Noctis Labyrinthus has been a region of disputed origin due to its complexity and poor understanding of how various processes and mechanisms may have combined to form it. The surface is an integrated record of intensive tectonic activity expressed by a multiple extended sets of dip-slip faults oriented in different directions, and thought to have acted on this region over its history. These faults are always coalescent to pits and pit chains displaying a complicated geological history in the region. To understand this geological history, we mapped the surface features in Noctis Labyrinthus using the High-Resolution Stereo Camera (HRSC) onboard Mars Express ND2 nadir channel basemaps, and we adapted the Digital Terrain Map (DTM) from the Mission Experiment Gridded Data Record (MEGDR) of Mars Orbiter Laser Altimeter (MOLA) onboard Mars Global Surveyor (MGS) for the topography. We have investigated the spatial distribution and trend of fault systems, the pit chains' morphology, and the correlation between these two types of features. Our results show three fault systems: i) NS and NNE-SSW, ii) EW and ENE-WSW, and iii) NNW-SSE and NW. The analysis of the faults trending, cross-cutting correlation and the superimposition led to identify multiple intersections between these faults that have been alongside with the reactivations of some inherited faults. We interpreted the first system of fault to be related to coeval lateral extension, generated by regional stress tensor, which is probably related to the slight bending of Valles Marineris within two phases of bidirectional extension. The second system of faults has been generated by the radial oblate stress tensor related to the formation of the small shield volcanoes in Syria Planum. However, the third system is likely related to the external driving process, probably in the Tharsis province. We classified pits in four evolutionary stages based on their morphometric attributes. We believe that the formation of the pit chains in Noctis Labyrinthus is related to a surface collapse after a pressure drop related to the magma chamber deflation associated with Syria Planum volcanic province. We propose a deformational model based on early extension and magmatic plumbing as driving processes for the formation of Noctis Labyrinthus.