The interlayer hybridization (IH) of van der Waals (vdW) materials is thought to be mostly associated with the unignorable interlayer overlaps of wavefunctions (t) in real space. Here, we develop a more fundamental understanding of IH by introducing a new physical quantity, the IH admixture ratio α. Consequently, an exotic strategy of IH engineering in energy space can be proposed, i.e., instead of changing t as commonly used, α can be effectively tuned in energy space by changing the on-site energy difference (2Δ) between neighboring-layer states. In practice, this is feasible via reshaping the electrostatic potential of the surface by deposing a dipolar overlayer, e.g., crystalline ice. Our first-principles calculations unveil that IH engineering via adjusting 2Δ can greatly tune interlayer optical transitions in transition-metal dichalcogenide bilayers, switch different types of Dirac surface states in Bi2Se3 thin films, and control magnetic phase transition of charge density waves in 1H/1T-TaS2 bilayers, opening new opportunities to govern the fundamental optoelectronic, topological, and magnetic properties of vdW systems beyond the traditional interlayer distance or twisting engineering.