OP Samples Research Articles

Diagnostic utility of oropharyngeal swabs as an alternative to lower respiratory tract samples for PCR-based syndromic testing in patients with community-acquired pneumonia.

Syndromic PCR-based analysis of lower respiratory tract (LRT) samples in patients with community-acquired pneumonia (CAP) improves the bacterial yield and time-to-results compared to culture-based methods. However, obtaining adequate sputum samples can be challenging and is frequently not prioritized in the emergency department (ED). In this study, we assess the concordance of microbiological detections between oropharyngeal- (OP) and LRT samples from patients presenting to the ED with CAP using a syndromic PCR-based respiratory panel [Biofire FilmArray Pneumonia plus (FAP plus)]. Paired OP- and high-quality LRT samples were collected from 103 patients with confirmed CAP, who had been included in a randomized controlled trial (NCT04660084) or a subsequent observational study at Haukeland University Hospital, and analyzed using the FAP plus. The LRT samples were obtained mainly by sputum induction (88%). Using the LRT samples as a reference standard, the positive percent agreement (PPA), negative percent agreement (NPA), and overall percent agreement for the most common bacterial pathogens in CAP, Streptococcus pneumoniae and Haemophilus influenzae, were 85%, 99% and 95%, and 86%, 98% and 93%, respectively. For Moraxella catarrhalis, the PPA was lower (74%), while the NPA was 100%. For bacteria that are less likely causes of uncomplicated CAP (e.g., Staphylococcus aureus and Enterobacterales) the results were more divergent. In conclusion, the FAP plus detects the most common CAP pathogens S. pneumoniae and H. influenzae from OP samples with high PPAs and excellent NPAs when compared with LRT samples. For these pathogens, the PPAs for OP samples were higher than previous reports for nasopharyngeal samples. This suggests that analysis of OP samples with syndromic PCR panels could represent an alternative approach for rapid microbiological testing in the ED, especially in patients where LRT samples are difficult to obtain. Divergent results for bacteria that are less likely to cause uncomplicated CAP do, however, emphasize the need for clinical evaluation of positive test results.

MiR-215-5p regulates osteoporosis development and osteogenic differentiation by targeting XIAP

BackgroundOsteoporosis (OP) is a metabolic disease that involves microstructure destruction and fracture damage. The present study probed into the significance of miR-215-5p in OP progression.MethodsSerum samples were collected from surgical patients and healthy controls. qRT-PCR analysis was utilized to determine the miR-215-5p level in clinical samples and human bone mesenchymal stem cells (hBMSCs) induced by β-glycerol phosphate. A dual luciferase reporter assay was exploited to examine the targeted relationship between miR-215-5p and XIAP. The mineralization and calcium deposition of hBMSCs were assessed by detection of ALP activity, Alizarin red staining, and osteoblast marker expression. Protein expression was determined by western blot analysis.ResultsMiR-215-5p was significantly reduced in patients with OP and increased in hBMSCs treated with β-glycerophosphate. Enhanced miR-215-5p level triggered augment in osteoblast markers (Alkaline phosphatase/ ALP, Osteocalcin/ OCN, and Runt-Related Transcription Factor 2/ Runx2), which was accompanied by the increase of ALP activity in hBMSCs and accumulation of Calcium. Functional experiments show that XIAP was a target of miR-215-5p and negatively modulated by miR-215-5p. XIAP expression levels were increased in OP samples, and decreased XIAP in β-glycerophosphate-treated hBMSCs inhibited its’ osteogenic differentiation. Functional loss and acquisition experiments depicted that miR-215-5p promoted the differentiation of hBMSCs by inhibiting the XIAP level, playing a protective role in the pathogenesis of OP.Conclusionsβ-glycerophosphate promoted the osteogenic differentiation of hBMSCs, increased miR-215-5p level, and decreased XIAP. miR-215-5p stimulated osteogenic differentiation of hBMSCs by targeting XIAP, shedding new insights for the detection and therapy of OP.

