Peptide-conjugated Antisense Oligonucleotides Research Articles

An Induced Pluripotent Stem Cell-Derived Human Blood-Brain Barrier (BBB) Model to Test the Crossing by Adeno-Associated Virus (AAV) Vectors and Antisense Oligonucleotides.

The blood-brain barrier (BBB) is the specialised microvasculature system that shields the central nervous system (CNS) from potentially toxic agents. Attempts to develop therapeutic agents targeting the CNS have been hindered by the lack of predictive models of BBB crossing. In vitro models mimicking the human BBB are of great interest, and advances in induced pluripotent stem cell (iPSC) technologies and the availability of reproducible differentiation protocols have facilitated progress. In this study, we present the efficient differentiation of three different wild-type iPSC lines into brain microvascular endothelial cells (BMECs). Once differentiated, cells displayed several features of BMECs and exhibited significant barrier tightness as measured by trans-endothelial electrical resistance (TEER), ranging from 1500 to >6000 Ωcm2. To assess the functionality of our BBB models, we analysed the crossing efficiency of adeno-associated virus (AAV) vectors and peptide-conjugated antisense oligonucleotides, both currently used in genetic approaches for the treatment of rare diseases. We demonstrated superior barrier crossing by AAV serotype 9 compared to serotype 8, and no crossing by a cell-penetrating peptide-conjugated antisense oligonucleotide. In conclusion, our study shows that iPSC-based models of the human BBB display robust phenotypes and could be used to screen drugs for CNS penetration in culture.

G.P.132: Pre-clinical development of peptide-conjugated antisense oligonucleotides for myotonic dystrophy type 1 (DM1)

Myotonic dystrophy type 1 (DM1) is a multisystemic neuromuscular disorder caused by an expanded CTG repeat in the 3′ UTR of the DM protein kinase (DMPK) gene, resulting in formation of toxic RNA aggregates that interfere with RNA splicing and dysregulate normal cell function. RNA-modulation by antisense oligonucleotides (AONs) represents an interesting therapeutic approach for DM1 and is currently in pre-clinical development. We have previously obtained molecular proof-of-concept for a panel of AONs that target the CUG expansion and result in efficient knockdown of toxic RNA in DM1 patient myoblasts with different repeat expansion lengths and in cultured muscle cells derived from DM500 mice. To facilitate systemic AON delivery and uptake, we used a 7-amino acid linear muscle targeting peptide (PP08) and conjugated this to different CUG-targeting AONs. We have shown that these peptide-conjugated AONs are well tolerated and do not result in complement activation in human and monkey plasma or induce cytokine release in human whole blood in vitro safety assays. Subcutaneous administration of peptide-conjugated AONs in different DM1 mouse models (DM500, HSALR) resulted in enhanced tissue PK levels in several tissues of relevance for DM1 such as skeletal muscle and brain, indicating that the peptide-AON displayed efficient tissue uptake and was even able to pass the blood–brain-barrier. The higher tissue levels were accompanied by an increased knockdown of mutant RNA compared to non-conjugated AONs. Besides inducing a significant RNA knockdown, peptide-conjugated AONs resulted in a mild but statistically significant reduction of myotonia in gastrocnemius and tibialis muscles of HSALR mice, as determined by EMG analysis. These data demonstrate that peptide-AONs targeting the CUG-repeat have potential in a multisystemic therapeutic approach for DM1.

P08 Optimal dystrophin mini-construct for gene delivery to skeletal muscle

Selective removal of exons flanking an out-of-frame DMD mutation can result in an in-frame mRNA transcript that may be translated into an internally-deleted, Becker muscular dystrophy (BMD)-like but functionally active dystrophin protein with therapeutic activity. Antisense oligonucleotides (AOs) have been designed to bind to complementary sequences in the targeted mRNA and modify premRNA splicing to correct the reading frame of a mutated transcript so that gene expression is restored. The rapid steady advances made in this field suggest that it is likely that AO-induced exon skipping will be the first gene therapy for DMD to reach the clinic. Indeed two different chemistries of AO continue to show encouraging results in clinical trials targeted at skipping exon 51 of the DMD gene, skipping of which would have the potential to treat 13% of DMD patients. However, the different deletions that cause DMD would require skipping of different exons, and the clinical workup of other AOs. A major UK consortium is currently developing a peptide-conjugated AO for the targeted skipping of exon 53 for use in the next clinical trial. This AO would have the potential to treat 8% of DMD patients. Detailed comparative analysis of an array of overlapping conjugated and naked AOs has been performed in DMD patient cells and the choice of AO for the next clinical trial will be presented.

