Botryosphaeria dothidea is a significant plant pathogen responsible for causing ulcers, wilt, and fruit decay across a wide range of host plants. One notable fungal disease attributed to B. dothidea is pear tree ring rot, which currently ranks among the most severe diseases affecting pear trees in China. This pathogen primarily targets branches and fruits, occasionally impacting leaves as well, leading to tree weakening, fruit rot, and leaf drop. The annual repercussions of this disease severely affect both the yield and quality of pear fruits, thereby impeding the healthy development of the pear industry. Recent studies have indicated that other species within the B. dothidea complex can also induce pear ring rot; however, specific physiological strains of B. dothidea remain unreported. Consequently, this study collected tissues from pear trees infected with ring rot from orchards located in Liaoning, Hebei, Shandong, and other regions throughout China. Through morphological characterization combined with pathogenicity assessments and DNA sequence comparisons involving partial internal transcribed spacer (ITS), translation elongation factor (TEF), and β-tubulin (TUB) genes, 21 strains belonging to the Botryosphaeria spp. were identified. These 21 strains served as research subjects for inoculating dormant annual branches from 30 germplasm resources of pear trees in vitro. The results demonstrated that all tested strains could induce lesions on the branches which were characterized by dark brown spots. Furthermore, inoculation experiments involving these 21 strains were conducted to evaluate the resistance levels of various pear varieties against ring rot disease. The resistance was assessed by inoculating different isolates onto distinct pear varieties; this approach established the criteria for evaluating resistance while minimizing identification errors stemming from the variable responses exhibited by certain varieties towards individual strains. Ultimately, this study aims to provide a theoretical foundation for effective prevention and treatment strategies against pear ring rot.