Phosphorus Cycling Research Articles

Extreme soil salinity reduces N and P metabolism and related microbial network complexity and community immigration rate.

Soil microbiomes are well known to suffer from the effects of rising salinity. There are, however, no current understandings regarding its specific effects on microbial metabolic functions associated with nitrogen (N) and phosphorus (P) cycling, particularly in the Yellow River Delta (YRD), one of the largest estuaries in the world. This research examined soil microbiomes at 50 sites in the YRD region to analyze their co-occurrence networks and their relationship with N (nitrification, denitrification, dissimilatory, assimilatory, fixation, and mineralization) and P (solubilization, mineralization, transportation, and regulation) metabolism processes. Our findings indicate a notable reduction in soil multifunctionality as salinity levels increase, with Halofilum-ochraceum playing a significant role in nitrification, whereas Bacteroidetes-SB0662-bin-6 helps solubilize inorganic P in highly saline areas. High soil salinity negatively affected the amoA gene involved in nitrification and increased the nosZ gene involved in denitrification in extreme salinity soil with 8.2g/kg salt content. Extreme salinity significantly reduced the expression of genes involved in inorganic P solubilization, such as ppa and ppx. Additionally, the alkaline P gene phoD exhibited significant decreases in extremely saline soils, thereby impeding the mineralization of organic P. The neutral community models indicated that microbial community immigration rate showed a linear negative relationship with soil EC in the six N and four P processes. Salinization, however, displayed a nonlinear pattern with clearly defined thresholds on the community of microbes involved in N and P cycling. Reduced microbial diversity and interactions are causing a decline in soil multifunctionality, and the soil multifunctionality and network edges jointly limited the microbial community immigration rate involved in N and P cycling. It is crucial to preserve soil microbial functions to support nutrient cycling and predict the ecological effects of soil salinization.

The microbial phosphorus cycle in aquatic ecosystems.

Phosphorus is an essential element for life, and phosphorus cycling is crucial to planetary habitability. In aquatic environments, microorganisms are a major component of phosphorus cycling and rapidly transform the diverse chemical forms of phosphorus through various uptake, assimilation and release pathways. Recent discoveries have revealed a more dynamic and complex aquatic microbial phosphorus cycle than previously understood. Some microorganisms have been shown to use and produce new phosphorus compounds, including those in reduced forms. New findings have also raised numerous unanswered questions that warrant further investigation. There is an expanding influence of human activity on aquatic ecosystems. Advancements in understanding the phosphorus biogeochemistry of evolving aquatic environments offer a unique opportunity to comprehend, anticipate and mitigate the effect of human activities. In this Review, I discuss the wealth of new aquatic phosphorus cycle research, spanning disciplines from omics and physiology to global biogeochemical modelling, with a focus on the current comprehension of how aquatic microorganisms sense, transport, assimilate, store, produce and release phosphorus. Of note, I delve into cellular phosphorus allocation, an underexplored topic with wide-ranging implications for energy and element flux in aquatic ecosystems.

Soil metagenomics reveals reduced tillage improves soil functional profiles of carbon, nitrogen, and phosphorus cycling in bulk and rhizosphere soils

Conservation tillage practices (CAT) are known to benefit soil health and soil ecosystem functions relative to conventional tillage (CVT); however, much uncertainty remains concerning microbial functional traits and their subsequent effects on soil nutrients under different tillage practices. We analyzed the functional profiles of the C, N, and P cycles in response to CAT of no-tillage (NT), reduced tillage (RT), and CVT of moldboard plowing (MP) in bulk and rhizosphere soils using shotgun sequencing. CAT induced distinct microbial functional patterns relative to CVT, and these differences were generally more evident in rhizosphere soils than in bulk soils. CAT promotes multiple metabolic pathways such as C and N decomposition, fermentation, CO oxidation, N fixation, nitrate reduction and inorganic-P and organic-P transformations in bulk and/or rhizosphere soils. Variations in these metabolic pathways were mainly driven by Bradyrhizobium, Mesorhizobium, Nitrososphaera, Phenylobacterium, Rhizobium which are affiliated with Proteobacteria, Actinobacteria, Acidobacteria, Bacteroidota and Thaumarchaeota. Furthermore, 24 high-quality metagenome-assembled genomes (MAGs) were reconstructed, of which three novel MAGs (TL100, TL46, and TL57) harbored functional genes regulating all metabolic pathways. In particular, NT-enriched MAGs (such as Sphingomonas) promote fermentation, resulting in the reduction of soil total carbon (TC) relative to MP in bulk soils. RT retained the contents of soil TC and total nitrogen (TN) well and up-regulated the phoR gene carried by Streptomyces, which promoted the regulation of P-starvation concomitantly with the increase in the contents of total phosphorous (TP) and available phosphorous (AP) in bulk soil. Additionally, assimilatory nitrate reduction coupled with organic-P mineralization was facilitated by CAT in rhizosphere soil, leading to the mitigation of N loss and the activation of soil organic-P for crop uptake. Overall, our results revealed that CAT significantly accelerated multiple metabolic potentials, and RT could sustain soil nutrient contents better than NT.