Physiological Characterization of Muscle Strength With Variable Levels of Dystrophin Restoration in mdx Mice Following Local Antisense Therapy

Antisense-induced exon skipping can restore the open reading frame, and thus correct the dystrophin deficiency that causes Duchenne muscular dystrophy (DMD), a lethal muscle wasting condition. Successful proof-of-principle in preclinical models has led to human clinical trials. However, it is still not known what percentage of dystrophin-positive fibers and what level of expression is necessary for functional improvement. This study directly address these key questions in the mdx mouse model of DMD. To achieve a significant variation in dystrophin expression, we locally administered into tibialis anterior muscles various doses of a phosphorodiamidate morpholino oligomer (PMO) designed to skip the mutated exon 23 from the mRNA of murine dystrophin. We found a highly significant correlation between the number of dystrophin-positive fibers and resistance to contraction-induced injury, with a minimum of 20% of dystrophin-positive fibers required for meaningful improvement. Furthermore, our results also indicate that a relatively low level of dystrophin expression in muscle fibers may have significant clinical benefits. In contrast, improvements in muscle force were not correlated with either the number of positive fibers or total dystrophin levels, which highlight the need to conduct appropriate functional assessments in preclinical testing using the mdx mouse.

Functional Rescue of Dystrophin-deficient mdx Mice by a Chimeric Peptide-PMO

Splice modulation using antisense oligonucleotides (AOs) has been shown to yield targeted exon exclusion to restore the open reading frame and generate truncated but partially functional dystrophin protein. This has been successfully demonstrated in dystrophin-deficient mdx mice and in Duchenne muscular dystrophy (DMD) patients. However, DMD is a systemic disease; successful therapeutic exploitation of this approach will therefore depend on effective systemic delivery of AOs to all affected tissues. We have previously shown the potential of a muscle-specific/arginine-rich chimeric peptide-phosphorodiamidate morpholino (PMO) conjugate, but its long-term activity, optimized dosing regimen, capacity for functional correction and safety profile remain to be established. Here, we report the results of this chimeric peptide-PMO conjugate in the mdx mouse using low doses (3 and 6 mg/kg) administered via a 6 biweekly systemic intravenous injection protocol. We show 100% dystrophin-positive fibers and near complete correction of the dystrophin transcript defect in all peripheral muscle groups, with restoration of 50% dystrophin protein over 12 weeks, leading to correction of the DMD pathological phenotype and restoration of muscle function in the absence of detectable toxicity or immune response. Chimeric muscle-specific/cell-penetrating peptides therefore represent highly promising agents for systemic delivery of splice-correcting PMO oligomers for DMD therapy.

Cell-penetrating peptide-conjugated antisense oligonucleotides restore systemic muscle and cardiac dystrophin expression and function

Antisense oligonucleotides (AOs) have the potential to induce functional dystrophin protein expression via exon skipping by restoring in-frame transcripts in the majority of patients suffering from Duchenne muscular dystrophy (DMD). AOs of morpholino phosphoroamidate (PMO) and 2′-O-methyl phosphorothioate RNA (2′Ome RNA) chemistry have been shown to restore dystrophin expression in skeletal muscle but not in heart, following high-dose systemic delivery in murine models of muscular dystrophy (mdx). Exploiting the cell transduction properties of two basic arginine-rich cell penetrating peptides, we demonstrate widespread systemic correction of dystrophin expression in body-wide muscles and cardiac tissue in adult dystrophic mdx mice, with a single low-dose injection of peptide-conjugated PMO AO. This approach was sufficient to restore uniform, high-level dystrophin protein expression in peripheral muscle and cardiac tissue, with robust sarcolemmal relocalization of the dystrophin-associated protein complex and functional improvement in muscle. Peptide-conjugated AOs therefore have significant potential for systemic correction of the DMD phenotype.

T.P.2.10 Restoration of dystrophin expression in mdx mouse by peptide-conjugated antisense oligonucleotides

T.P.2.10 Restoration of dystrophin expression in mdx mouse by peptide-conjugated antisense oligonucleotides

431. Targeted Restoration of Dystrophin Expression in DMD by Peptide-Conjugated Antisense Oligonucleotides

431. Targeted Restoration of Dystrophin Expression in DMD by Peptide-Conjugated Antisense Oligonucleotides

Peptide-conjugated antisense oligonucleotides for targeted inhibition of a transcriptional regulator in vivo

Transcription factors are important targets for the treatment of a variety of malignancies but are extremely difficult to inhibit, as they are located in the cell's nucleus and act mainly by protein-DNA and protein-protein interactions. The transcriptional regulators Id1 and Id3 are attractive targets for cancer therapy as they are required for tumor invasiveness, metastasis and angiogenesis. We report here the development of an antitumor agent that downregulates Id1 effectively in tumor endothelial cells in vivo. Efficient delivery and substantial reduction of Id1 protein levels in the tumor endothelium were effected by fusing an antisense molecule to a peptide known to home specifically to tumor neovessels. In two different tumor models, systemic delivery of this drug led to enhanced hemorrhage, hypoxia and inhibition of primary tumor growth and metastasis, similar to what is observed in Id1 knockout mice. Combination with the Hsp90 inhibitor 17-(allylamino)-17-demethoxygeldanamycin yielded virtually complete growth suppression of aggressive breast tumors.