Nitrogen Fixation In Sediments Research Articles

Comparing the effects of algae and macrophyte residues' degradation on biological nitrogen fixation in freshwater lake sediments

The degradation and mineralization of organic residues are important factors that drive biochemical processes in lake ecosystems. However, the effect of organic matter's degradation on biological nitrogen fixation (BNF) in freshwater lake sediments remains poorly understood. This study investigated the response of sediment nitrogen fixation to the degradations of algae and macrophyte residues through continuous flow mesocosms combined with nifH sequencing analysis and isotope tracing. The results suggested that the active nitrogen fixation of sediments only occurred in the first two weeks of the rapid degradation of organic residues. Degradation of algae and macrophytes residues quickly increased the nifH abundance and the nitrogenase activity (NA) in sediments; however, the maximum NA triggered by algae's degradation (658.2 ± 16.8 ng g−1 day−1) was six times higher than that induced by the degradation of macrophytes residues. There was no significant difference in NA of sediments with the degradation of Potamogeton and Phragmites. Redundancy analysis (RDA) showed that the variation of diazotrophic community in sediment was significantly (p < 0.01) correlated with the concentrations of SO42− and NH4+ in overlying water and the Fe(II) content and Eh in sediment. Overall, the BNF of sediments can quickly respond to the degradation of organic residues, and the degradation of algae has a stronger promoting effect on the nitrogen fixation in sediments than that of macrophyte residues.

Biological Nitrogen Fixation in Sediments of a Cyanobacterial Bloom‐Occurring Bay in One Eutrophic Shallow Lake: Occurrence and Related Environmental Factors

AbstractBiological nitrogen fixation (BNF) is an important source of bioavailable nitrogen in the aquatic environment that supports primary production. However, little is known about its occurrence and potential in eutrophic freshwater habitats. This study investigated the diazotrophic diversity and seasonal variation of nitrogenase activity (NA) in the sediments of a cyanobacterial bloom‐occurring bay of a freshwater lake. Sequencing analysis of the nifH gene revealed that diazotrophs in Clusters I and III constituted the dominant components of the diazotrophic community in Meiliang Bay. Both nifH and 16S rRNA gene sequencing indicated that the microbes in sediments have different community structures during the winter than during other seasons. The concentrations of dissolved sulfide, sulfate, and nitrate in pore water were significantly correlated with NA in sediments; however, the Mantel test indicated that dissolved sulfide had a more significant effect on the structure of the diazotrophic community than did other environmental factors. Laboratory culture experiments under different redox conditions further confirmed the inhibitory effect of dissolved sulfide on BNF in sediments. This study revealed that the BNF in sediments of Meiliang Bay was closely linked to variations in dissolved sulfide concentration, which has broadened our understanding of BNF in freshwater lakes.

Widespread nitrogen fixation in sediments from diverse deep-sea sites of elevated carbon loading.

Nitrogen fixation, the biological conversion of N2 to NH3 , is critical to alleviating nitrogen limitation in many marine ecosystems. To date, few measurements exist of N2 fixation in deep-sea sediments. Here, we conducted > 400 bottle incubations with sediments from methane seeps, whale falls and background sites off the western coast of the United States from 600 to 2893 m water depth to investigate the potential rates, spatial distribution and biological mediators of benthic N2 fixation. We found that N2 fixation was widespread, yet heterogeneously distributed with sediment depth at all sites. In some locations, rates exceeded previous measurements by > 10×, and provided up to 30% of the community anabolic growth requirement for nitrogen. Diazotrophic activity appeared to be inhibited by pore water ammonium: N2 fixation was only observed if incubation ammonium concentrations were ≤ 25 μM, and experimental additions of ammonium reduced diazotrophy. In seep sediments, N2 fixation was dependent on CH4 and coincident with sulphate reduction, consistent with previous work showing diazotrophy by microorganisms mediating sulphate-coupled methane oxidation. However, the pattern of diazotrophy was different in whale-fall and associated reference sediments, where it was largely unaffected by CH4 , suggesting catabolically different diazotrophs at these sites.

