PFG NMR Research Articles

On the use of dioxane as reference for determination of the hydrodynamic radius by NMR spectroscopy

Measuring the compaction of a protein or complex is key to our understanding of the interactions within and between biomolecules. Experimentally, protein compaction is often probed either by estimating the radius of gyration (Rg) obtained from small-angle x-ray scattering (SAXS) experiments or the hydrodynamic radius (Rh) obtained, for example, by pulsed field gradient NMR (PFG NMR) spectroscopy. PFG NMR experiments generally report on the translational diffusion coefficient, which in turn can be used to estimate Rh using an internal standard to account for sample viscosity and uncertainty about the gradient strength. 1,4-Dioxane is one such commonly used internal standard, and the reference value of Rh is therefore important. We have revisited the basis for the commonly used reference value for the Rh of dioxane (2.12 Å) that is used to convert measured diffusion coefficients into a hydrodynamic radius. We followed the same approach that was used to establish the current reference value by measuring SAXS and PFG NMR data for a set of seven different proteins and using these as standards. Our analysis shows that the current Rh reference value for dioxane Rh is underestimated, and we instead suggest a new value of 2.27 ± 0.04 Å. Using this updated reference value results in a ∼7% increase in Rh values for proteins whose hydrodynamic radii have been measured by PFG NMR. These results are particularly important when the absolute value of Rh is of interest such as when determining or validating ensemble descriptions of intrinsically disordered proteins.

Gas self-diffusion in different local environments of mixed-matrix membranes as a function of UiO-66-NH2 metal–organic framework loading

This work focuses on quantification of microscopic self-diffusion of gas molecules in mixed-matrix membranes (MMMs) formed by dispersing UiO-66-NH2 metal–organic framework (MOF) crystals in 6FDA-Durene polyimide. Self-diffusion measurements were performed by 13C pulsed field gradient nuclear magnetic resonance (PFG NMR) for pure CO2 and CH4 with the spatial resolution in the range of 0.5–24 μm and for different MOF loadings between 12.5 and 50 weight percent. Diffusion measurements performed for each gas in the MMM with the lowest MOF loading of 12.5 weight percent yielded a single diffusivity for all measured diffusion times corresponding to a diffusion under the condition of a fast exchange between the UiO-66-NH2 crystals and the surrounding polymer phase. However, as the UiO-66-NH2 loading was increased, two molecular ensembles were observed for both CO2 and CH4: 1) an ensemble corresponding to diffusion inside UiO-66-NH2 crystals and through the MOF–polymer interfaces, and 2) an ensemble corresponding to diffusion mainly in the polymer phase of the MMMs. This behavior can be explained by the formation of MOF clusters at higher MOF loadings. Quantification of the intra-cluster diffusivity, average cluster size, and the dependence of these properties on the MOF loading are presented and discussed. The reported measurements can serve as a framework to quantify discrete microscopic diffusion characteristics and sizes of interconnected MOF clusters in MMMs as MOF loading increases to reach the desired outcome of gas percolation over a spanning MOF cluster, viz a cluster of interconnected MOF crystals spanning an entire MMM.

Cell wall permeability in relation to in vitro starch digestion of pea cotyledon cells

The role of cell wall permeability and rate of starch digestibility in intact cotyledon cells from four different varieties of pea seeds was studied. Pulsed-field gradient nuclear magnetic resonance (PFG NMR) coupled with light and confocal microscopy were employed to evaluate the cotyledon cells' diffusion coefficients and cell wall permeability. The cotyledon cells' diffusion coefficients and cell wall permeability followed a decreasing trend: White/yellow pea > Marrowfat pea > Maple pea > Blue pea. The varying size of internal cavities in the microstructure in the cotyledon cells, as observed by the light and confocal micrographs, may be responsible for this trend. The extent of starch hydrolysis recorded from the cotyledon cells followed the same trend of the cell wall permeability except for Blue pea cotyledon cells. Thus, indicating that the more permeable the cotyledon cell to the starch-degrading enzymes, the higher the extent of intracellular starch hydrolysis. The microstructure changes in the cotyledon cells during digestion also confirmed this observation.

