The use of 234Th–238U disequilibrium has been widely employed to estimate the sinking flux of particulate organic carbon (POC) from the upper sea and ocean. Here, the deficits of 234Th relative to 238U in the water column and the carbon isotope signature (δ13C) of POC in the East China Sea (ECS) Shelf were measured, which was used to distinguish the fraction of marine and terrestrial POC export fluxes. In the ECS Shelf, very strong deficits of 234Th relative to 238U were observed throughout the water column, with 234Th/238U activity ratios ranging from 0.158 ± 0.045 to 0.904 ± 0.068 (averaging 0.426 ± 0.159). The residence times of particle reactive radionuclide 234Th (τTh–T) in the ECS shelf water varied between 9 and 44 days, which is significantly shorter than that in the continental slope area or the basin area. This phenomenon indicates that there is a more rapid particle scavenging process in the ECS shelf water compared to the continental slope and basin upper water. By applying a two-end-member mixing model based on the δ13C, the fraction of terrestrial POC was estimated to be 0 to 74% (mean: 30 ± 22%) and the fraction of marine POC was in the range of 25% to 100% (mean: 70 ± 22%). Fluxes of marine and terrestrial POC settling to the seafloor exhibited significant spatial differences among different stations, ranging from 11 to 129 mmol C/m2/day and from 2.6 to 38 mmol C/m2/day, respectively. The averaged terrestrial POC fluxes in the southern and northern ECS Shelf were similar (~ 21 to 24 mmol C/m2/day), while the marine POC fluxes in the north (86 ± 37 mmol C/m2/day) were approximately four times higher than those in the south (26 ± 20 mmol C/m2/day). Interestingly, the estimated export flux of both marine and terrestrial POC were approximately one order of magnitude higher than the previously reported burial fluxes of POC (ranging from 1.1 ± 0.1 to 11.4 ± 1.1 mmol C/m2/day) in the underlying bottom sediments, indicating that the majority (> 90%) of both terrestrial and marine POC exported from the upper water column are degraded in the sediments of the ECS Shelf. This “carbon missing” phenomenon can greatly be attributed to rapid decomposition by other processes (including microbial reworking, cross-shelf transport, and possible consumption by benthic organisms). Our findings highlight the dynamic nature of carbon cycling in the continental shelf and the need for further research to understand these processes and improve carbon budget assessments.
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