IntroductionY‐chromosomal loci are genetically responsible for some male‐specific biological processes. The sex determining region Y (SRY), a protein with DNA‐binding activity, is known as the trigger for sex differentiation in mammals. In humans the SRY is encoded by a single exon located on the short arm of the Y chromosome, close to the pseudoautosomal boundary (S inclair et al. 1990). Moreover, the Y chromosome harbours the male‐specific histocompatibility antigen (reviewed by S impson et al. 1997) and there are at least two regions of the Y chromosome, which have been shown to be essential for normal spermatogenesis in mice (E lliott and C ooke 1997).The sexual dimorphism of aggression in mice has led to a search for its foundation on the Y chromosome. The existence of Y‐chromosomal genetic variation for aggressiveness with genetic factors borne both on the pseudoautosomal (YPAR) and on the nonpseudoautosomal (YNPAR) region of the Y chromosome (S luyter et al. 1996) has been shown. Another example for Y‐induced genetic variation in mice is the testis autosomal trait (occurrence of ovaries or ovotestes in XY animals), which is observed when specific Y chromosomes interact with the autosomal background of certain laboratory mouse lines (E isner et al. 1996). A comparison of the resemblance of different types of relatives indicated a nonzero Y‐chromosomal variance for body weight in mice (B& uuml; nger et al. 1995).In cattle the Y chromosomes of the Bos taurus and Bos indicus subspecies can be morphologically distinguished: its shape is submetacentric in B. taurus and acrocentric in B.indicus. This difference is caused by a pericentric inversion (G oldammer et al. 1997) and has frequently been used to investigate the introgression of zebu genes into B. taurus breeds.The polymorphism of the bovine Y chromosome itself and the results of mouse research both direct the scientific curiosity on the possible contribution of the bovine Y chromosome to quantitative genetic variation in cattle, a question which, to the authors’ knowledge, has not been investigated before. In this paper we first discuss the contribution of autosomal, imprinted, and sex‐linked genes to the resemblance of full and half sibs and then present a Bayesian estimation of a Y‐chromosomal variance component for each of four beef traits in young Simmental bulls using mixed linear and threshold models.
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