level or in nearby countries. The identified haplotypes do not coincide with A4, which is predominant in South Africa and Brazil. The results indicate a double origin due to their presence in North Africa and the Iberian Peninsula. The formation of specific morphological groups within ecoregions is suggested.

Geometric Morphometric Analysis of Wing Shape to Identify Populations of Apis mellifera in Camagüey, Cuba.

A total of 45 Apis mellifera colonies were sampled from nine centers for rearing queens in the Camagüey province, Cuba. Wing geometric morphometric analysis was used to determine the ancestry and identify Africanization processes at different altitudes in managed honeybee populations on the island. A total of 350 reference wings were obtained from the pure subspecies: Apis mellifera mellifera, Apis mellifera carnica, Apis mellifera ligustica, Apis mellifera caucasia, Apis mellifera iberiensis, Apis mellifera intermissa, and Apis mellifera scutellata for the study. Our results showed that altitude influences wing shape; and that 96.0% (432) of the individuals were classified as Cuban hybrids, with a tendency to the formation of a new morphotype. In addition, a great similarity was found with the subspecies Apis mellifera mellifera, and it was confirmed that there is no Africanization due to the low presence of 0.44% (2) of this morphotype in the population under study. The greatest Mahalanobis distances were obtained for the comparisons between the center rearing of queens in the Camagüey province with the subspecies A. m. scutellata (D2 = 5.18); A. m. caucasia (D2 = 6.08); A. m. ligustica (D2 = 6.27); and A. m. carnica (D2 = 6.62). The well-defined pattern of wing shape produced by honeybee populations in Camagüey's centers for queen rearing suggests a Cuban hybrid. Moreover, it is essential to note that the populations of bees under investigation lack Africanized morphotypes, indicating that Camagüey bees have not interacted with the African lineage.

Genetic diversity of modern lines of hybrid pigs based on variations in mitochondrial DNA sequence

Genetic diversity of modern lines of hybrid pigs based on variations in mitochondrial DNA sequence

Disrupted Gene Networks in Subfertile Hybrid House Mice.

The Dobzhansky–Muller (DM) model provides a widely accepted mechanism for the evolution of reproductive isolation: incompatible substitutions disrupt interactions between genes. To date, few candidate incompatibility genes have been identified, leaving the genes driving speciation mostly uncharacterized. The importance of interactions in the DM model suggests that gene coexpression networks provide a powerful framework to understand disrupted pathways associated with postzygotic isolation. Here, we perform weighted gene coexpression network analysis to infer gene interactions in hybrids of two recently diverged European house mouse subspecies, Mus mus domesticus and M. m. musculus, which commonly show hybrid male sterility or subfertility. We use genome-wide testis expression data from 467 hybrid mice from two mapping populations: F2s from a laboratory cross between wild-derived pure subspecies strains and offspring of natural hybrids captured in the Central Europe hybrid zone. This large data set enabled us to build a robust consensus network using hybrid males with fertile phenotypes. We identify several expression modules, or groups of coexpressed genes, that are disrupted in subfertile hybrids, including modules functionally enriched for spermatogenesis, cilium and sperm flagellum organization, chromosome organization, and DNA repair, and including genes expressed in spermatogonia, spermatocytes, and spermatids. Our network-based approach enabled us to hone in on specific hub genes likely to be influencing module-wide gene expression and hence potentially driving large-effect DM incompatibilities. A disproportionate number of hub genes lie within sterility loci identified previously in the hybrid zone mapping population and represent promising candidate barrier genes and targets for future functional analysis.

Wing geometric morphometrics and microsatellite analysis provide similar discrimination of honey bee subspecies

Identification of honey bee (Apis mellifera) subspecies is important for their protection. It is also used by queen breeders to maintain some breeding lines. In this study, we compared three methods of subspecies identification based on the following: 17 microsatellite loci, COI-COII mitotypes and geometric morphometrics of forewing venation. The methods were used to classify colonies and workers from a mixed population of A. m. mellifera and A. m. carnica. There was highly significant correlation between results obtained using the three methods. More than three quarters of colonies were classified to the same subspecies by all three methods. The agreement was highest between microsatellites and morphometrics. More than 90 % of colonies were classified to the same subspecies by the two methods. There was also relatively high agreement (75 %) between microsatellites and morphometrics when workers were classified as pure subspecies or hybrids. In particular, one pure subspecies was never misclassified as other pure subspecies. The results presented here show that morphometrics can be used for detection of hybrids between A. m. mellifera and A. m. carnica.

