Prediction Of Molecular Properties Research Articles

An overview of graph neural networks for molecular biology: Challenges and solutions

This review explores the application of graph neural networks (GNNs) in molecular biology, with a particular focus on their role in drug discovery. Various use cases, including molecule classification for cardiotoxicity detection and the prediction of molecular properties have been examined. A comprehensive analysis compares methodologies, problem statements, datasets, and findings across different studies. A core themes of review is the intuition to regularize a graph neural network which was proven to be reliable in terms of robustness for drug discovery purposes using noise nodes techniques. In the conclusion section, key insights from the reviewed literature and promising future directions for research have been presented. This work aims to provide a foundational understanding and guide future innovations in leveraging GNNs for molecular applications.

GDMol: Generative Double-Masking Self-Supervised Learning for Molecular Property Prediction.

Effective molecular feature representation is crucial for drug property prediction. Recent years have seen increased attention on graph neural networks (GNNs) that are pre-trained using self-supervised learning techniques, aiming to overcome the scarcity of labeled data in molecular property prediction. Traditional GNNs in self-supervised molecular property prediction typically perform a single masking operation on the nodes and edges of the input molecular graph, masking only local information and insufficient for thorough self-supervised training. Hence, we propose a model for molecular property prediction based on generative double-masking self-supervised learning, termed as GDMol. This integrates generative learning into the self-supervised learning framework for latent representation, and applies a second round of masking to these latent representations, enabling the model to better capture global information and semantic knowledge of the molecules for a richer, more informative representation, thereby achieving more accurate and robust molecular property prediction. Our experiments on 5 datasets demonstrated superior performance of GDMol in predicting molecular properties across different domains. Moreover, we used the masking operation to traverse through the gradient changes of each node, the magnitude and sign of which reflect the positive and negative contribution respectively of the local structure in the molecule to the prediction outcome. This in-depth interpretative analysis not only enhances the model's interpretability, but also provides more targeted insights and direction for optimizing drug molecules. In summary, this research offers novel insights on improving molecular property prediction tasks, and paves the way for further research on the application of generative learning and self-supervised learning in the field of chemistry.

Graph neural processes for molecules: an evaluation on docking scores and strategies to improve generalization

Neural processes (NPs) are models for meta-learning which output uncertainty estimates. So far, most studies of NPs have focused on low-dimensional datasets of highly-correlated tasks. While these homogeneous datasets are useful for benchmarking, they may not be representative of realistic transfer learning. In particular, applications in scientific research may prove especially challenging due to the potential novelty of meta-testing tasks. Molecular property prediction is one such research area that is characterized by sparse datasets of many functions on a shared molecular space. In this paper, we study the application of graph NPs to molecular property prediction with DOCKSTRING, a diverse dataset of docking scores. Graph NPs show competitive performance in few-shot learning tasks relative to supervised learning baselines common in chemoinformatics, as well as alternative techniques for transfer learning and meta-learning. In order to increase meta-generalization to divergent test functions, we propose fine-tuning strategies that adapt the parameters of NPs. We find that adaptation can substantially increase NPs' regression performance while maintaining good calibration of uncertainty estimates. Finally, we present a Bayesian optimization experiment which showcases the potential advantages of NPs over Gaussian processes in iterative screening. Overall, our results suggest that NPs on molecular graphs hold great potential for molecular property prediction in the low-data setting.Scientific contributionNeural processes are a family of meta-learning algorithms which deal with data scarcity by transferring information across tasks and making probabilistic predictions. We evaluate their performance on regression and optimization molecular tasks using docking scores, finding them to outperform classical single-task and transfer-learning models. We examine the issue of generalization to divergent test tasks, which is a general concern of meta-learning algorithms in science, and propose strategies to alleviate it.

Optimizing GNN Architectures Through Nonlinear Activation Functions for Potent Molecular Property Prediction

Accurate predictions of molecular properties are crucial for advancements in drug discovery and materials science. However, this task is complex and requires effective representations of molecular structures. Recently, Graph Neural Networks (GNNs) have emerged as powerful tools for this purpose, demonstrating significant potential in modeling molecular data. Despite advancements in GNN predictive performance, existing methods lack clarity on how architectural choices, particularly activation functions, affect training dynamics and inference stages in interpreting the predicted results. To address this gap, this paper introduces a novel activation function called the Sine Linear Unit (SLU), aimed at enhancing the predictive capabilities of GNNs in the context of molecular property prediction. To demonstrate the effectiveness of SLU within GNN architecture, we conduct experiments on diverse molecular datasets encompassing various regression and classification tasks. Our findings indicate that SLU consistently outperforms traditional activation functions on hydration free energy (FreeSolv), inhibitory binding of human β secretase (BACE), and blood brain barrier penetration (BBBP), achieving the superior performance in each task, with one exception on the GCN model using the QM9 data set. These results underscore SLU’s potential to significantly improve prediction accuracy, making it a valuable addition to the field of molecular modeling.