Metabolic abnormalities and reprogramming in cats with naturally occurring hypertrophic cardiomyopathy.

The heart is a metabolic organ rich in mitochondria. The failing heart reprograms to utilize different energy substrates, which increase its oxygen consumption. These adaptive changes contribute to increased oxidative stress. Hypertrophic cardiomyopathy (HCM) is a common heart condition, affecting approximately 15% of the general cat population. Feline HCM shares phenotypical and genotypical similarities with human HCM, but the disease mechanisms for both species are incompletely understood. Our goal was to characterize global changes in metabolome between healthy control cats and cats with different stages of HCM. Serum samples from 83 cats, the majority (70/83) of which were domestic shorthair and included 23 healthy control cats, 31 and 12 preclinical cats with American College of Veterinary Internal Medicine (ACVIM) stages B1 and B2, respectively, and 17 cats with history of clinical heart failure or arterial thromboembolism (ACVIM stage C), were collected for untargeted metabolomic analysis. Multiple linear regression adjusted for age, sex and body weight was applied to compare between control and across HCM groups. Our study identified 1253 metabolites, of which 983 metabolites had known identities. Statistical analysis identified 167 metabolites that were significantly different among groups (adjusted P<0.1). About half of the differentially identified metabolites were lipids, including glycerophospholipids, sphingolipids and cholesterol. Serum concentrations of free fatty acids, 3-hydroxy fatty acids and acylcarnitines were increased in HCM groups compared with control group. The levels of creatine phosphate and multiple Krebs cycle intermediates, including succinate, aconitate and α-ketoglutarate, also accumulated in the circulation of HCM cats. In addition, serum levels of nicotinamide and tryptophan, precursors for de novo NAD+ biosynthesis, were reduced in HCM groups versus control group. Glutathione metabolism was altered. Serum levels of cystine, the oxidized form of cysteine and cysteine-glutathione disulfide, were elevated in the HCM groups, indicative of heightened oxidative stress. Further, the level of ophthalmate, an endogenous glutathione analog and competitive inhibitor, was increased by more than twofold in HCM groups versus control group. Finally, several uremic toxins, including guanidino compounds and protein bound putrescine, accumulated in the circulation of HCM cats. Our study provided evidence of deranged energy metabolism, altered glutathione homeostasis and impaired renal uremic toxin excretion. Altered lipid metabolism suggested perturbed structure and function of cardiac sarcolemma membrane and lipid signalling.

Variations of phosphorus in sediments and suspended particulate matter of a typical mesotrophic plateau lake and their contribution to eutrophication

Internal phosphorus loading (IPL), as an important part of lake phosphorus cycle and the key to solve the eutrophication problem, is still an important cause of regional and seasonal algal blooms for some mesotrophic lakes located in plateau areas. We investigated the composition, distribution of P fractions in sediments and suspended particulate matter (SPM) of Erhai Lake, southwest China, and explored the relationships between environmental variables and spatial-temporal variations of P fractions. The total P (TP) in surface sediments ranged from 817 to 1216 mg/kg, with inert Ca-P (32%) and Res-P (24%) predominating, at a moderate level. The comparison of short-term release fluxes (0.08 mg/(m2·d)) and long-term release fluxes (0.09 mg/(m2·d)) reflected that the northern region was recovering slowly from the previous P pollution. Mobile-P (the sum of loosely adsorbed P, iron bound P, and organic P) accounted for 52.3% of the TP in SPM and showed high spatial-temporal variations, which were closely related to the growth of algae throughout the investigation. The results suggested that sediments could make a sustained contribution to IPL, and that the P in SPM was highly active and significantly contributed to eutrophication in Erhai Lake especially at the time of seasonal alternations. Our data provided important theoretical bases for the relationship between internal phosphorus loading and eutrophication in plateau lakes.