The genetic legacy of multiple beaver reintroductions in Central Europe.

The comeback of the Eurasian beaver (Castor fiber) throughout western and central Europe is considered a major conservation success. Traditionally, several subspecies are recognised by morphology and mitochondrial haplotype, each linked to a relict population. During various reintroduction programs in the 20th century, beavers from multiple source localities were released and now form viable populations. These programs differed in their reintroduction strategies, i.e., using pure subspecies vs. mixed source populations. This inhomogeneity in management actions generated ongoing debates regarding the origin of present beaver populations and appropriate management plans for the future. By sequencing of the mitochondrial control region and microsatellite genotyping of 235 beaver individuals from five selected regions in Germany, Switzerland, Luxembourg, and Belgium we show that beavers from at least four source origins currently form admixed, genetically diverse populations that spread across the study region. While regional occurrences of invasive North American beavers (n = 20) were found, all but one C. fiber bore the mitochondrial haplotype of the autochthonous western Evolutionary Significant Unit (ESU). Considering this, as well as the viability of admixed populations and the fact that the fusion of different lineages is already progressing in all studied regions, we argue that admixture between different beaver source populations should be generally accepted.

REDUCED MALE FERTILITY IS COMMON BUT HIGHLY VARIABLE IN FORM AND SEVERITY IN A NATURAL HOUSE MOUSE HYBRID ZONE

Barriers to gene flow between naturally hybridizing taxa reveal the initial stages of speciation. Reduced hybrid fertility is a common feature of reproductive barriers separating recently diverged species. In house mice (Mus musculus), hybrid male sterility has been studied extensively using experimental crosses between subspecies. Here, we present the first detailed picture of hybrid male fertility in the European M. m. domesticus-M. m. musculus hybrid zone. Complete sterility appears rare or absent in natural hybrids but a large proportion of males (~30%) have sperm count or relative testis weight below the range in pure subspecies, and likely suffer reduced fertility. Comparison of a suite of traits related to fertility among subfertile males indicates reduced hybrid fertility in the contact zone is highly variable among individuals and ancestry groups in the type, number, and severity of spermatogenesis defects present. Taken together, these results suggest multiple underlying genetic incompatibilities are segregating in the hybrid zone, which likely contribute to reproductive isolation between subspecies.

Hybrid zone maintenance by non-adaptive mate choice

In a spatial simulation we show that formation of a stable, narrow hybrid zone requires no selection, only that individuals can recognize their own population type since this is a prerequisite for assortative mating. The European crow occurs in two species/subspecies that meet in a long hybrid zone, the black carrion crow Corvus corone and the grey and black hooded crow C. cornix. In a previous study (Brodin A, Haas F (2006) Anim Behav 72:139) we mimicked sexual imprinting in nestling crows with artificial neural networks, using a learning process that simulates proximate retina perception. The networks were trained on 700 images to recognize either carrion, hooded or hybrid phenotypes as their own. After training the networks were exposed to 300 new, unfamiliar pictures of crows. The networks that had been trained on pure subspecies then showed strong preference for their own type. Networks trained on hybrid crows showed weaker preference for their own type. Assuming that these preferences will determine mate choice preferences we have combined them with empirical data on dispersal of young crows to investigate what kind of geographical distribution pattern this would create. We then assume that the two subspecies meet and hybridize along a straight border. In only 60 generations a stable, narrow hybrid zone that resembles the real hybrid zone was formed. This zone remained stable over time. With minor adjustments of parameters the results would not only fit the width but also the shapes of the clines in the field.