Translational Mobility in Ternary Systems “Lithium Acetate–Cesium Acetate–Water” According to PFG NMR Data

Translational Mobility in Ternary Systems “Lithium Acetate–Cesium Acetate–Water” According to PFG NMR Data

MRI and PFG NMR studies of percolation effects in advanced melting during a cryoporometry characterisation of disordered mesoporous alumina

Cryoporometry (or thermoporometry) offers a way of pore structural characterisation for mesoporous materials that often needs little sample preparation, is relatively quick, and is statistically-representative for macroscopic samples. While it is well-known that freezing is controlled by pore-blocking, and is thus an invasion percolation process, the percolative nature of pore-to-pore co-operative advanced melting effects has been much less studied. In this work, PFG NMR studies, of diffusivity within the molten phase, have shown that the early melting process follows the scaling law, expected from percolation theory, below the percolation threshold. The percolation threshold thereby obtained was that for a 3D isotropic Poisson polyhedral lattice, consistent with the observation of patchwise macroscopic heterogeneities in the spatial distribution of local average pore size seen in MR relaxation time-weighted images. MRI has shown that once advanced melting effects kicked-in, around the percolation threshold, they occurred to different degrees in different slices along the length of the extrudate pellet. The macroscopic banding in pore-blocking, during freezing, and advanced melting effects, along the axis of the extrudate was consistent with anisotropic diffusional properties observed with MRI. Hence, it has been shown how the pore-pore co-operative effects can be utilised to improve structural characterisation of mesoporous solids.

Application of pfg NMR diffusometry to study diffusion and ionization phenomena in plasticized polymeric membranes doped with ionic liquids

Ionic liquids (ILs) are increasingly used as promising organic solvents for a variety of applications, including electrochemical processes, novel separation techniques and innovative methods of synthesis, due to their low volatility, excellent solvation properties, high ionic conductivity and electrochemical stability. Moreover, the tunable properties of ILs determined by their composition make them favorable candidates as dopants for composite and/or functional polymeric materials, e.g. in the membranes of chemical sensors. To effectively use ILs in polymeric materials and control the characteristics of the latter, one should develop a complete understanding of the properties of ILs in the polymeric phase, such as their diffusion and ionic behavior.In our previous work, we applied pulsed field gradient (PFG) NMR technique to verify the results of a chronopotentiometric method conventionally used to determine the diffusion coefficients and electrolytic properties of electrolytes in plasticized poly(vinyl chloride) (PVC) membranes of chemical sensors. The results obtained with these two independent methods were in good agreement, confirming that PEG NMR diffusometry is a viable technique for assessing the diffusion properties of species even in highly viscous polymeric media of low polarity.Here we report a comprehensive study of the transport and ionic behavior of IL 1-hexyl-3-methyl-1H-imidazolium bis[(trifluoromethyl)sulfonyl]amide ([C6Meim][NTf2]) in a poly(vinyl chloride) matrix, performed in situ by means of PFG NMR diffusometry. A number of sets of spectra for the 1H and 19F nuclei of the [C6Meim][NTf2] ionic liquid in PVC membranes doped with the plasticizer bis(2-ethylhexyl)sebacate were registered at different amplitudes of the magnetic field gradient. The mobility of both individual ions of the IL and the formed ion associates was investigated over a broad range of IL concentrations in the PVC matrix; in addition, the ionization degree and dissociation constant of [C6Meim][NTf2] were determined and their dependence on the IL content was traced.

Exploring the effect of molecular size and framework functionalisation on transport in metal-organic frameworks using pulsed-field gradient nuclear magnetic resonance.