Seasonal succession, host associations and biochemical roles of aquatic viruses in a eutrophic lake plagued by cyanobacterial blooms

Viruses are implicated as important biogeochemical mediators and ecological drivers in freshwater ecosystems. However, the dynamics of viruses and host associations over the seasons and blooming periods in eutrophic freshwater ecosystems remain elusive. From the water microbiomes of planktonic biomass from Lake Taihu, a large and eutrophic lake that suffered from yearly Microcystis-dominated harmful algal blooms (HABs) in China, we recovered 41,997 unique viral clusters spanning a wide taxonomic range, including 15,139 Caudovirales clusters targeting bacteria and 1,044 NCLDV clusters targeting eukaryotes. The viral community exhibited distinct seasonal succession driven by microbial communities (mainly Cyanobacteria and Planctomycetes) and environmental factors (mainly nutrients and temperature). Host prediction highlighted a more distinct viral impact on bacteria-driven nitrogen pathways than phosphate cycling through infection. HAB-induced microbial and environmental variations affected viral strategies including lifestyles, host range, and virus-encoded auxiliary metabolic genes (vAMGs) distributions. Viruses infecting Proteobacteria and Actinobacteria showed enhanced lysogenic lifestyle and condensed host ranges during HAB peak in summer, while viruses infecting Bacteroidota selected the opposite strategy. Notably, vAMGs were most abundant before HAB outbreak in spring, compensating for host bacterial metabolism including carbohydrates metabolism, photosynthesis, and phosphate regulation. The elucidated relationship between viruses, host microbes, and bloom-associated environment suggested prominent biochemical roles in the eutrophic freshwater ecosystems.

The role of iron(II) excess and phosphate to synthesize hydroxychloride green rust

Green rust (GR) is a chemically reactive mineral of interest for environmental remediation. However, the lack of stability of this compound is a major drawback for practical applications. In this study, the precipitation of hydroxychloride green rust type 1 (GR1Cl) from soluble FeII and FeIII species was studied by analyzing pH titration curves and employing XRD, Raman and Mössbauer spectroscopies to find optimal conditions for synthesizing GR1Cl. Using the stoichiometric condition for FeII-FeIII corresponding to the [FeII3FeIII(OH)8]Cl compound, FeIIIO(OH)2.9Cl0.1 was formed in a first step during the addition of NaOH and then transformed into a mixture of GR1Cl and Fe3O4. The addition of phosphate anions (PO4) at a molar ratio PO4: Fe = 1: 10 in the initial solution was shown to avoid the formation of undesired magnetite. Interestingly, GR1Cl was also the only product without adding PO4 using an excess of FeII species in solution, i.e. for an initial ferric molar fraction x = FeIII: Fetot of 0.2. First experimental evidences of a hydroxyphosphate green rust type 2 GR2PO4 were also provided by XRD and Raman spectroscopy. Therefore, this work may attract interest for a better understanding of the geochemical cycle of iron and phosphate in natural environments such as hydromorphic soils or hydrothermal chimneys where fougerite, the mineral homologue of synthetic GR, is supposed to play a significant role.