Mosaicism for Sister Chromatid Heterogeneity in Sex Chromosomes from Hybrids of two Subspecies of Chorthippus Parallelus (Orthoptera: Acrididae)

Cytogenetically hybrid forms of the grasshopper subspecies Chorthippus parallelus erythropus (Cpe) and Chorthippus parallelus parallelus (Cpp) occur in a Pyrenean hybrid zone (HZ) ( GOSALVEZ et al. 1988; BELLA et al. 1993; SERRANO 1994). The pure subspecies have the same chromosome complement of 8 pairs of autosomes (3 large submetacentrics, 4 medium acrocentrics, and a single small acrocentric) plus the sex chromosomes (female XX, male XO) (GOSALVEZ et al. 1988). Most of the subspecific chromosomal differentiation occurs on the sex chromosomes (GOSALVEZ et al. 1988). Those of Cpe invariably have a positive pericentromeric Cband (C) and another interstitial band (E). Those of Cpp also always have a pericentromeric C-band, indistinguishable from that of Cpe, but possess a distal band (P) instead of the interstitial E band of Cpe. The P band is closely related to an active nucleolar organiser region (NOR), and so its absence in pure Cpe implies a lack of NOR activity in the sex chromosomes. In situ hybridization shows this to be due to the absence of rDNA genes (SERRANO 1994). A further band, H, localized interstitially between the E and P band locations, has been described in some individuals from hybrid populations in the HZ. All of the 8 possible parental and recombinant patterns of the E, P and H bands have been observed in individuals from hybrid populations ( SERRANO 1994). C-banding patterns of more than 4000 individuals (approximately 1000 pure and 3000 hybrids) have been studied (GOSALVEZ et al. 1988; BELLA et al. 1990, 1992, 1993; RUBIO 1992; FERRIS et al. 1993; SERRANO 1994; BURO et al. 1994; MASON et al., unpubl. data). Two of these individuals, both from hybrid populations, exhibited intra-individual variation of sister-chromatid heterogeneity in the E

Inheritance of body and testis size in the bushcricket Poecilimon veluchianus Ramme (Orthoptera; Tettigoniidae) examined by means of subspecies hybrids

The inheritance of three parameters of body size: body mass, hind femur length and pronotum length, and of three measurements of male fertility: testis mass, relative testis mass (as part of body mass) and sperm number per spermatophore, were examined in crosses between the bushcricket subspecies Poecilimon veluchianus veluchianus and P. v. minor. Body size parameters differed surprisingly in their apparent genetic control: the genes determining pronotum length were autosomal, hind femur length was probably partly X-chromosomal and body mass was largely determined by genes on the X-chromosome. I consider whether sexually selected traits may commonly be sex-linked. Testis mass in the hybrid males was clearly different in reciprocal hybrids and was similar to the father's subspecies in both cases. As a result of the X-chromosomal (maternal) inheritance of body mass and a testis mass similar to the paternal subspecies, the relative testis mass in the hybrid males was larger or smaller than in the pure subspecies. In the male hybrids with reduced testis mass, the mean number of sperm was strongly affected. About 50% of these males transferred only a few sperm per spermatophore.

Inheritance of body and testis size in the bushcricket Poecilimon veluchianus Ramme (Orthoptera; Tettigoniidae) examined by means of subspecies hybrids

The inheritance of three parameters of body size: body mass, hind femur length and pronotum length, and of three measurements of male fertility: testis mass, relative testis mass (as part of body mass) and sperm number per spermatophore, were examined in crosses between the bushcricket subspecies Poecilimon veluchianus veluchianus and P. v. minor. Body size parameters differed surprisingly in their apparent genetic control: the genes determining pronotum length were autosomal, hind femur length was probably partly X-chromosomal and body mass was largely determined by genes on the X-chromosome. I consider whether sexually selected traits may commonly be sex-linked. Testis mass in the hybrid males was clearly different in reciprocal hybrids and was similar to the father's subspecies in both cases. As a result of the X-chromosomal (maternal) inheritance of body mass and a testis mass similar to the paternal subspecies, the relative testis mass in the hybrid males was larger or smaller than in the pure subspecies. In the male hybrids with reduced testis mass, the mean number of sperm was strongly affected. About 50% of these males transferred only a few sperm per spermatophore.

Evidence of hybrid vigor in subspecific hybrids of the saddle-back tamarin (Saguinus fuscicollis).

