We adopted a simple and rapid measurement method to analyze the concentrations of monosaccharides (MCHO) and polysaccharides (PCHO) in carbohydrates, a subset of organic carbon found in size-fractionated atmospheric particles. Seasonal and source-related factors influenced carbohydrate concentrations, with total water-soluble carbohydrates (TCHO) accounting for approximately 23% of the water-soluble organic carbon (WSOC) in spring when biological activity was high. We observed that the mode of aerosol transport significantly influenced the particle size distribution of carbohydrates, with MCHO exhibiting relatively high concentrations in fine particles (<1 μm) and PCHO showing higher concentrations in coarse particles (>1 μm). Moreover, our results revealed that MCHO and PCHO contributed 51% and 49%, respectively, to the TCHO concentration. This contribution varied by approximately ±19% depending on the season, suggesting the importance of both MCHO and PCHO. Additionally, through the combined use of principal component analysis (PCA) and positive matrix factorization (PMF), we determined that biomass burning accounts for 30% of the aerosol. Notably, biomass burning accounts for approximately 52% of the WSOC flux, with MCHO accounting for approximately 78% of the carbon from this source, indicating the substantial influence of biomass burning on aerosol composition. The average concentration of TCHO/WSOC in the atmosphere was approximately 18%, similar to the marine environment, reflecting the relationship between the biogeochemical cycles of the two environments. Finally, the fluxes of MCHO and PCHO were 1.10 and 5.28 mg C m−2 yr−1, respectively. We also found that the contribution of atmospheric deposition to marine primary productivity in winter was 15 times greater than that in summer, indicating that atmospheric deposition had a significant impact on marine ecosystems during nutrient-poor seasons. Additionally, we discovered that WSOC accounts for approximately 62% of the dissolved organic carbon (DOC) in the Min River, suggesting that atmospheric deposition could be a major source of organic carbon in the region.