AI-Guided Design of MALDI Matrices: Exploring the Electron Transfer Chemical Space for Mass Spectrometric Analysis of Low-Molecular-Weight Compounds.

The development of matrices for Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry (MALDI MS) has traditionally relied on experimental efforts. Here, we propose a Goal-Directed artificial intelligence generative model, fueled by computational chemistry calculated data, to construct a chemical space optimized for Electron Transfer (ET) processes in MALDI analysis. We utilized a group of 30 reported ET matrices, subjected to structural enumeration and molecular properties prediction using semiempirical and ab initio calculations, to establish a comprehensive database comprising diverse structural and property data. Subsequently, employing a protocol of structural enumeration with 68 canonical SMILES of Bemis-Murcko (BM) fragments, we expanded the structural complexity of the initial library. This process generated 82753 compounds organized into 10 scaffold levels, with a p50 index from the Cyclic System Retrieval (CSR) curve of scaffolds of 50%. From the resulting enumerated library, a diverse subset of structures was selected by using the Jarvis-Patrick clustering method. These structures, along with their associated properties measured from quantum mechanics and experimental data, were used to train a Machine Learning (ML) model to predict ionization energy (Ei) values. Subsequently, a Scoring Neural Network (SNN), coupled with our Goal-Directed generative model using a Recurrent Neural Network (RNN) with Deep Learning (DL) architectures, was trained. The generative model was guided using a prior network within a Reinforcement/Transfer Learning environment. The final AI-generative model learned that structures with high unsaturation, H/C ratios under 1, and molecular weights between 100 and 300 u are favorable for ET MALDI matrices, as well as those with few aromatic rings and zero aliphatic rings. Other molecular features were also favored. The resulting AI-generated library exhibits Ei values over 8.0 eV, akin to those of reported "good" ET MALDI matrices, indicating successful design with high synthesis accessibility scores. In conclusion, our generative model provided valuable insights into the molecular features ideal for ET MALDI compounds while generating a wide range of structurally diverse molecules within a similar molecular property space. The next critical step in this process is to synthesize a selection of these generated compounds for the experimental validation and further characterization.

A Knowledge–Data Dual‐Driven Framework for Predicting the Molecular Properties of Rechargeable Battery Electrolytes

Developing rechargeable batteries that operate within a wide temperature range and possess high safety has become necessary with increasing demands. Rapid and accurate assessment of the melting points (MPs), boiling points (BPs), and flash points (FPs) of electrolyte molecules is essential for expediting battery development. Herein, we introduce Knowledge‐based electrolyte Property prediction Integration (KPI), a knowledge–data dual‐driven framework for molecular property prediction of electrolytes. Initially, the KPI collects molecular structures and properties, and then automatically organizes them into structured datasets. Subsequently, interpretable machine learning further explores the structure–property relationships of molecules from a microscopic perspective. Finally, by embedding the discovered knowledge into property prediction models, the KPI achieved very low mean absolute errors of 10.4, 4.6, and 4.8 K for MP, BP, and FP predictions, respectively. The KPI reached state‐of‐the‐art results in 18 out of 20 datasets. Utilizing molecular neighbor search and high‐throughput screening, 15 and 14 promising molecules, with and without Chemical Abstracts Service Registry Number, respectively, were predicted for wide‐temperature‐range and high‐safety batteries. The KPI not only accurately predicts molecular properties and deepens the understanding of structure–property relationships but also serves as an efficient framework for integrating artificial intelligence and domain knowledge.

Chain-aware graph neural networks for molecular property prediction.