The effect of hybridization on infant survival was investigated in subspecific crosses of the saddle-back tamarin (Saguinus fuscicollis) at the Oak Ridge Associated Universities (ORAU) Marmoset Research Center (Oak Ridge, TN). Cox Proportional Hazards Regression was used to compare infant survival between (1) pure subspecies, (2) F1, F2, and backcrossed hybrids, and (3) hybrids and their parental subspecies. Also, effects of management changes, sex, and litter size on infant survival were investigated. There were no significant differences in infant survival between the pure subspecies. Also, degree of hybridization (F1, F2, or backcross) did not have a significant effect on infant survival. Progeny of hybrid crosses between S. f. lagonotus and S. f. illigeri was found to have significantly (P < 0.05) higher infant survival than both of their parental subspecies. Individuals born after diet and management changes in the colony had significantly (P < 0.05) higher survival than those born before. There were no significant sex differences in infant survival. Individuals born into triplet litters had significantly (P < 0.05) lower survival than those born into twin litters. These results show heterosis (hybrid vigor) for infant survival in one subspecific S. fuscicollis cross (S. f. lagonotus × S. f. illigeri). The results suggest genetic divergence between the subspecies populations and possible reproductive isolation in the wild. © 1994 Wiley-Liss, Inc.

Genetic Implications of Introducing Florida Largemouth Bass, Micropterus salmoides floridanus

Stocks of northern largemouth bass (NLMB), Micropterus salmoides salmoides, Florida largemouth bass (FLMB), M. s. floridanus, and both reciprocal F1 hybrids were produced through natural spawning; the genetic composition of each stock was confirmed electrophoreticaliy, and experimental populations established. One set of experimental populations (P1 and P2) contained as broodstock equal numbers of adult NLMB and FLMB, whereas the other set (H1 and H2) initially contained equal numbers of adults of both reciprocal F1 hybrids and both pure subspecies. Each year-class produced experimentally were sampled and individuals analyzed genetically to determine their parentage. Initially, much of the YOY production in P1 and P2 was composed of small FLMB that did not survive winter well; once naturally produced F1 hybrids entered the breeding pool, most offspring were Fx hybrids, and the population became heavily introgressed. In H1 and H2 introgression began with the production of the first year-class. Within each year-class NLMB produced in all ponds were significantly larger than all other genotypes, but it appears likely that after only a few generations, production of pure NLMB ceases, all individuals being Fx hybrids. Results illustrate the potential negative impacts of introducing FLMB or hybrids between it and NLMB into waters within or contiguous to the native range of the northern subspecies.

The cytoplasmic 4S translation inhibitory RNA species of chick embryonic muscle: fractionation of biologically active subspecies by high performance liquid chromatography.

A 4S RNA species (iRNA) isolated from chick embryonic muscle which is a potent inhibitor of mRNA translation in vitro shows heterogeneity in the 70-100 nucleotide size range (Sarkar, S., Mukherjee, A.K., and Guha, C. (1981) J. Biol. Chem., 256, 5077-5086). The iRNA was fractionated by HPLC on different size exclusion columns using a variety of elution conditions. Chromatography of iRNA on a TSK 4000 SW column and elution with a low ionic strength buffer gave three components, one of which contained a pure subspecies of about 90-100 nucleotides size, as shown by a single band on PAGE analysis in 99% formamide. The biological activity of this purified subspecies showed that this is a more potent inhibitor of globin mRNA translation than unfractionated iRNA (Sarkar, S., Mukherjee, A.K., and Guha, C., (1981) J. Biol. Chem. 256, 5077-5086). Partial resolution of three additional low molecular weight iRNA subspecies in the 70-80 nucleotide size range in biologically active form was obtained on chromatography of unfractionated iRNA on TSK 4000 SW column in the presence of 0.5 M NaCl or on TSK 3000 SW column in the presence of low salt. The fractionation of iRNA by HPLC appears to be primarily based on size. These results strongly suggest that HPLC may also be useful for the fractionation of a variety of low molecular weight eukaryotic nuclear and cytoplasmic RNAs with retention of biological activity.