Fds are ubiquitous low mo1 wt proteins containing iron sulfur center(s) involved in numerous electron transfer reactions. In plants, one of the major functions of Fd is to provide the reducing power for chloroplastic NADP photoreduction. In addition, Fd is also needed for nitrite, ammonia, and sulfite assimilation as well as for pseudocyclic electron flow and fatty acid metabolism and for the light regulation of chloroplastic enzymes (Orme-Johnson, 1973). This protein is encoded by nuclear genes and is, therefore, produced as a precursor that is subsequently cleaved inside the chloroplast (Smeekens et al., 1985). We have previously purified Chlamydomonas reinhardtii Fd and determined its primary structure by direct amino acid sequencing (Schmitter et al., 1988). Based on this sequence and using the polymerase chain reaction, we have isolated a nucleotidic sequence coding for the mature portion of C. reinhardtii Fd and shown that the deduced amino acid sequence was identical with only one substitution Thr7 to Ser (Table I). In addition, we demonstrated that Escherichia coli cells were able to direct the synthesis of C. reinhardtii Fd polypeptide and to reassemble it together with an iron-sulfur center (Rogers et al., 1992). In this paper we report the sequence of a cDNA encoding C. reinhardtii preferredoxin. A Xgtll cDNA was sequenced (527 bp) and found to encode a 126-amino acid precursor with a molecular mass of 13,250 D, compared to the mature form, which contains 94 amino acids and has a molecular mass of 9,908 D. The deduced amino acid sequence was completely homologous to the sequence reported by Schmitter et al. (1988). In addition, the sequence revealed the structure of the 32-amino acid transit peptide (molecular mass 3342 D), which is as follows: MAMAMRSTFAARVGAKPAVRGARPASRMSCMA. Severa1 lines of evidence indicate that the first ATG is the initiation codon. First, it is preceded by TCA and AAA, triplets theoretically coding for Ser and Lys but rarely if ever used for nuclear genes in C. reinhardtii. Second, the flanking sequence surrounding the initiation codon (AAAAATGGC) fits well the eukaryotic translation initiation consensus (Wedel et al., 1992). Finally, the beginning of the transit peptide (MAMAM) is highly similar to the MAQM sequence reported by Wedel et al. (1992) and to the MAMAT of Hoffmann et al. (1988), and the dipeptide MA is overwhelm-
Read full abstract