Natural forest restoration enhanced abundance and changed composition of soil phosphorus cycling genes compared with plantations

Natural forest restoration enhanced abundance and changed composition of soil phosphorus cycling genes compared with plantations

Metagenomic Analysis Reveals the Effects of Different Land Use Types on Functional Soil Phosphorus Cycling: A Case Study of the Yellow River Alluvial Plain

Phosphorus (P) is a crucial limiting nutrient in soil ecosystems, significantly influencing soil fertility and plant productivity. Soil microorganisms adapt to phosphorus deficiency and enhance soil phosphorus effectiveness through various mechanisms, which are notably influenced by land use practices. This study examined the impact of different land use types (long-term continuous maize farmland, abandoned evolving grassland, artificial tamarisk forests, artificial ash forests, and wetlands) on soil phosphorus-cycling functional genes within the Tanyang Forest Farm in a typical region of the Yellow River alluvial plain using macro genome sequencing technology. The gene cluster related to inorganic phosphorus solubilization and organic phosphorus mineralization exhibited the highest relative abundance across different land use types (2.24 × 10−3), followed by the gene cluster associated with phosphorus transport and uptake (1.42 × 10−3), with the lowest relative abundance observed for the P-starvation response regulation gene cluster (5.52 × 10−4). Significant differences were found in the physical and chemical properties of the soils and the relative abundance of phosphorus-cycling functional genes among various land use types. The lowest relative abundance of soil phosphorus-cycling functional genes was observed in forestland, with both forestland types showing significantly lower gene abundance compared to wetland, farmland, and grassland. Correlation analysis and redundancy analysis (RDA) revealed a significant relationship between soil physicochemical properties and soil phosphorus-cycling functional genes, with ammonium nitrogen, organic carbon, total nitrogen, and pH being the main environmental factors influencing the abundance of these genes, explaining 70% of the variation in their relative abundance. Our study reveals land use’s impact on soil phosphorus-cycling genes, offering genetic insights into microbial responses to land use changes.

The Impact of Beneficial Microorganisms on Soil Vitality: A Review

The paper summarizes the literature on the critical impact of beneficial microorganisms on soil vitality. Common soil microorganisms, including bacteria, fungi, algae, protozoa, and viruses contribute significantly to enhancing soil fertility through processes such as nitrogen fixation, phosphorus solubilization and mobilization, sulfur cycle, composting, and heavy metal remediation. Their abundance and biomass vary significantly across taxa within the uppermost 15 cm of soil, with bacteria dominating numerically and fungi contributing substantially to biomass. These microorganisms mediate essential biogeochemical cycles in soil, including carbon, nitrogen, and phosphorus cycles, by facilitating the decomposition of organic matter and recycling soil nutrients. Nitrogen-fixing bacteria like Rhizobium are prevalent symbionts capable of biologically fixing nitrogen. Additionally, bacteria such as Micrococcus spp., Enterobacter aerogens, Pseudomonas capacia, fungi including Aspergillus niger, A. flavus, A. japonicas, Penicillum spp., and actinomycetes like Streptomyces play crucial roles in phosphorus solubilization, making phosphorus available for plant uptake. This synthesis underscores the critical role of beneficial microorganisms in maintaining soil vitality. These organisms interact with plants through beneficial relationships, influencing soil fertility dynamics by enhancing nutrient availability, promoting plant growth, and controlling pathogens. The use of biofertilizers has emerged as a sustainable strategy to improve crop yields and restore soil fertility, reducing environmental impacts linked to chemical fertilizers. Understanding the intricate dynamics of soil-beneficial microorganism and their interactions with Plants are pivotal for optimizing agricultural practices, ensuring long-term soil health, and enhancing productivity in sustainable farming systems.

Microbial Inoculants Modify the Functions of Resident Soil Microbes to Expedite the Field Restoration of the Abandoned Mine

ABSTRACTGlobal‐scale mining activities have had significant deleterious impacts on local ecosystems and the overall environment, which will necessitate robust restoration efforts. A practical approach includes combining microbial inoculants with the technology of external soil spray seeding. This approach holds the potential for sustainable abandoned mine site restoration by enhancing plant growth through the modulation of soil nutrients and microbial communities. Nonetheless, the detailed effects of microbial inoculants on specific aspects of soil microbial community functions and their complex interactions with plant growth remain underexplored, particularly in the context of restoration efforts. To bridge this gap, we performed a four‐year field study at an abandoned carbonate mine location, using metagenomic sequencing to evaluate the influence of microbial inoculants on soil microbial functionality. Our research revealed that introducing microbial inoculants greatly enhanced essential soil parameters and notably increased plant biomass. Additionally, these inoculants altered the functional gene makeup of the microbial community, significantly boosting the relative abundance of processes such as nitrogen fixation, nitrification, denitrification, assimilatory nitrate reduction (ANRA), dissimilatory nitrate reduction (DNRA), and organic phosphorus mineralization. Conversely, there was a decrease in the relative abundance of carbon degradation, phosphorus regulation, and transport processes. We observed strong correlations between the abundance of nitrogen and phosphorus cycles and plant biomass. Crucially, microbial inoculants affect plant biomass by initially altering soil properties and subsequently coordinating nitrogen and phosphorus cycles. These findings provide valuable insights into the role of microbial inoculants in mine site restoration and offer a theoretical foundation for their broader practical application.