Nitrogen fixation in sediments along a depth transect through the Peruvian oxygen minimum zone

Abstract. The potential coupling of nitrogen (N2) fixation and sulfate reduction (SR) was explored in sediments of the Peruvian oxygen minimum zone (OMZ). Sediment samples were retrieved by a multiple corer at six stations along a depth transect (70–1025 m water depth) at 12° S, covering anoxic and hypoxic bottom water conditions. Benthic N2 fixation, determined by the acetylene reduction assay, was detected at all sites, with highest rates between 70 and 253 m and lower rates at greater depth. SR rates decreased with increasing water depth. N2 fixation and SR overlapped in sediments, suggesting a potential coupling of both processes. However, a weak positive correlation of their activity distribution was detected by principle component analysis. A potential link between N2 fixation and sulfate-reducing bacteria was indicated by the molecular analysis of nifH genes. Detected nifH sequences clustered with the sulfate-reducing bacteria Desulfonema limicola at the 253 m station. However, nifH sequences of other stations clustered with uncultured organisms, Gammaproteobacteria, and Firmicutes (Clostridia) rather than with known sulfate reducers. The principle component analysis revealed that benthic N2 fixation in the Peruvian OMZ is controlled by organic matter (positive) and free sulfide (negative). No correlation was found between N2 fixation and ammonium concentrations (even at levels &gt; 2022 µM). N2 fixation rates in the Peruvian OMZ sediments were in the same range as those measured in other organic-rich sediments.

Potential salinity limitations on nitrogen fixation in sediments from Mono Lake, California

Mono Lake is a hypersaline alkaline lake in the high altitude Great Basin desert of eastern California. Algal productivity of the lake is nitrogen-limited, and a contributing source is derived from benthic nitrogen fixation. Lake level and salinity have fluctuated with natural climatic variations but have also been affected by the diversion of tributary streams. This research examines the influence of varied salinity and lake level on the potential for benthic nitrogen fixation in Mono Lake. A sediment-surface microbial mat community was exposed directly, and in acclimated cultures, to a range of Mono Lake salinities under anaerobic incubations and the activity of nitrogenase assayed by acetylene reduction. Activity was stimulated in light, but also occurred in darkness. Over an experimental salinity range from 50 to 150 g L-1 TDS, nitrogenase activity was reduced by 90 per crnt, with the activity persisting at the highest salinity being attributable to dark fixation alone. Between a salinity of 50 g L-1, occurring in Mono Lake over 50 years ago, and 100 g L-1, nitrogenase activity was reduced by nearly half. Changes in the area of the littoral zone at varied lake levels also affect the total amount of potential benthic nitrogen fixation in the lake. An accounting of yearly inputs of nitrogen to Mono Lake suggests N2-fixation could contribute as much as 76–81 percent of the total. Inhibition of nitrogen fixation rates by increased salinity could limit the long-term nutrient supply and benthic primary productivity of this ecosystem.

Nitrogen fixation in freshwater, estuarine, and marine ecosystems. 2. Biogeochemical controls1

Planktonic nitrogen fixation in lakes is strongly related to lake trophic status, with moderate and high rates usually occurring only in eutrophic lakes. Among eutrophic lakes, nitrogen fixation is related to the ratio of nitrogen loading to phosphorus loading to the lake; significant nitrogen fixation by planktonic organisms generally occurs only when the N: P ratio of the nutrient loading is near or below the Redfield ratio of 16: 1. In contrast, nitrogen fixation by planktonic organisms is generally low in estuaries even when the N: P ratio of nutrients inputs is low.The tendency toward less nitrogen fixation by plankton in estuaries and coastal marine ecosystems than in lakes subject to similar loadings of nitrogen and phosphorus may be due to a lower availability in oxic seawater of one or more trace elements required for nitrogen fixation, such as molybdenum and iron. Iron concentrations are generally lower in estuarine waters and seawater than in most lakes. And although molybdenum concentrations in seawater are actually higher than in lakes, molybdenum availability is probably lower, since sulfate inhibits molybdate assimilation by microbes. Molybdate is the primary form of molybdenum in oxic seawater, and the ratio of sulfate: molybdate is greater than in lakes. However, even in lakes sulfate is several orders of magnitude more abundant than molybdenum, and the ratio of dissolved sulfate to dissolved molybdenum typically is much greater than the ratio of sulfur to molybdenum apparently required by nitrogen‐fixing cyanobacteria. Consequently, assimilation of molybdate by cyanobacteria is probably an energetically expensive process in all natural waters, but more so in seawater than in freshwaters. High concentrations of dissolved organic matter are known to favor blooms of cyanobacteria, perhaps by increasing iron and/or molybdenum availability through chelation.The primary controls on nitrogen fixation in sediments, wetlands, macrophyte beds, and cyanobacterial mats may be different from those for fixation by planktonic organisms. Both molybdenum and iron are probably more available in these systems than in oxic waters, since reducing conditions and high DOC concentrations will increase iron solubility and favor the stability of reduced forms of molybdenum; sulfate should not inhibit the assimilation of these reduced molybdenum compounds. Consequently, nitrogenase synthesis (and, therefore, nitrogen fixation) in wetlands and in sediments may be less energetically expensive than in oxic water columns. A major control on nitrogen fixation in sediments may be repression of nitrogenase synthesis by high concentrations of ammonium, a factor less important to planktonic fixation because of the much lower concentrations of ammonium generally found in water columns than in sediments.

