This study presents a comprehensive investigation into the performance optimization of a braid-reinforced hollow fiber membrane (BHFM) system for protein separation from milk wastewater. Extensive CFD simulations were conducted to examine the effects of various effective parameters on system performance. The results reveal that at a feed protein concentration of 100 mg/l, the average water flux increases from 149.16 to 453.68 l/m2.h as the inlet feed pressure rises from 100 to 300 kPa. Similarly, for a feed protein concentration of 300 mg/l, the average flux rises from 98.69 to 299.84 l/m2.h. However, higher feed concentrations lead to increased fouling and lower water fluxes. Additionally, an increase in feed pressure results in a decrease in the protein rejection rate, particularly in the initial stages of separation. The study highlights that variations in membrane porosity and thickness significantly affect both protein rejection rate and water flux. Increasing membrane porosity from 0.2 to 0.8 leads to a decrease in protein rejection rate from 94.57 % to 78.47 % at an inlet pressure of 100 kPa, and from 93.33 % to 73.43 % at 300 kPa. Similarly, increasing membrane thickness from 0.1 to 1.0 mm decreases the time-averaged water flux from 105.76 to 8.64 l/m2.h at 100 kPa, and from 321.39 to 25.99 l/m2.h at 300 kPa. However, increasing membrane thickness also increases the protein rejection rate. The study's novelty lies in the quantitative results obtained through CFD simulations, providing valuable insights into BHFM system performance. Future research should focus on exploring innovative braid architectures and material selection to enhance the mechanical stability and durability of braid-reinforced structures under various operational conditions.