Integrating Livestock with Crops and Forestry for Sustainability

Global per capita consumption of animal protein is set to rise, particularly in developing economies, leading to a dramatic increase in meat consumption from 133 million tons in 1980 to 452 million tons by 2050. Notably, 86% of this increase, or 279 million tons, is expected to occur in developing countries. The expansion of animal-based agricultural systems, which cover 45% of the Earth's land area, presents significant challenges. These systems contribute substantially to agricultural emissions, including greenhouse gases such as nitrous oxide (N2O) and methane (CH4), and account for 8% of global water usage. The livestock sector is largely comprised of resource-constrained smallholders in developing nations. Environmental impacts arise from the lack of integration with other agricultural and forestry practices, disrupting the natural cycles of carbon, water, nitrogen, phosphorus, and sulfur. This disruption leads to increased emissions of N2O and CH4, water contamination, land degradation, and biodiversity loss. To address these challenges and support the United Nations' Sustainable Development Goals (SDGs) related to poverty reduction (SDG #1), hunger alleviation (SDG #2), clean water and sanitation (SDG #6), and climate action (SDG #13), it is essential to integrate livestock with crop and tree farming. Strategies to improve sustainability include incorporating pastures into crop rotations, using controlled grazing techniques, practicing agro-forestry such as alley cropping, and implementing systems like ley farming. Additional measures include precision feeding and protein matching to reduce enteric fermentation, repurposing emissions of CH4 and N2O, and effective manure management. Addressing greenhouse gas emissions through diverse approaches, reducing product wastage, minimizing antibiotic use, and restoring rangelands to enhance soil carbon storage are also critical for achieving sustainable livestock practices.

Plant species modulate wildfire effects on soil phosphorus fractions in alpine forest of Eastern Tibetan Plateau

Global wildfires occurring with ever escalating frequency and intensity profoundly disrupt soil phosphorus (P) cycling in forest ecosystems. The impact of plant species on post-fire soil P transformation, particularly in alpine forests, remains largely unexplored. This study addressed this gap by investigating both bulk soils (BS) and root-zone soils (RS) across three plant species (shrub: Sophora davidii and Quercus aquifolioides, tree: Pinus densata) in the alpine forest of the eastern Tibetan Plateau, three years after a wildfire event. We examined variations in soil P fractions under varying wildfire intensities using the modified Hedley sequential extraction method. Compared to unburned soils, the burned soils exhibited significantly reduced organic P (Po) but increased inorganic P (Pi) concentrations in BS. However, both Pi and Po concentrations decreased in the burned RS, particularly for S. davidii and P. densata, indicating the effects of biological P utilization. The increased specific phosphatase activity and the ratio of carbon to Po suggested increased P limitation in the post-fire environment. Notably, the N2-fixer S. davidii primarily reduced labile P fractions through direct plant P uptake, while conifer tree species P. densata tended to deplete all extractable P fractions, probably through diverse P utilization strategies. Conversely, Q. aquifolioides did not significantly alter soil P fractions, likely due to its fire-resistant properties. These species-dependent impacts on post-fire P fractions were further corroborated by their distinct influences on soil and microbial traits. Our findings underscore the critical roles of functional-specific plant species in post-fire soil P dynamics in alpine forests, with conifer trees exhibiting the best P mining and utilization capacity.

Genetic architecture of phosphorus-use-efficiency across diverse environmental conditions: Insights from maize elite and landrace lines.