Molecular transport is an important aspect in metal-organic frameworks (MOFs) as it affects many of their applications, such as adsorption/separation, drug delivery and catalysis. Yet probing the fundamental diffusion mechanisms in MOFs is challenging, and the interplay between the MOF's features (such as the pore structure and linker dynamics) and molecular transport remains mostly unexplored. Here, the pulsed-field gradient nuclear magnetic resonance (PFG NMR) technique is used to probe the diffusion of several probe molecules, i.e., water, xylenes and 1,3,5-triisopropylbenzene (TIPB), within the UiO-66 MOF and its derivatives (UiO-66NH2 and UiO-66Br). Exploiting differences in the size of probe molecules we were able to probe the diffusion rate selectively in the different pore environments of the MOFs. In particular, when relatively small molecules, such as water and small hydrocarbons, were used as probes, the PFG NMR log attenuation plots were non-linear with two distinctive diffusion regions, suggesting faster diffusion in the inter-crystalline space and slower diffusion within crystal aggregates, the latter occurring mostly inside the framework of the MOFs. Conversely, experiments with a larger probe molecule, i.e., TIPB, with a kinetic diameter of 0.95 nm, which makes it unable to access the framework windows of the MOF crystals, showed linear PFG NMR log attenuation plots, which indicates diffusion occurring in a single environment, most likely in the inter-crystalline space. Analysis of the apparent tortuosity values of the systems under investigation highlights the role of linker functionalisation in influencing the molecular diffusion of the probe molecules, which affects both intra-molecular interactions and pore accessibility within the MOF crystals. The findings of this work demonstrate that the diffusion behaviour of probe molecules within MOFs is influenced by the pore size, structure, functionalisation of the MOF linker and molecular interactions. Our study contributes to further advance the understanding of mass transport in MOFs by PFG NMR and provides insights that can inform the design and optimisation of MOF-based materials for various applications.

Diversity of hydrodynamic radii of intrinsically disordered proteins.

Intrinsically disordered proteins (IDPs) form an important class of biomolecules regulating biological processes in higher organisms. The lack of a fixed spatial structure facilitates them to perform their regulatory functions and allows the efficiency of biochemical reactions to be controlled by temperature and the cellular environment. From the biophysical point of view, IDPs are biopolymers with a broad configuration state space and their actual conformation depends on non-covalent interactions of its amino acid side chain groups at given temperature and chemical conditions. Thus, the hydrodynamic radius (Rh) of an IDP of a given polymer length (N) is a sequence- and environment-dependent variable. We have reviewed the literature values of hydrodynamic radii of IDPs determined experimentally by SEC, AUC, PFG NMR, DLS, and FCS, and complement them with our FCS results obtained for a series of protein fragments involved in the regulation of human gene expression. The data collected herein show that the values of hydrodynamic radii of IDPs can span the full space between the folded globular and denatured proteins in the Rh(N) diagram.

MWCNTs Decorated with TiO2 as Highly Performing Filler in the Preparation of Nanocomposite Membranes for Scalable Photocatalytic Degradation of Bisphenol A in Water.