Nitrogen Fixation in the Sediment of Shallow Lake Balaton, a Reservoir and Fishponds

AbstractFor the in situ measurement of nitrogen fixation in lake sediments, we developed a method which assures the rapid saturation with acetylene of the whole enzyme pool in the sediment and maintains near intact physical, chemical and biological environment at the water‐sediment interface. On the basis of seasonal measurements, the annual nitrogen fixation in the sediment was estimated in four types of shallow water ecosystem: the Keszthely Basin, Lake Balaton: 4.7 g N m−2; Körös backwater reservoir: 6.5 g N m−2; a polycultural fishpond: 0.49 g N m−2; and a liquid manure oxidation fishpond: 0.61 g N m−2. The amount of nitrogen fixed in the sediment of the Keszthely Basin was close to the fixation in the water column, while that fixed in the sediment of Körös backwater reservoir was considerably greater.A multiple regression analysis was made on the basis of synoptic studies on the vertical distribution of nitrogen fixation in the sediment, the pH, Eh, and concentrations of organic N, NH4‐N, NO3‐N, and NO2‐N in the interstitial water. The results indicate that nitrogen fixation is related to the dep, the NH4‐N concentration, and the redox potential. The vertical distribution of nitrogen fixation cannot be explained in every case by the densities and distributional patterns of the Azotobacter and Clostridium populations. No correlation was observed between nitrogen fixation and total organic‐C in lake sediment. A surprisingly close correlation was found between plankton primary production and the sedimentary nitrogen fixation in these lakes (r = 0.85, y = 4.5 X0.85). Short‐term (4 h) in vitro studies revealed a glucose mediated increase of nitrogen fixation, but there was no NH4‐N inhibition detected during this short incubation period.

The Loch Eil project: The bacterial flora and heterotrophic nitrogen fixation in sediments of Loch Eil

The organically enriched sediments of Loch Eil reduced acetylene (fixed nitrogen) at a higher rate than sediments in the Firth of Lome and other near shore marine locations. Sulphate-reducing bacteria (SRB) were implicated in nitrogen fixation although fixation rates did not correlate with the SRB numbers found in these sediments. The data suggest that a negative relationship may exist between nitrogen fixation and the sulphide content of sediments.

霞ケ浦における生物的窒素固定と脱窒

The biological nitrogen fixation and denitrification were studied in Lake Kasumiga-ura to evaluate the significance of the biological processes for nitrogen enrichment and the self-purification in aquatic environments. The water and sediment samples were collected from several sites and analyzed for the amount of inorganic nitrogen, the nitrogen-fixing activity by acetylene reduction method, the denitrifying activity by nitrous oxide formation and the numbers of total heterotrophic bacteria and denitrifying bacteria. No significant activities of nitrogen fixation and denitrification were found in the lake water in this study. The rate of denitrification in sediments was about two orders of magnitude higher than that of nitrogen fixation. The average microbial activities of nitrogen fixation in sediments sampled in July, August and December were 0.02, 0.11, and 0.14 μg N/g/day, respectively ; those of denitrification are 4.1, 8.1, 93.4 μg N/g/day, respectively. These results suggest that the surface sediments in Lake Kasumiga-ura have a high potential for self-purification of nitrogenous compounds in water and sediments.

Nitrogen fixation in the Rhode River estuary of Chesapeake Bay.

The distribution, seasonal variation, origin, and significance of biological nitrogen fixation has been determined for a Chesapeake Bay estuary using the acetylene reduction technique. Studies over a 15-month period have shown that nitrogen fixation occurs predominantly in the surface intertidal (marsh) and subtidal sediments. Negligible activity was found in surface waters. A marked seasonal variation in nitrogen fixation was observed for intertidal sediments incubated at a standard 20 degrees C. Average rates of about 37 and 12 ng N/g dry sediment per hour were observed in the late fall months of 1972 and 1973, respectively, and less than or equal to 5 ng N/g dry sediment per hour during other seaons. Peaks of activity were lowered considerably when samples were incubated at ambient temperatures (in situ). Activity in the subtidal sediments was low (less than or equal to 6.8 ng N/g dry sediment per hour but showed a similar (approximately twofold) seasonal variation in nitrogen fixation potential. Light-dark and substrate addition experiments suggest that heterotrophic bacteria are the principal agents for nitrogen fixation in sediments. Integrated estimates of nitrogen fixation in the estuary indicate that biological fixation probably accounts for less than 5% of the total influx of nitrogen into the system. Rates of activity in the intertidal sediments are insufficient to account for the high productivity of marine angiosperms found in the marsh.