Uncovering the Key miRNAs and Targets of the Liuwei Dihuang Pill in Diabetic Nephropathy-Related Osteoporosis based on Weighted Gene Co-Expression Network and Network Pharmacology Analysis.

Diabetic nephropathy-related osteoporosis (DNOP) is the most common comorbid bone metabolic disorder associated with diabetes mellitus (DM). The Liuwei Dihuang Pill (LWD) is a traditional Chinese herbal medicine widely used to treat diabetic complications, including diabetic nephropathy (DN). This study aimed to identify the biomarkers of the mechanisms of DNOP in LWD with systems biology approaches. Herein, we performed an integrated analysis of the GSE51674 and GSE63446 datasets from the GEO database via weighted gene co-expression network and network pharmacology (WGCNA) analysis. In addition, a network pharmacology approach, including bioactive compounds, was used with oral bioavailability (OB) and drug-likeness (DL) evaluation. Next, target prediction, functional enrichment analysis, network analysis, and virtual docking were used to investigate the mechanisms of LWD in DNOP. WGCNA successfully identified 63 DNOP-related miRNAs. Among them, miR-574 was significantly upregulated in DN and OP samples. A total of 117 targets of 22 components associated with LWD in DNOP were obtained. The cellular response to nitrogen compounds, the AGERAGE signaling pathway in diabetic complications, and the MAPK signaling pathway were related to the main targets. Network analysis showed that kaempferol and quercetin were the most significant components. MAPK1 was identified as a potential target of miR-574 and the hub genes in the protein-protein interaction (PPI) network. The docking models demonstrated that kaempferol and quercetin had a strong binding affinity for Asp 167 of MAPK1. This study demonstrated that miR-574 may play important roles in DNOP, and the therapeutic effects of kaempferol and quercetin on LWD in DNOP might be mediated by miR-574 by targeting MAPK1. Our results provide new perspectives for further studies on the anti-DNOP mechanism of LWD.

Comparative assessment of Al2O3-modified biomasses from agricultural residues for nickel and cadmium removal

The biodiversity of aqueous environments has been affected due to the disposal of wastewater highly contaminated with heavy metal ions, causing much damage to ecosystems. These pollutants are very toxic and bioaccumulate in living organisms. This work attempts to evaluate the adsorption of nickel ad cadmium ions using three biomasses from agricultur-al residues (corn cob – CC, orange peel – OP, and oil palm bagasse – PB) modified with alumina nanoparticles. The bio-masses were characterized via compositional analysis and a point of zero charges to quantify the presence of lignin, cellu-lose, hemicellulose, and the feasible pH, taking advantage of the biomass charge. After modification with Al2O3 nanoparti-cles. The resulting adsorbents were characterized via FT-IR analysis to identify the functional groups that most contributed to the adsorption performance. Furthermore, the influence of Al2O3 nanoparticles was analysed on the adsorption capacities of the evaluated biomasses using batch systems at a temperature of 25°C and pH 6. All biomasses displayed a high content of cellulose, estimating a weight percentage of about 19.9%, 14.3%, and 13.1% for PB, OP, and CC samples, respectively. The FT-IR spectrum confirmed hydroxyl and carboxyl functional groups, which contribute to enhancing the adsorption capacities of the modified biomasses. Functional adsorption capacity was observed for all biomasses after modification with Al2O3 nanoparticles, achieving at pH 6.0 a cadmium removal from 92% (CC-Al2O3 and PB-Al2O3) up to 95.8±0.3% (OP-Al2O3). In nickel ions, it was estimated a broader adsorption capacity at pH 6.0 of about 86±0.4% after using the CC-Al2O3 sample, 88±0.1% for the PB-Al2O3 adsorbent, and 98±0.2% for the OP-Al2O3 sample, confirming the suitability of these Al2O3-modified biomasses for the removal of heavy metal ions.