Bisphenol A (BPA), an endocrine-disrupting compound with estrogenic behavior, is of great concern within the scientific community due to its high production levels and increasing concentration in various surface aquifers. While several materials exhibit excellent capacity for the photocatalytic degradation of BPA, their powdered nature and poor chemical stability render them unsuitable for practical application in large-scale water decontamination. In this study, a new class of nanocomposite membranes based on sulfonated polyethersulfone (sPES) and multiwalled carbon nanotubes decorated with TiO2 nanoparticles (MWCNTs-TiO2) were investigated as efficient and scalable photocatalysts for the photodegradation of BPA in aqueous solutions. The MWCNTs-TiO2 hybrid material was prepared through a facile and inexpensive hydrothermal method and extensively characterized by XRD, Raman, FTIR, BET, and TGA. Meanwhile, nanocomposite membranes at different filler loadings were prepared by a simple casting procedure. Swelling tests and PFG NMR analyses provided insights into the impact of filler introduction on membrane hydrophilicity and water molecular dynamics, whereas the effectiveness of the various photocatalysts in BPA removal was monitored using HPLC. Among the different MWCNTs-TiO2 content nanocomposites, the one at 10 wt% loading (sP-MT10) showed the best photoactivity. Under UV irradiation at 254 nm and 365 nm for 240 min, photocatalytic oxidation of 5 mg/L bisphenol A by sP-MT10 resulted in 91% and 82% degradation, respectively. Both the effect of BPA concentration and the membrane regenerability were evaluated, revealing that the sP-MT10 maintained its maximum BPA removal capability over more than 10 cycles. Our findings indicate that sP-MT nanocomposite membranes are versatile, scalable, efficient, and highly reusable photocatalysts for the degradation of BPA, as well as potentially for other endocrine disruptors.

Water Molecules' and Lithium Cations' Mobility in Sulfonated Polystyrene Studied by Nuclear Magnetic Resonance.

The hydration of ions and charge groups controls electro mass transfer through ion exchange systems. The self-diffusion and local mobility of water molecules as well as lithium cations in poly (4-styrenesulfonic acid) and its lithium, sodium and cesium salts were investigated for the first time using pulsed-field gradient NMR (PFG NMR) and NMR relaxation techniques. The temperature dependences of the water molecule and Li+ cation self-diffusion coefficients exhibited increasing self-diffusion activation energy in temperature regions below 0 °C, which is not due to the freezing of parts of the water. The self-diffusion coefficients of water molecules and lithium cations, as measured using PFG NMR, are in good agreement with the self-diffusion coefficients calculated based on Einstein's equation using correlation times obtained from spin-lattice relaxation data. It was shown that macroscopic water molecules' and lithium cations' transfer is controlled by local particles jumping between neighboring sulfonated groups. These results are similar to the behavior of water and cations in sulfonic cation exchanger membranes and resins. It was concluded that polystyrenesulfonic acid is appropriate model of the ionogenic part of membranes based on this polymer.

Probing Water Diffusion Inside Crystals of AlPO‐5 by PFG NMR and IRM for Heat Storage Applications

AbstractDiffusion of water in the aluminophosphates AlPO‐5 is studied using a combination of pulsed field gradient NMR and IR microimaging. The concentration profiles measured by the latter allowed to visualize the process of water sorption and propagation into the crystals of AlPO‐5. The self‐diffusion coefficients obtained by NMR were one order of magnitude higher values compared to corrected ones from the IR microimaging study. The concentration profiles allowed to visualize the process of water sorption and propagation into the crystals of AlPO‐5. The obtained results are compared with experimental and simulation data for the water/AlPO‐5 system for the literature and discussed in the context of its potential use for heat storage applications.

Self‐Diffusion of a Chemical Warfare Agent Simulant and Water in Nafion by Pulsed Field Gradient NMR

AbstractPulsed field gradient (PFG) NMR at high magnetic field was used to study microscopic diffusion of dimethyl methyl phosphonate (DMMP), a common chemical warfare agent (CWA) simulant, and water in Nafion membranes. PFG NMR measurements were performed for a broad range of molecular displacements. The self‐diffusivities were measured as a function of the DMMP concentration for several fixed water concentrations. The measured data suggest that DMMP and water diffuse in different regions of Nafion. While water mostly diffuses in hydrophilic regions of the membrane, viz. water channels, DMMP diffusion is mostly limited to interfacial perfluoroether regions between these water channels and the semi‐crystalline matrix.

Water and Molecular Exchange in Biological Cells Studied Using 1H Pulsed Field Gradient NMR.