Predicting the properties of molecules is a fundamental problem in drug design and discovery, while how to learn effective feature representations lies at the core of modern deep-learning-based prediction methods. Recent progress shows expressive power of graph neural networks (GNNs) in capturing structural information for molecular graphs. However, we find that most molecular graphs exhibit low clustering along with dominating chains. Such topological characteristics can induce feature squashing during message passing and thus impair the expressivity of conventional GNNs. Aiming at improving node features' expressiveness, we develop a novel chain-aware graph neural network model, wherein the chain structures are captured by learning the representation of the center node along the shortest paths starting from it, and the redundancy between layers are mitigated via initial residual difference connection (IRDC). Then the molecular graph is represented by attentive pooling of all node representations. Compared to standard graph convolution, our chain-aware learning scheme offers a more straightforward feature interaction between distant nodes, thus it is able to capture the information about long-range dependency. We provide extensive empirical analysis on real-world datasets to show the outperformance of the proposed method. The MolPath code is publicly available at https://github.com/Assassinswhh/Molpath.

A Knowledge-Data Dual-Driven Framework for Predicting the Molecular Properties of Rechargeable Battery Electrolytes.

Developing rechargeable batteries that operate within a wide temperature range and possess high safety has become necessary with increasing demands. Rapid and accurate assessment of the melting points (MPs), boiling points (BPs), and flash points (FPs) of electrolyte molecules is essential for expediting battery development. Herein, we introduce Knowledge-based electrolyte Property prediction Integration (KPI), a knowledge-data dual-driven framework for molecular property prediction of electrolytes. Initially, the KPI collects molecular structures and properties, and then automatically organizes them into structured datasets. Subsequently, interpretable machine learning further explores the structure-property relationships of molecules from a microscopic perspective. Finally, by embedding the discovered knowledge into property prediction models, the KPI achieved very low mean absolute errors of 10.4, 4.6, and 4.8 K for MP, BP, and FP predictions, respectively. The KPI reached state-of-the-art results in 18 out of 20 datasets. Utilizing molecular neighbor search and high-throughput screening, 15 and 14 promising molecules, with and without Chemical Abstracts Service Registry Number, respectively, were predicted for wide-temperature-range and high-safety batteries. The KPI not only accurately predicts molecular properties and deepens the understanding of structure-property relationships but also serves as an efficient framework for integrating artificial intelligence and domain knowledge.

Graph Neural Network-Based Molecular Property Prediction with Patch Aggregation.

Graph neural networks (GNNs) have emerged as powerful tools for quantum chemical property prediction, leveraging the inherent graph structure of molecular systems. GNNs depend on an edge-to-node aggregation mechanism for combining edge representations into node representations. Unfortunately, existing learnable edge-to-node aggregation methods substantially increase the number of parameters and, thus, the computational cost relative to simple sum aggregation. Worse, as we report here, they often fail to improve predictive accuracy. We therefore propose a novel learnable edge-to-node aggregation mechanism that aims to improve the accuracy and parameter efficiency of GNNs in predicting molecular properties. The new mechanism, called "patch aggregation", is inspired by the Multi-Head Attention and Mixture of Experts machine learning techniques. We have incorporated the patch aggregation method into the specialized, state-of-the-art GNN models SchNet, DimeNet++, SphereNet, TensorNet, and VisNet and show that patch aggregation consistently outperforms existing learnable and nonlearnable aggregation techniques (sum, multilayer perceptron, softmax, and set transformer aggregation) in the prediction of molecular properties such as QM9 thermodynamic properties and MD17 molecular dynamics trajectory energies and forces. We also find that patch aggregation not only improves prediction accuracy but also is parameter-efficient, making it an attractive option for practical applications for which computational resources are limited. Further, we show that Patch aggregation can be applied across different GNN models. Overall, Patch aggregation is a powerful edge-to-node aggregation mechanism that improves the accuracy of molecular property predictions by GNNs.

Transfer learning for molecular property predictions from small datasets

Machine learning has emerged as a new tool in chemistry to bypass expensive experiments or quantum-chemical calculations, for example, in high-throughput screening applications. However, many machine learning studies rely on small datasets, making it difficult to efficiently implement powerful deep learning architectures such as message passing neural networks. In this study, we benchmark common machine learning models for the prediction of molecular properties on two small datasets, for which the best results are obtained with the message passing neural network PaiNN as well as SOAP molecular descriptors concatenated to a set of simple molecular descriptors tailored to gradient boosting with regression trees. To further improve the predictive capabilities of PaiNN, we present a transfer learning strategy that uses large datasets to pre-train the respective models and allows us to obtain more accurate models after fine-tuning on the original datasets. The pre-training labels are obtained from computationally cheap ab initio or semi-empirical models, and both datasets are normalized to mean zero and standard deviation one to align the labels’ distributions. This study covers two small chemistry datasets, the Harvard Organic Photovoltaics dataset (HOPV, HOMO–LUMO-gaps), for which excellent results are obtained, and the FreeSolv dataset (solvation energies), where this method is less successful, probably due to a complex underlying learning task and the dissimilar methods used to obtain pre-training and fine-tuning labels. Finally, we find that for the HOPV dataset, the final training results do not improve monotonically with the size of the pre-training dataset, but pre-training with fewer data points can lead to more biased pre-trained models and higher accuracy after fine-tuning.