Trace Element Levels in Native Plant Species around the Industrial Site of Puchuncaví-Ventanas (Central Chile): Evaluation of the Phytoremediation Potential

The present work investigates the uptake of selected trace elements (Cu, Sb, As, Pb, Cd, Zn, Cr, Mn, Ni, V, and Co) from soil and their accumulation in the biomass samples (leaves and flowers) of three selected native plants (namely Oenothera picensis, OP; Sphaeralcea velutina, SV; and Argemone subfusiformis, AS) around an industrial area (Puchuncaví-Ventanas) located in the Puchuncaví valley, in the central region of Chile. Primary emission sources in the area come from a copper refinery, coal-fired power plants, and a set of 14 other different industrial facilities. Trace element measurements in the native plants of this area and the ability to transfer of these pollutants from soil to plants (transfer factor) have been assessed in order to identify the potential use of these plant species for phytoremediation. Preliminary results showed a high concentration of trace elements in the OP, SV, and AS samples. The concentration of these elements in the plants was found to be inversely correlated to the distance of the primary emission sources. Moreover, the high concentrations of trace elements such as Cu, As, Cr and V, upon the toxic limits in the native plant species, suggest the need for continuous monitoring of the region. The OP species was identified as the plant with the highest capacity for trace elements accumulation, which also showed higher accumulation potential in whole aerial parts than in leaves. Transfer factor values suggested that these native plants had phytoremediation potential for the elements Cu, Pb, As, Ni, and Cr. This study provides preliminary baseline information on the trace element compositions of important native plants and soil in the Puchuncaví-Ventanas area for phytoremediation purposes.

HPLC-HRMS Global Metabolomics Approach for the Diagnosis of "Olive Quick Decline Syndrome" Markers in Olive Trees Leaves.

Olive quick decline syndrome (OQDS) is a multifactorial disease affecting olive plants. The onset of this economically devastating disease has been associated with a Gram-negative plant pathogen called Xylella fastidiosa (Xf). Liquid chromatography separation coupled to high-resolution mass spectrometry detection is one the most widely applied technologies in metabolomics, as it provides a blend of rapid, sensitive, and selective qualitative and quantitative analyses with the ability to identify metabolites. The purpose of this work is the development of a global metabolomics mass spectrometry assay able to identify OQDS molecular markers that could discriminate between healthy (HP) and infected (OP) olive tree leaves. Results obtained via multivariate analysis through an HPLC-ESI HRMS platform (LTQ-Orbitrap from Thermo Scientific) show a clear separation between HP and OP samples. Among the differentially expressed metabolites, 18 different organic compounds highly expressed in the OP group were annotated; results obtained by this metabolomic approach could be used as a fast and reliable method for the biochemical characterization of OQDS and to develop targeted MS approaches for OQDS detection by foliage analysis.

Evaluation of Saline as Potential Alternative to Viral Transport Media for COVID-19 Samples Stored at Different Temperatures

Introduction: Severe acute respiratory syndrome coronavirus-2 (SARS CoV 2) virus, a causative agent of COVID-19 has led to universal pandemic. During this pandemic there has been an acute shortage of good quality Viral Transport Medium (VTM) because of increase in number of infected people worldwide. It is also difficult to maintain the transport and storing conditions in line with the guidelines in pandemics. Aim: To assess the feasibility of Oropharyngeal Swab (OP)/Nasal swabs in 0.9% normal saline in place of VTM and to analyse the effect of temperature on nucleic acid detection by rRT PCR on saline samples stored at 4ºC, ambient and at higher temperature (37ºC). Materials and Methods: The present study was an observational analytical study which included 94 positive and 5 negative samples. Patients' nasal or OP samples were collected as dry swabs and in VTM. Normal saline was added once the samples were received in the laboratory. PCR was done with saline and VTM samples both on day 1. Samples were aliquotted in 3 sets and one set was kept at 4º-8º C and other two at 25ºC and 37ºC, respectively. All positive samples were further tested on day 3, day 4 and day 6. Results were analysed and compared. Results: Samples in normal saline showed very good sensitivity at all temperatures (4º-8ºC, 25ºC and 37ºC) till day 6. Both the swab samples (in saline and in VTM) showed nearly 100% agreement in rRT-PCR results. Ct value variation was also ≤±2. Conclusion: Looking into the cost and logistics issues especially during pandemics, saline is a good and cheaper alternative to VTM and with its use, testing capacity can be expanded.

