The article concerns the problem of capacitor diagnosis in a hybrid aircraft. Capacitors are one of the most commonly damaged components of electrical vehicle drive systems. The result of these failures is an increase in voltage ripple. Most known analytical methods are based on frequency spectrum analysis, which is time-consuming and computationally complex. The use of deep neural networks (DNNs) allows for the direct use of the measurement signal, which reduces the operating time of the overall diagnostic system. However, the problem with these networks is the long training process. Therefore, this article uses transfer learning (TL), which allows for the secondary use of previously learnt DNNs. To collect data to learn the network, a test bench with the ability to simulate a capacitor failure was constructed, and a model based on it was made in the MATLAB/Simulink environment. A convolutional neural network (CNN) structure was developed and trained by the TL method to estimate the capacitance of the capacitor based on signals from the Simulink-designed model. The proposed fault diagnostic method is characterised by a nearly 100% efficiency in determining capacitance, with an operating time of about 10 ms, regardless of load and supply voltage.