Phosphorus is an essential nutrient for all crops. Thus, a better understanding of the genetic control of phosphorus-use-efficiency reflected in physiological, developmental, and morphological traits and its environmental plasticity is required to establish the basis for maintaining or enhancing yield while making agriculture more sustainable. In this study, we utilized a diverse panel of maize (Zea mays L.), including 398 elite and landrace lines, phenotyped across three environments and two phosphorus fertilization treatments. We performed genome-wide association mapping for 13 traits, including phosphorus uptake and allocation, that showed a strong environment-dependency in their expression. Our results highlight the complex genetic architecture of phosphorus-use-efficiency as well as the substantial differences between the evaluated genetic backgrounds. Despite harboring more of the identified QTL, almost all of the favourable alleles from landraces were found to be present in at least one of the two elite heterotic groups. Notably, we also observed trait-specific genetic control even among biologically related characteristics, as well as a substantial plasticity of the genetic architecture of several traits in response to the environment and P fertilization. Collectively, our work illustrates the difficulties in improving phosphorus-use-efficiency but also presents possible solutions for the future contribution of plant breeding to improve the phosphorus cycle.

Assessing the influence of thermal structure variation on Fe and P mobility in sediments cores using Yellow Spring Instrument, diffusive gradient technology, and HR Peeper for sustainable water quality management.

The freshwater ecological characteristics in terms of the daily inventory of thermal stratification, spatial variation of O2 distribution, and the mobility of potentially toxic elements (PTEs) at the water sediment interface (WSI) are prudent freshwater assessment indices for water quality management protocol. The study conducted daily observations within a monsoon-influenced region, utilizing high-resolution techniques such as HR Peeper, Yellow Spring Instrument (YSI), and ZrO-Chelex diffusive gradient technology (DGT) to analyze PTEs, specifically phosphorus (P) and iron (Fe),within the water-sediment interface (WSI) under different temperatures and oxygen conditions. The 66-day field study showed that high thermal structure contributed significantly to production Fe ions and P from sediment under reductive dissolution of FeOOH. The study also revealed that P and Fe exhibited comparable spatial distribution patterns at the WSI, indicating a linked relationship between these PTEs. This correlation was reinforced by high Pearson correlation coefficients ranging from 0.7 to 0.9 (bilateral, p < 0.05) indicating that the concentrations of labile P were predominantly influenced by the release of phosphorus bound to iron. The fluxes of the PTEs were positive with a range of Fe, 3.3-81.5 mg/m2 day and P, 0.03-0.5 mg/m2 day showing the sediments liberated the PTEs into the benthic water. Again, high positive fluxes (Fe≈60 mg/m2 day, P≈0.5 mg/m2 day) for PTEs were obtained when stratification was high (anoxic conditions) and low (Fe≈5 mg/m2 day, P≈0.08 mg/m2 day) when stratification did not exist. This depicts that Fe/P dynamics were hinged mainly on hypoxic conditions in the benthic water under the reductive dissolution of FeOOH. The findings showed that organic materials (both solid and dissolved) correlated (> 0.7) significantly with (positive high values) Fe. This indicates that their interaction contributed to the reservoir water deterioration. However, Ca2⁺ and Mg2⁺ had little impact on the liberation of Fe-DOC-P from sediments due to their inability to compete with Fe for binding to DOC and P, as shown by their low correlation values. The research provides in-depth insights into the dynamics of PTEs on a daily timescale and offers valuable information for water management practices in inland reservoirs, particularly concerning the cycling of phosphorus (P) and its effects on ecosystem health.

Halophilic Phosphate-Solubilizing Microbes (Priestia megaterium and Bacillus velezensis) Isolated from Arabian Sea Seamount Sediments for Plant Growth Promotion.