An Evaluation of Pooling Strategies for RT-qPCR testing for SARS-CoV-2 Infection

Background and Objectives. Sample pooling of COViD-19 PCR tests has been recently proposed as a low-cost alternative to individual tests. This multi-site, laboratory-based, proof-of-concept study explores the feasibility of pooled SARS-CoV-2 RT-qPCR testing, by demonstrating the effect of pooling on sensitivity, specificity, accuracy, number of tests saved, and turnaround time. Methodology. The research was conducted in two experiments. In Experiment 1, archival nasopharyngeal (NPS) and oropharyngeal (OPS) swab samples were diluted to simulate 5, 10, and 20 sized pools, and tested for SARS-CoV-2 RNA using RT-qPCR. In Experiment 2, actual nasopharyngeal and oropharyngeal swab samples were collected from asymptomatic low-risk volunteers. Aliquots of the samples were pooled following the 5, 10-5, and 20-10-5 multi-staged Dorfman pooling methods and tested. The sensitivity, specificity, accuracy, test savings, and turnaround time for each pooling method were documented. Results and Conclusions. The study provided evidence that pooling of NP and OP samples for SARS-CoV-2 RNA detection using RT-qPCR is feasible and can be implemented in the Philippines. A 2-stage Dorfman 5 pooling strategy appears to be the best method, because it has the highest over-all accuracy, while still achieving acceptable test savings, and turnaround time. Pooling of nasopharyngeal and oropharyngeal swab samples prior to RT-qPCR testing may be considered by select molecular diagnostic laboratories to further increase testing capacity and at the same time reduce the cost of testing.

Diamondoid geochemistry of Niger Delta source rocks: implication for petroleum exploration

ABSTRACT Investigation on the use of diamondoids to assess the extent of thermal maturity, depositional environment, and origin of Niger Delta source rocks was carried out. This was done to evaluate the significant of diamondoids in petroleum exploration in the basin. Pulverized rock samples selected from four Niger Delta oil wells, were extracted with Soxhlet extraction technique. The biomarkers content of saturated hydrocarbons fraction was assayed by gas chromatography-mass spectrometry (GC-MS) while the diamondoids content was analyzed using GC-MS-MS. The distribution of saturated hydrocarbons; n-alkanes, pristane, pyhtane, steranes, and terpanes revealed that samples from well AW were sourced from mixed terrestrial/marine organic matter while samples from wells OP, GB, and OT were sourced largely from terrestrial organic matter origin. The Pr/Ph ratio values indicated that the organic matter of wells AW and OP samples were deposited under suboxic conditions while those of wells GB and OT were deposited under anoxic conditions. Hopane and sterane thermal maturity geochemical parameters showed that the organic matter in source rocks from the four wells are thermally mature. Diamondoids source parameters indicated that well AW source rock samples had mixed marine/terrestrial organic matter input, while samples from wells OP, GB, OT were sourced from terrestrial organic matter, which is in perfect agreement with the results of other source geochemical parameters, thus indicating that diamondoids are good tools in determining the origin of petroleum. Diamondoid maturity parameters showed that all the samples from the four wells are thermally mature with maturity level ranging from early to main oil window. This study revealed that diamondoids can be used to evaluate petroleum occurrence in the study area or any other sedimentary basins.