This review presents the results of studies of molecular exchange processes in various biological systems (erythrocytes, yeast, liposomes, etc.) performed using pulsed field gradient NMR (PFG NMR). The main theory of processing necessary for the analysis of experimental data is briefly presented: the extraction of self-diffusion coefficients, calculation of cell sizes, and permeability of cell membranes. Attention is paid to the results of assessing the permeability of biological membranes for water molecules and biologically active compounds. The results for other systems are also presented: yeast, chlorella, and plant cells. The results of studies of the lateral diffusion of lipid and cholesterol molecules in model bilayers are also presented.

Complementary mass transport investigations in open-cell foams: Full-field CFD simulation with random-walk microscopic particle tracking and PFG NMR displacement measurements

Complementary mass transport investigations in open-cell foams: Full-field CFD simulation with random-walk microscopic particle tracking and PFG NMR displacement measurements

Interaction of Hyaluronan Acid with Some Proteins in Aqueous Solution as Studied by NMR

According to actual literature data, hyaluronic acid (HA) that is presented in the extracellular matrix can interact with proteins and thereby affect several important functions of the cell membrane. The purpose of this work was to reveal the features of the interaction of HA with proteins using the PFG NMR method by sampling two systems: aqueous solutions of HA with bovine serum albumin (BSA) and aqueous solutions of HA with hen egg-white lysozyme (HEWL). It was found that the presence of BSA in the HA aqueous solution initiates a certain additional mechanism; as a result, the population of HA molecules in the gel structure increases to almost 100%. At the same time, for an aqueous solution of HA/HEWL, even in the range of low (0.01-0.2%) HEWL contents, strong signs of degradation (depolymerization) of some HA macromolecules were observed such that they lost the ability to form a gel. Moreover, lysozyme molecules form a strong complex with degraded HA molecules and lose their enzymatic function. Thus, the presence of HA molecules in the intercellular matrix, as well as in the state associated with the surface of the cell membrane, can, in addition to the known ones, perform one more important function: the function of protecting the cell membrane from the destructive action of lysozymes. The obtained results are important for understanding the mechanism and features of the interaction of extracellular matrix glycosaminoglycan with cell membrane proteins.

Cooperative Proton and Li-ion Conduction in a 2D-layered MOF via Mechanical Insertion of Lithium Halides.

Ionic conduction in highly designable and porous metal-organic frameworks has been explored through the introduction of various ionic species (H+, OH-, Li+, etc.) using post-synthetic modification such as acid, salt, or ionic liquid incorporation. Here, we report on high ionic conductivity (σ > 10-2 S cm-1) in a two-dimensionally (2D)-layered Ti-dobdc (Ti2(Hdobdc)2(H2dobdc), H4dobdc: 2,5-dihydroxyterephthalic acid) via LiX (X= Cl, Br, I) intercalation using mechanical mixing. The anionic species in lithium halide strongly affect the ionic conductivity and durability of conductivity. Solid-state pulsed-field gradient nuclear magnetic resonance (PFG-NMR)verified the high mobility of H+ and Li+ ions in the temperature range of 300-400 K. In particular, the insertion of Li salts improved the H+ mobility above 373 K owing to strong binding with H2O. Furthermore, the continuous increase in Li+ mobility with temperature contributed to the retention of the overall high ionic conductivity at high temperatures.

Cooperative Proton and Li‐ion Conduction in a 2D‐Layered MOF via Mechanical Insertion of Lithium Halides

AbstractIonic conduction in highly designable and porous metal–organic frameworks has been explored through the introduction of various ionic species (H+, OH−, Li+, etc.) using post‐synthetic modification such as acid, salt, or ionic liquid incorporation. Here, we report on high ionic conductivity (σ>10−2 S cm−1) in a two‐dimensionally (2D)‐layered Ti‐dobdc (Ti2(Hdobdc)2(H2dobdc), H4dobdc: 2,5‐dihydroxyterephthalic acid) via LiX (X=Cl, Br, I) intercalation using mechanical mixing. The anionic species in lithium halide strongly affect the ionic conductivity and durability of conductivity. Solid‐state pulsed‐field gradient nuclear magnetic resonance (PFG NMR ) verified the high mobility of H+ and Li+ ions in the temperature range of 300–400 K. In particular, the insertion of Li salts improved the H+ mobility above 373 K owing to strong binding with H2O. Furthermore, the continuous increase in Li+ mobility with temperature contributed to the retention of the overall high ionic conductivity at high temperatures.