Evaluating deep neural networks in optimizing drug discovery and precision medicine: A review

Introduction/Background: Deep neural networks have shown great promise in advancing drug discovery and precision medicine. By leveraging large amounts of complex biomedical and chemical data, deep learning approaches can identify novel targets, predict drug-target and drug-drug interactions, generate new molecular structures, and assist in personalized treatment selection and development. However, fully utilizing deep learning techniques for optimization across the drug development pipeline remains an ongoing challenge. Materials and Methods: A comprehensive literature review was conducted using major bibliographic databases including PubMed, Web of Science, and Scopus. Search terms included combinations of "deep learning", "drug discovery", "precision medicine", "biomedical data", and "neural networks". Over 200 papers published between 2010-2023 related to deep learning applications in pharmacology and genomics were identified and reviewed. Results: Deep learning has been widely applied at various stages of the drug discovery process including target identification/prioritization, lead generation/optimization, and prediction of molecular properties. Convolutional neural networks are commonly used for the representation and classification of biological sequence and image data for tasks such as gene expression analysis and pathogen detection from microscopy images. Graph neural networks effectively model compound structures and interactome networks to predict molecular bindings and disease associations. Multi-modal neural networks integrate diverse data types for personalized treatment response prediction and biomarker discovery. Challenges remain around data and model interpretation, generalization to new targets/diseases, and integration across domains. Discussion: While deep learning has shown promise, rigorous benchmarking and validation on real-world clinical endpoints are still needed to establish usefulness in decision-making. Data and model transparency must be improved to enable scientific insights. Privacy and security risks accompanying "real world" biomedical big data will require ethical practices. Standardization and sharing of resources/protocols could accelerate progress by enabling comparison of techniques. Combining deep learning with other AI paradigms like causal inference may further improve utility in drug discovery and precision healthcare. Conclusion: Deep neural networks demonstrate potential for optimizing drug development and precision medicine applications. Continued advancement relies on addressing challenges around data, models, validation, and ethics. Multi-disciplinary collaborations integrating machine learning, molecular biology, medicine, and other domains are needed to fully realize benefits to patients.

KnoMol: A Knowledge-Enhanced Graph Transformer for Molecular Property Prediction.

Molecular property prediction (MPP) techniques are pivotal in reducing drug development costs by preemptively predicting bioactivity and ADMET properties. Despite the application of numerous deep learning approaches, enhancing the representational capacity of these models remains a significant challenge. This paper presents a novel knowledge-based Transformer framework, KnoMol, designed to improve the understanding of molecular structures. KnoMol integrates expert chemical knowledge into the Transformer, emulating the analytical methods of medicinal chemists. Additionally, the multiperspective attention mechanism provides a more precise way to represent ring systems. In the evaluation experiments, KnoMol achieved state-of-the-art performance on both MoleculeNet and small-scale data sets, surpassing existing models in terms of accuracy and generalization. Further research indicated that the incorporation of knowledge significantly reduces KnoMol's reliance on data volumes, offering a solution to the challenge of data scarcity. Moreover, KnoMol identified several new inhibitors of HER2 in a case study, demonstrating its value in real-world applications. Overall, this research not only provides a powerful tool for MPP but also serves as a successful precedent for embedding knowledge into Transformers, with positive implications for computer-aided drug discovery and the development of MPP algorithms.

Prototype-based contrastive substructure identification for molecular property prediction.