Down-regulation of FTX promotes the differentiation of osteoclasts in osteoporosis through the Notch1 signaling pathway by targeting miR-137

BackgroundOsteoporosis (OP) is one of the commonly seen bone diseases with low bone mineral densities and trauma fractures. Accumulative studies have demonstrated that the occurrence of OP is closely related to osteoclasts differentiation. LncRNA FTX has been demonstrated to inhibit the development of some human cancers. However, its potential functions in human OP remains to be elusive.MethodsThe expressions of FTX and miR-137 in bone and serum samples of patients with or without OP were measured. Bioinformatics analysis, RIP assays and luciferase reporter assays were performed to examine the upstream and downstream transactional factors of miR-137. Functional assays were conducted to check the roles of the Notching1 signaling pathway OP.ResultsFTX was suppressed in OP samples and serums, however, miR-137 was greatly elevated. FTX reduced osteoclast-genesis and inhibited osteogenic differentiation by targeting miR-137. This also inhibited the Notch1 signaling pathway.ConclusionOur experiments and results pointed out that lncRNA FTX up-regulated miR-137 in OP through the Notch1 signaling pathway.

Circulating fractures-related microRNAs distinguish primary hyperparathyroidism-related from estrogen withdrawal-related osteoporosis in postmenopausal osteoporotic women: A pilot study.

Primary hyperparathyroidism (PHPT) represents a common cause of secondary osteoporosis in postmenopausal women, where the negative effect of estrogen withdrawal and that of hyperparathyroidism on bone mineralization coexist. Circulating microRNAs (miRNAs) expression profile has been correlated to both osteoporosis and fragility fractures. The study aimed to profile a set of miRNAs associated with osteoporotic fractures, namely miR-21-5p, miR-23a-5p, miR-24-2-5p, miR-24-3p, miR-93-5p, miR-100-5p, miR-122-5p, miR-124-3p, miR-125b-5p and miR-148-3p, in the plasma of 20 postmenopausal PHPT women. PHPT miRNAs profiles were compared with those detected in 10 age-matched postmenopausal non-PHPT osteoporotic women (OP). All the 10 miRNAs were detected in the plasma samples of both PHPT and OP women. The miRNA profiles clearly distinguished PHPT from OP samples, and identified within the PHPT group, two clusters differing for the PHPT severity, in term of ionized calcium and bone mineralization. In particular, miR-93-5p was significantly downregulated in PHPT samples, while miR-24-3p negatively correlated with the T-score at lumbar, femur neck and total hip sites. PHPT women who experienced osteoporotic fractures had plasma miR-24-3p levels higher than those detected in unfractured PHPT women. In conclusion, PHPT may modulate circulating fractures-related miRNAs, in particular, miR-93-5p, which may distinguish estrogen-related from PHPT-related osteoporosis.

Proteomic profiling analysis of postmenopausal osteoporosis and osteopenia identifies potential proteins associated with low bone mineral density.

Postmenopausal osteoporosis (PMOP) is a major global public health concern and older women are more susceptible to experiencing fragility fractures. Our study investigated the associations between circulating proteins with bone mineral density (BMD) in postmenopausal women with or without low BMD (osteoporosis and osteopenia) using a tandem mass tag (TMT) labeling proteomic experiment and parallel reaction monitoring testing. Across all plasma samples, we quantitatively measured 1,092 proteins, and the OP and normal control (NC) samples were differentiated by principal component analysis and a partial least squares-discrimination analysis model based on the protein profiling data. The differentially abundant proteins between the low BMD and NC samples mostly exhibited binding, molecular function regulator, transporter and molecular transducer activity, and were involved in metabolic and cellular processes, stimulus response, biological regulation, immune system processes and so forth. TMT analysis and RRM validation indicated that the expression of protein Lysozyme C (P61626) was negatively related to BMD, while the expression of proteins Glucosidase (A0A024R592) and Protein disulfideisomerase A5 (Q14554) was positively related to BMD values. Collectively, our results suggest that postmenopausal women with low BMD have a different proteomic profile or signature. Protein alterations may play an important role in the pathogenesis of PMOP, and they may act as novel biomarkers and targets of therapeutic agents for this disease.