Arabian Sea is a highly productive Ocean owing to deep upwelling with reports on phosphorus cycling in ocean sediments. In this study, microbes from sea mounts of the Arabian Sea at varying depths (400m, 900m) were screened to isolate and characterize phosphate-solubilizing bacteria (PSB) with plant growth-promoting properties. Out of the seven morphologically different PSBs, two bacterial strains with maximum phosphate solubilization index were identified as Priestia megaterium (H1) and Bacillus velezensis (H2) based on biochemical and molecular characteristics. Different factors influencing phosphatase production were optimized, which showed maximum solubilization at temperature of 30°C (97.5μg/mL), glucose as best carbon source (70µg/mL), 1-M NaCl (114.1µg/mL), and pH 8 (134.3µg/mL) indicating their halophilic and alkaliphilic characteristics. Alkaline phosphatase enzyme was extracted and partially purified from both PSBs wherein H2 strains showed greater specific activity (24.83 U/mg). Metabolomics studies through HPLC revealed maximum production of gluconic acid (483.75mg/L) in addition to lactic, oxalic, acetic, and succinic acid during solubilization. Biopriming effect of PSBs on tomato seed germination showed high germination index (80%) in consortia of both isolates which was also validated through root colonization by SEM analysis. Further studies using pot assay experiments also showed comparable results in marine PSB consortia with positive control (Phosphobacteria) for plant growth attributes including root height and weight. These findings suggest that the halophilic PSB strains from marine sediments could be used as potential bio-inoculants to enhance plant growth and combat saline stress for sustainable Agriculture.

Trapped Urban Phosphorus: An Overlooked and Inaccessible Stock in the Anthropogenic Phosphorus Cycle.

Urban landscapes are high phosphorus (P) consumption areas and consequently generate substantial P-containing urban solid waste (domestic kitchen wastes, animal bones, and municipal sludge), due to large population. However, urbanization can also trap P through cultivated land loss and urban solid waste disposal. Trapped urban P is an overlooked and inaccessible P stock. Here, we studied how urbanization contributes to trapped urban P and how it affects the P cycle. We take China as a case study. Our results showed that China generated a total of 13 (±0.9) Tg urban trapped P between 1992-2019. This amounts to 6 (±0.5) % of the total consumed P and 9 (±0.6) % of the chemical fertilizer P used in China over that period. The loss of cultivated land accounted for 15% of the trapped urban P, and half of this was concentrated in three provinces: Shandong, Henan, and Hebei. This is primarily since nearly one-third of the newly expanded urban areas are located within these provinces. The remaining 85% of trapped urban P was associated with urban solid waste disposal. Our findings call for more actions to preserve fertile cultivated land and promote P recovery from urban solid waste through sound waste classification and recycling systems to minimize P trapped in urban areas.

The combined nitrogen and phosphorus fertilizer application reduced soil multifunctionality in Qinghai-Tibet plateau grasslands, China

The impact of nitrogen (N) and phosphorus (P) fertilizer inputs on soil nutrient cycling and ecological function processes has garnered significant attention. Soil multifunctionality primarily refers to the soil's ability to perform multiple functions simultaneously, particularly the functions related to the genes involved in carbon (C), nitrogen (N), and phosphorus (P) cycles, which are critical for ecosystem sustainability. Despite this, the effects of N and P fertilizers on the expression of genes involved in soil carbon (C), nitrogen (N), and phosphorus (P) cycles, and their consequent influence on soil multifunctionality, remain unclear. To investigate this, we conducted a long-term nine-year experiment. The experimental site was fenced to prevent grazing and included four treatments: Control (no fertilizer), N (10 g N m−2 y−1, urea), P (5 g P m−2 y−1, Ca(H2PO4)2), and NP (10 g N and 5 g P m−2 y−1, urea and Ca(H2PO4)2). We examined the effects of these treatments on soil microbial functional gene abundance and multifunctionality. Our findings revealed that N addition altered the composition of soil microbial functional genes but did not affect functional diversity. Both N and P inputs, as well as their combination, negatively impacted soil carbon fixation and the genes encoding enzymes for the degradation of starch, hemicellulose, cellulose, and chitin. N input also disrupted soil nitrogen and phosphorus cycling by inhibiting the expression of soil denitrification genes (nirS and nosZ), phytate hydrolase gene (cphy), and a phosphatase gene (phoD). Additionally, P input significantly inhibited functional genes involved in soil nitrification, denitrification, ammonification, nitrogen fixation, and ammonia oxidation processes. It also adversely affected phytate synthesis and degradation. The combined N and P inputs had a substantial negative impact on soil nitrification (hao), denitrification (narG, nirK, nirS, and norZ), ammonification (gdh), nitrogen fixation, annamox, and nitrogen reduction, and inhibited the expression of soil phosphorus cycle genes. Long-term phosphorus application was found to have a more detrimental effect on soil multifunctionality compared to nitrogen application. Furthermore, our study showed that vegetation diversity and abundance are crucial drivers of soil carbon, nitrogen, and phosphorus cycling functional genes and multifunctionality. We concluded that N and P inputs alter soil multifunctionality by influencing vegetation diversity; therefore, maintaining vegetation diversity is essential for sustaining soil multifunctionality.