Substructure-based representation learning has emerged as a powerful approach to featurize complex attributed graphs, with promising results in molecular property prediction (MPP). However, existing MPP methods mainly rely on manually defined rules to extract substructures. It remains an open challenge to adaptively identify meaningful substructures from numerous molecular graphs to accommodate MPP tasks. To this end, this paper proposes Prototype-based cOntrastive Substructure IdentificaTion (POSIT), a self-supervised framework to autonomously discover substructural prototypes across graphs so as to guide end-to-end molecular fragmentation. During pre-training, POSIT emphasizes two key aspects of substructure identification: firstly, it imposes a soft connectivity constraint to encourage the generation of topologically meaningful substructures; secondly, it aligns resultant substructures with derived prototypes through a prototype-substructure contrastive clustering objective, ensuring attribute-based similarity within clusters. In the fine-tuning stage, a cross-scale attention mechanism is designed to integrate substructure-level information to enhance molecular representations. The effectiveness of the POSIT framework is demonstrated by experimental results from diverse real-world datasets, covering both classification and regression tasks. Moreover, visualization analysis validates the consistency of chemical priors with identified substructures. The source code is publicly available at https://github.com/VRPharmer/POSIT.

DGCL: dual-graph neural networks contrastive learning for molecular property prediction.

In this paper, we propose DGCL, a dual-graph neural networks (GNNs)-based contrastive learning (CL) integrated with mixed molecular fingerprints (MFPs) for molecular property prediction. The DGCL-MFP method contains two stages. In the first pretraining stage, we utilize two different GNNs as encoders to construct CL, rather than using the method of generating enhanced graphs as before. Precisely, DGCL aggregates and enhances features of the same molecule by the Graph Isomorphism Network and the Graph Attention Network, with representations extracted from the same molecule serving as positive samples, and others marked as negative ones. In the downstream tasks training stage, features extracted from the two above pretrained graph networks and the meticulously selected MFPs are concated together to predict molecular properties. Our experiments show that DGCL enhances the performance of existing GNNs by achieving or surpassing the state-of-the-art self-supervised learning models on multiple benchmark datasets. Specifically, DGCL increases the average performance of classification tasks by 3.73$\%$ and improves the performance of regression task Lipo by 0.126. Through ablation studies, we validate the impact of network fusion strategies and MFPs on model performance. In addition, DGCL's predictive performance is further enhanced by weighting different molecular features based on the Extended Connectivity Fingerprint. The code and datasets of DGCL will be made publicly available.

Pre-training with fractional denoising to enhance molecular property prediction

Pre-training with fractional denoising to enhance molecular property prediction

Chemical reaction enhanced graph learning for molecule representation.

Molecular representation learning (MRL) models molecules with low-dimensional vectors to support biological and chemical applications. Current methods primarily rely on intrinsic molecular information to learn molecular representations, but they often overlook effectively integrating domain knowledge into MRL. In this article, we develop a reaction-enhanced graph learning (RXGL) framework for MRL, utilizing chemical reactions as domain knowledge. RXGL introduces dual graph learning modules to model molecule representation. One module employs graph convolutions on molecular graphs to capture molecule structures. The other module constructs a reaction-aware graph from chemical reactions and designs a novel graph attention network on this graph to integrate reaction-level relations into molecular modeling. To refine molecule representations, we design a reaction-based relation learning task, which considers the relations between the reactant and product sides in reactions. In addition, we introduce a cross-view contrastive task to strengthen the cooperative associations between molecular and reaction-aware graph learning. Experiment results show that our RXGL achieves strong performance in various downstream tasks, including product prediction, reaction classification, and molecular property prediction. The code is publicly available at https://github.com/coder-ACAC/RLM.

SGNN-T: Space graph neural network coupled transformer for molecular property prediction

Molecular properties play a crucial role in material discovery, protein interaction and drug development. The appearance of Graph Neural Network (GNN) significantly improved the performance of molecular property prediction. However, nodes in GNN only update the features of neighbor nodes, resulting in insufficient ability to encode global feature information. The self- attention mechanism in transformer can encode the global information except for local information of molecules, while its spatial information is insufficient. Since molecules are three-dimensional spatial structures, spatial geometry information is an important attribute for molecules properties. To consider these factors, a network model of Space Graph Neural Network coupled Transformer (SGNN-T) is proposed in this paper which can combine global and local molecule information with three-dimensional spatial structures for molecular properties prediction. In this model, Graph neural network Geometric Feature Fusion Module (GGFF) and Transformer Spatial Geometric Feature Enhancement Module (TSGFE) are included to enhance the spatial geometry learning ability of the network. The GGFF module constructs a parallel graph neural network by thinking over atoms, bonds and bond angles at the same time which effectively complements the spatial information of the network by leading into bond angles than normal GNN. The TSGFE module introduces the coordinates and centrality degree features coupled with the features by GGFF into transformer to further enhance the geometric expression ability of the module. Through these two parts, SGNN-T model can encode local and global information of molecules at the same time. Property prediction experiments are executed on the QM9, OMDB and MEGNet dataset. The results of MAE show the proposed model has the best performance than the popular models.