Expression profile analysis of long non-coding RNA in skeletal muscle of osteoporosis by microarray and bioinformatics

BackgroundOsteoporosis (OP) is a condition featured by bone mass loss and bone tissue microarchitectural alterations due to impaired tissue homeostasis favoring excessive bone resorption versus deposition. The trigger of such an impairment and the downstream molecular pathways involved are yet to be clarified. Long non-coding RNA (lncRNA) plays a role in gene transcription, protein expression and epigenetic regulation; and altered expression results in immune or metabolism related desease development. To determine whether lncRNAs are involved in osteoporosis, we analyzed the expression profile of lncRNAs and mRNAs in osteoporosis.MethodThree pairs of osteoporosis patients (OP group) and healthy people controls (NC group) were screened by microarray. Quantitative polymerase chain reaction (qRT-PCR) was performed to confirm dysregulated lncRNA expressions in 5 pairs of OP and NC group tissues samples. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed to construct the lncRNA-mRNA co-expression network.ResultThrough co-expression analysis, differently expressed transcripts were divided into modules, and lncRNAs were functionally annotated. We further analyzed the clinical significance of crucial lncRNAs from modules in public data. Finally, the expression of five lncRNAs, CUST_44695_PI430048170-GeneSymbol:CTA-384D8.35;CUST_39447_PI430048170,CUST_73298_PI430048170,CUST_108340_PI430048170,CUST_118927_PI430048170,this four lncRNAs have not been annotation genes and have not found GeneSymbols, and by quantitative RT-PCR, which may be associated with osteoporosis patients’ overall survival.ConclusionAnalysis of this study revealed that dysregulated lncRNAs and mRNAs in osteoporosis patients and health people controls could affect the immune or metabolism system and musculoskeletal cell differentiation. The biological functions of those lncRNAs need to be further validated.

Impact of enzymatic digestion on bacterial community composition in CF airway samples.

BackgroundPrevious studies have demonstrated the importance of DNA extraction methods for molecular detection of Staphylococcus, an important bacterial group in cystic fibrosis (CF). We sought to evaluate the effect of enzymatic digestion (EnzD) prior to DNA extraction on bacterial communities identified in sputum and oropharyngeal swab (OP) samples from patients with CF.MethodsDNA from 81 samples (39 sputum and 42 OP) collected from 63 patients with CF was extracted in duplicate with and without EnzD. Bacterial communities were determined by rRNA gene sequencing, and measures of alpha and beta diversity were calculated. Principal Coordinate Analysis (PCoA) was used to assess differences at the community level and Wilcoxon Signed Rank tests were used to compare relative abundance (RA) of individual genera for paired samples with and without EnzD.ResultsShannon Diversity Index (alpha-diversity) decreased in sputum and OP samples with the use of EnzD. Larger shifts in community composition were observed for OP samples (beta-diversity, measured by Morisita-Horn), whereas less change in communities was observed for sputum samples. The use of EnzD with OP swabs resulted in significant increase in RA for the genera Gemella (p < 0.01), Streptococcus (p < 0.01), and Rothia (p < 0.01). Staphylococcus (p < 0.01) was the only genus with a significant increase in RA from sputum, whereas the following genera decreased in RA with EnzD: Veillonella (p < 0.01), Granulicatella (p < 0.01), Prevotella (p < 0.01), and Gemella (p = 0.02). In OP samples, higher RA of Gram-positive taxa was associated with larger changes in microbial community composition.DiscussionWe show that the application of EnzD to CF airway samples, particularly OP swabs, results in differences in microbial communities detected by sequencing. Use of EnzD can result in large changes in bacterial community composition, and is particularly useful for detection of Staphylococcus in CF OP samples. The enhanced identification of Staphylococcus aureus is a strong indication to utilize EnzD in studies that use OP swabs to monitor CF airway communities.