Circadian rhythms of microbial communities and their role in regulating nitrogen and phosphorus cycling in the rhizosphere of tea plants

Abstract The circadian clock mediates metabolic functions of plants and rhythmically shapes structure and function of microbial communities in the rhizosphere. However, it is unclear how the circadian rhythm of plant hosts regulates changes in rhizosphere bacterial and fungal communities and nutrient cycles. In the present study, we measured diel changes in the rhizosphere of bacterial and fungal communities, and in nitrogen (N) and phosphorus (P) cycling in 20-year-old tea plantations. The fungal communities were more stable in their responses to circadian changes than bacterial communities in the rhizosphere of the variants LJ43 and ZC108. Nevertheless, fungal genera with circadian rhythms were more numerous and had a higher abundance at midnight. Organic P and N mineralization in the rhizosphere was more intensive in LJ43 under day-night alterations, while inorganic N and P cycling were more easily affected by circadian rhythms in ZC108. The rhizosphere denitrification encoded by the genes AOA and AOB was intensive in the morning, irrespective of tea species. Genes related to rhizosphere N fixation (nifH) and denitrification (nosZ and nirK) expressed at greater levels in ZC108, and they reached a peak at midnight. Moreover, the diel rhythm of rhizosphere microbial communities in ZC108 largely regulated dial changes in N and P cycling. These results suggested that the bacterial and fungal communities in the rhizosphere respond differently to circadian rhythms, and they vary between tea species. The timing of bacterial and fungal cycling largely regulates rhizosphere N and P cycling and their ecological functions.

Long-term rice-crayfish farming alters soil dissolved organic carbon quality and biodegradability by regulating microbial metabolism and iron oxidation

The biodegradability of dissolved organic carbon (DOC) is a crucial process in the migration and transformation of soil organic carbon (SOC), and play a vital role in the global soil carbon (C) cycle. Although the significance of DOC in SOC transportation and microbial utilization is widely acknowledged, the impact of long-term rice-crayfish (RC) farming on the content, quality, and biodegradability of DOC in paddy soils, as well as regulatory mechanisms involved, remains unclear. To address this gap, a space-for-time method was employed to investigate the effects of different RC farming durations (1-, 5-, 10-, 15-, and 20- years) on the quality and biodegradability of DOC, as well as their relationship with soil microbial metabolism and minerals in this study. The results revealed that continuous RC farming increased the soil DOC content, but reduced DOC biodegradability. Specifically, after 20 years of continuous RC farming, the DOC content increased by 52.7% compared to the initial year, whereas the DOC biodegradability decreased by 63.4%. Analysis using three-dimensional fluorescence and ultraviolet spectroscopy demonstrated that continuous RC farming resulted in a decrease in the relative abundance of humus-like fractions, humification, and aromaticity indexes in DOC, but increased the relative abundance of protein-like fractions, biological, and fluorescence index, indicating that long-term RC farming promoted the simple depolymerization of the molecular structure of DOC. Continuous RC farming increased the activity of hydrolase involved in soil nitrogen (N) and phosphorus (P) cycles and oxidase, but decreasing the hydrolase C/N and C/P acquisition ratios; moreover, it also stimulated an increase in soil iron oxides and exchangeable calcium content. Structural equation modeling suggests that soil hydrolases and iron oxides are the primary drivers of DOC quality change, with DOC biodegradability being driven solely by soil iron oxides and not regulated by DOC quality. In conclusion, long-term RC farming promotes the catalytic decomposition of DOC aromatic substances and the production of DOC protein-like components by increasing soil oxidase activity and decreasing the hydrolase C/N acquisition ratio; these processes collectively contribute to the simple depolymerization of DOC molecular structure. Additionally, long-term RC farming induced legacy effects of soil iron oxides and enhanced chemical protection role leading to reduced DOC biodegradability. These findings suggested that long-term RC farming may reduce the rapid turnover and loss of DOC, providing a negative feedback on climate warming.