Features of Self-Diffusion of Tridecane Molecules in a Porous Medium of Kaolinite Used as a Model of a Chemically Inert Membrane

The present work focused on the experimental study of the specific features of self-diffusion of tridecane molecules in macroporous kaolinite, which is used as a raw material for the production of chemically inert membranes. The measurements of self-diffusion coefficients by pulsed magnetic field gradient nuclear magnetic resonance (PMFG NMR) revealed an increased translational mobility of tridecane molecules in kaolinite with incomplete filling of the pore space. This effect was accompanied by a sharp change in the slope of the Arrhenius plot of the self-diffusion coefficients of tridecane molecules in kaolinite. An analysis of the diffusion spin echo decay in the tridecane-kaolinite system revealed a discrepancy between the experimental data and the theoretical predictions, considering the effect of the geometry of porous space on molecular mobility. It was shown that the experimental results could be interpreted in terms of a model of two phases of tridecane molecules in the pores of kaolinite, in the gaseous and adsorbed state, coexisting under the fast-exchange conditions. Within the framework of the model, the activation energies of self-diffusion were calculated, which agreed satisfactorily with the experimental data. Additionally, the effects of the internal magnetic field gradients arising in a porous medium loaded with a gas or liquid on the data of the PFG NMR measurements were calculated. It was shown that the effect of magnetic field inhomogeneities on the measured self-diffusion coefficients of tridecane in kaolinite is small and could be neglected.

Vilsmeier Complex Promotes Polycondensation of Imidodisulfuryl Chloride with Diols: Preparation of Ionic Oligomer Electrolytes

We report polycondensation of imidodisulfuryl chloride with diol monomers in the presence of catalysts. The method proceeds via stabilization of imidodisulfuryl chloride by the formation of a complex with N,N-dimethylformamide. This compound is well known as a Vilsmeier complex. The method is versatile and permits the incorporation of alkyl monomers in the oligomer backbone, and a maximum of 17 repeating units is reported. Linear ionic oligomers with protons, lithium ions, and BF4– incorporated into the main chain are successfully produced to fabricate self-standing composite single-ion ionic membranes that exhibited good ionic conductivity and stability at high voltages. Pulsed-field gradient nuclear magnetic resonance (PFG NMR) has been utilized to investigate ion diffusion in membranes.

Effect of surfactant concentration on diffusion and microstructure in water-in-oil emulsions studied by low-field benchtop NMR and optical microscopy.

Emulsions are ubiquitous in many consumer products, including food, cosmetics and pharmaceuticals. Whilst their macroscopic characterisation is well-established, understanding their microscopic behaviour is very challenging. In our previous work we investigated oil-in-water emulsions by studying the effect of water on structuring and dynamics of such systems. In the present work, we investigate the effect of surfactant concentration on microstructure and diffusion within the water-in-oil emulsion system by using low-field pulsed-field gradient (PFG) NMR studies carried out with a benchtop NMR instrument, in conjunction with optical imaging. The results reveal that at high surfactant concentration the formation of smaller droplets gives rise to a third component in the PFG NMR attenuation plot, which is mostly attributed to restricted diffusion near the droplet boundaries. In addition, structuring effects due to increase in surfactant concentration at the boundaries could also contribute to further slowing down water diffusion at the boundaries. As the surfactant concentration decreases, the average droplet size becomes larger and both restriction and structuring effects at the droplet boundaries become less significant, as suggested by the PFG NMR plot, whereby the presence of a third diffusion component becomes less pronounced.