Phenotypic and Molecular Characterization of ESBL sproducing Enterobacteriaceaein A Tertiary Care Hospital

Background :There is an alarming magnitude of antibiotic resistance, production of Extended-Spectrum βLactamases (ESBLs) is a significant resistance-mechanism among Gram Negative bacteria posing challenge to the most coveted wellbeing of man. The Present study was undertaken to detect the prevalence of ESBLs producers, their pedantic antibiogram, and their genes, bla CTX-M, bla TEM &bla SHV by Multiplex PCR. Methodology:In this prospective study, 240 non repetitive Isolates of Enterobacteriaceae from various samples of different departments of Gandhi Hospital were processed for the presence of ESBL by Phenotypic screening, Jarlier DDST, Phenotypic confirmatory test (CLSI guidelines),Vitek2 System, Multiplex PCR for Molecular characterization over a period of 11⁄2 years in the Department of Microbiology Gandhi Medical College and Hospital,Secunderabad,Telangana. Results: Out 0f 240 Gram negative isolates 35.8% were phenotypically confirmed ESBLs producers. OP samples yielded 49/86(56.98%), whereas IP 37/86 (43.02%)(P value 0.0327 statistically significant).Medical and Surgical ICUs yielded 50%, Predominant organism isolated was E.coli 61.62%. All the isolates were 100% resistant to 3 rd generation Cephalosporins, 100% Sensitive to Carbapenems, Genotypic characterization was detected in 78 Isolates. Single gene was found in 73.08%. Single Predominant gene was blaCTX-M 71.9%, commonest multiple genes combination was CTX-M&SHV12.82%. Conclusion:Our study confirms global trend of resistance to beta-lactam antibiotics. ESBL strains are usually multi-drug resistant.An appropriate and judicious antibiotic use may lead to withdrawal of the selective pressure.

Visible-light photocatalytic oxidation of CO over plasmonic Au/TiO2: Unusual features of oxygen plasma activation

To seek an efficient activation of plasmonic Au/TiO2 photocatalysts, atmospheric-pressure cold plasmas of oxygen (OP) and argon (ArP) were employed to activate the Au/TiO2 coating samples on glass substrate and compared with the conventionally calcination. The activated samples were evaluated in a continuous-flow photocatalytic oxidation (PCO) reactor under visible light (λ>420nm) for CO removal from synthetic air and characterized by transmission electron microscopy (TEM), X-ray photoelectron spectroscopy (XPS), UV–vis spectroscopy, CO chemisorption and electron paramagnetic resonance (EPR). Although Au nanoparticles (NPs) of the three activation samples averaged at around 4nm by TEM, the OP and ArP samples exhibited the highest and lowest PCO activity, respectively. An unusual feature of oxygen plasma activation is high content of surface oxygen, which favors superoxide (O2−) formation by accepting hot electron generated from absorption of visible light through local surface plasmon resonance (LSPR) of Au NPs. The OP sample has the lowest metallic Au content but its cationic Au can be rapidly reduced to form numerous low-coordinated metallic Au around the interface between Au NPs and TiO2 support in the induction period, which is another unusual feature of oxygen plasma activation.

Highly hydrothermally stable FePO4–SBA-15 synthesized using a novel one-pot hydrothermal method

The hydrothermal stability of FePO4–SBA-15 synthesized using a novel one-pot hydrothermal method (OP) was systematically investigated using two methods: treatment with pure steam at 800 °C or with boiling water at 100 °C. The structural changes in the samples were monitored using small angle X-ray diffraction and N2-physisorption methods. It was found that the hydrothermal stabilities of OP samples remained high and showed little difference over the FePO4-doping range 5–40 wt%. These results differ from previous reports that the loading of heterogeneous metal atoms significantly influences the hydrothermal stability of the host ordered mesoporous material. For comparison, the hydrothermal stabilities of FePO4–SBA-15 synthesized using an impregnation method (IMP) and commercially obtained SBA-15 were also studied. The order of the sample hydrothermal stabilities was OP > IMP >> SBA-15. The formed FePO4 protective layers helped to prevent mesostructure degradation during hydrothermal treatment, therefore modified samples showed superior hydrothermal stabilities compared with pure SBA-15. The superior performance of OP samples over IMP samples is mainly attributed to the formation of stable Si–O–Fe bonds and more micropores in OP samples.

