The Megadesmidae (Bivalvia, Anomalodesmata) fossil record was examined in order to assess the role of taphonomy in cladistic analysis. Megadesmids are thick-shelled, infaunal, suspension-feeding bivalves. Our data indicate that their fossil record seems biased in favor of thick-shelled, shallow-burrowing genera and/or deepburrowing forms. Consequently, there is a relation between the mode of life (shallow versus deep) and the resolution and quality of the fossil record. Deep-burrowers (Vacunella) are often preserved in life position offering a more accurate (temporal and spatial) fossil record, adequate for paleoecological inferences, while shallow-burrower shells (Plesiocyprinella), that are more prone to post-mortem transport and temporal mixing, offer a record with poor spatial and temporal resolution. The identification of homoplasy among infauna! bivalves constitutes a major challenge for their cladistic analysis. Within Megadesmidae intrinsic (bauplan limitations) and extrinsic (better preservational potential) factors favor the occurrence and preservation of homoplasy among the deep-burrowers. The implications are: a) clustering of deep-burrowing bivalves (Vacunella, Roxoa) due to parallel homoplasies, forming "adaptive", not necessarily "evolutive" taxa, and b) lower consistency indices in their cladistic analysis.