Lei bamboo shoots are extensively used in the food processing industry, producing solid waste such as bamboo shoot shells and liquid wastewater. This study analyzed several sewage indicators, revealing that the majority exceed the national standards of China for direct water discharge. A field experiment was conducted over a period of 4 months to evaluate the effects of different treatments during the natural decomposition of bamboo shoot shells.The treatment groups consisted of the boiled experimental group (EG) and the control group (CG). Results showed that in EG, the methane emission increased by 8.6% (P < 0.05), the carbon dioxide emission increased significantly by 19.7% (P < 0.01), and the nitrous oxide emission decreased by 37.9% (P < 0.01) relative to those in CG. Regression analysis was employed to establish a relationship model between CH4, CO2, and N2O emission fluxes and temperature and humidity in the EG and CG groups. A specific functional relationship was identified between CH4 and CO2 emission fluxes and temperature and humidity, but N2O emission was present. No significant correlation was found between flux and ambient temperature and humidity (R2 < 0.3). We also estimated that the carbon dioxide emissions and water consumption of producing 1 kg of canned bamboo shoots were 2.8669 kg and 86.8 L, covering the processes in the life cycle of bamboo shoot products. This study identifies the potential water pollution problems and provides insights into resource utilization and recycling in bamboo shoot food processing, facilitating the realization of clean production processes. It also sheds light on the water footprint of bamboo shoot products throughout their life cycle, and the carbon footprint research provides valuable references.