Hyperglycosylated human chorionic gonadotropin as an early predictor of pregnancy outcomes after in vitro fertilization

To determine whether serum hyperglycosylated human chorionic gonadotropin (hhCG) measured as early as 9 days after egg retrieval can predict ongoing pregnancies after in vitro fertilization and fresh embryo transfer (IVF-ET). Cohort Academic assisted reproduction center. Consecutive patients undergoing IVF-ET INTERVENTION(S): Serum hhCG and hCG levels measured 9 (D9) and 16 (D16) days after egg retrieval Ongoing pregnancy beyond 9 weeks of gestation. Ongoing pregnancy (62 of 112 participants) was associated with higher D9 levels of hhCG and hCG. However, hhCG was detectable in all D9 OP samples, while hCG was detectable in only 22%. A D9 hhCG level of >110 pg/mL was 96% specific for an ongoing pregnancy, yielding a positive predictive value of 94%. Compared with the D9 hCG levels, hhCG was more sensitive and had a larger area under the curve (0.87 vs. 0.67, respectively). The diagnostic test characteristics were similar between the D16 hhCG and hCG levels. In patients undergoing assisted reproduction, a test to detect pregnancy early and predict outcomes is highly desirable, and hhCG is detectable in serum 9 days after egg retrieval IVF-ET cycles. In this early assessment, hhCG was superior to traditional hCG and highly predictive of ongoing pregnancies.

Highly acetylated pectin from cacao pod husks (Theobroma cacao L.) forms gel

A pectin (OP) obtained from cacao pod husk with a high acetyl content, which is a structural feature that could disturb the pectins' gel formation, was able to form gels at low pH and a high sucrose content. Pectin gels (1.32% GalA equivalent, w/w) were prepared at pH 2.5–3.3 in the presence of 60% sucrose (w/w). Rheological analyses were performed to determine the optimal pH for further studies. Next, the OP samples were prepared at pH 2.7 in concentrations ranging from 0.33 to 1.98% GalA (w/w) with 60% sucrose (w/w) and subjected to rheological analysis. Dynamic oscillatory experiments at 25 °C indicated the presence of gels for all of the analysed concentrations. Measurements of the elastic (G′) and viscous (G″) moduli at 25 °C also indicated that increasing the pectin concentration resulted in stronger gels. Rotational experiments revealed a shear-thinning behaviour in which the apparent viscosities of the samples increased as the concentration increased. Although the OP had a high degree of acetylation, this pectin was able to form gels, which suggests its potential for use as a gelling and thickening additive.

&amp;lt;i&amp;gt;Streptococcus pneumoniae&amp;lt;/i&amp;gt; Upper Respiratory Carriage in Costa Rican Children with Otitis Media before the Introduction of the Heptavalent Conjugated Vaccine in the National Immunization Program

Objective: The aim of this study was to analyze the NP/OP S. pneumoniae serotype distribution and potential vaccine coverage in Costa Rican children with Otitis Media (OM) before the introduction of PCV-7 in the National Immunization Program (NIP). Methods: Between 2002 and 2006, NP and OP samples were obtained from 641 children from 6 to 79 months of age, at the time of OM diagnosis. S. pneumoniae serotyping and antimicrobial susceptibility were performed. Results: 386 S. pneumoniae isolates were recovered. The most common S. pneumoniae serotypes (ST) were: ST 6B, ST 14, ST 19F. Penicillin non-susceptibility was observed among 57% of the isolates obtained from children Conclusions: S. pneumoniae was isolated from the NP and/or OP in the majority (59%) of studied children with OM. At a statistical significant level, only serotype 3 was more frequently isolated among children >24 months of age. Antibiotic non-susceptibility and MDR were significantly higher in children