ResGAT: Residual Graph Attention Networks for molecular property prediction

Molecular property prediction is an important step in the drug discovery pipeline. Numerous computational methods have been developed to predict a wide range of molecular properties. While recent approaches have shown promising results, no single architecture can comprehensively address all tasks, making this area persistently challenging and requiring substantial time and effort. Beyond traditional machine learning and deep learning architectures for regular data, several deep learning architectures have been designed for graph-structured data to overcome the limitations of conventional methods. Utilizing graph-structured data in quantitative structure–activity relationship (QSAR) modeling allows models to effectively extract unique features, especially where connectivity information is crucial. In our study, we developed residual graph attention networks (ResGAT), a deep learning architecture for molecular graph-structured data. This architecture is a combination of graph attention networks and shortcut connections to address both regression and classification problems. It is also customizable to adapt to various dataset sizes, enhancing the learning process based on molecular patterns. When tested multiple times with both random and scaffold sampling strategies on nine benchmark molecular datasets, QSAR models developed using ResGAT demonstrated stability and competitive performance compared to state-of-the-art methods.

MolMVC: Enhancing molecular representations for drug-related tasks through multi-view contrastive learning.

Effective molecular representation is critical in drug development. The complex nature of molecules demands comprehensive multi-view representations, considering 1D, 2D, and 3D aspects, to capture diverse perspectives. Obtaining representations that encompass these varied structures is crucial for a holistic understanding of molecules in drug-related contexts. In this study, we introduce an innovative multi-view contrastive learning framework for molecular representation, denoted as MolMVC. Initially, we use a Transformer encoder to capture 1D sequence information and a Graph Transformer to encode the intricate 2D and 3D structural details of molecules. Our approach incorporates a novel attention-guided augmentation scheme, leveraging prior knowledge to create positive samples tailored to different molecular data views. To align multi-view molecular positive samples effectively in latent space, we introduce an adaptive multi-view contrastive loss (AMCLoss). In particular, we calculate AMCLoss at various levels within the model to effectively capture the hierarchical nature of the molecular information. Eventually, we pre-train the encoders via minimizing AMCLoss to obtain the molecular representation, which can be used for various down-stream tasks. In our experiments, we evaluate the performance of our MolMVC on multiple tasks, including molecular property prediction (MPP), drug-target binding affinity (DTA) prediction and cancer drug response (CDR) prediction. The results demonstrate that the molecular representation learned by our MolMVC can enhance the predictive accuracy on these tasks and also reduce the computational costs. Furthermore, we showcase MolMVC's efficacy in drug repositioning across a spectrum of drug-related applications. The code and pre-trained model are publicly available at https://github.com/Hhhzj-7/MolMVC.

Factorized Quadruples and a Predictor of Higher-Level Correlation in Thermochemistry.

Coupled cluster theory has had a momentous impact on the ab initio prediction of molecular properties, and remains a staple ingratiate in high-accuracy thermochemical model chemistries. However, these methods require inclusion of at least some connected quadruple excitations, which generally scale at best as with the number of basis functions. It is very difficult to predict, a priori, the effect correlation of past CCSD(T) on a given reaction energy. The purpose of this work is to examine cost-effective quadruple corrections based on the factorization theorem of the many-body perturbation theory that may address these challenges. We show that the factorized CCSD(TQf) method introduces minimal error to predicted correlation and reaction energies as compared to the CCSD(TQ). Further, we examine the performance of Goodson's continued fraction method in the estimation of CCSDT(Q)Λ contributions to reaction energies as well as a "new" method related to %TAE[(T)] that we refer to as a scaled perturbation estimator. We find that the scaled perturbation estimator based upon CCSD(TQf)/cc-pVDZ is capable of predicting CCSDT(Q)Λ/cc-pVDZ contributions to reaction energies with an average error of 0.07 kcal mol-1 and an L2D of 0.52 kcal mol-1 when applied to a test-suite of nearly 3000 reactions. This offers a means by which to reliably "ballpark" how important post-CCSD(T) contributions are to reaction energies while incurring no more than CCSD(T) formal cost and a little mental math.