Neotropical Countries Research Articles

An overview on the production, management and impact of microplastic contamination on marine species and marine environments: A review

The purpose of this paper is to review and evaluate published literature on the production, management and impact of microplastic contamination on marine species and marine environments. A systematic method was utilized to access research works of literature on “production, management and impact of microplastic contamination on marine species and marine environments”. A total of Sixty-two (62) research papers published between the years 1972 to 2022 was accumulated and used for this review. A subjective approach was used to select the topics: production, management and impact of microplastic contamination. In this paper, four (4) effects of microplastics on organisms and the environment was assessed. Additionally, the formation and classification of microplastics were evaluated. Subsequently, the paper delves into the production and the management of global plastic production as well as the sources of contamination. Further, this review assessed the quantity of microplastics in the gastrointestinal tract and edible muscles of various fish species. A mini checklist of sixty-one (61) fish species from thirty (30) families dwelling in nine (9) different marine habitats, all contaminated by microplastics was also presented in this review. Moreover, possible solutions to overcome the impact of microplastics on organisms and aquatic environments were also mentioned in this article. The published works of literature established that the global plastic production is constantly increasing with a growing world population thus leading to mismanagement of plastic resources and introducing them to the environment. Microplastics can cause serious complications in humans, marine organisms such as fishes, crustaceans, marine mammals and sea birds and even contribute to the degradation of mangrove forests and the coastal environment. This review highlights the fact that more extensive studies on the impact of microplastic contamination in organisms and the environment should be done in neotropical countries since there is a dearth and gaps of such information on research and published data in these biodiversity rich regions.

A A new species of Graffenrieda (Melastomataceae) from the northern Andes, Caquetá, Colombia, and a key for the Graffenrieda group with calyptrate flowers

Background and Aims: Graffenrieda is a Neotropical genus with more than 70 species, mainly distributed in the Guiana Shield and the Andes. This work describes a new species of Graffenrieda and provides a key to identify all species with calyptrate flowers in the genus.Methods: The description of this new species was made from collections deposited in the Colombian herbaria JBB and COAH. Measurements of vegetative parts and inflorescence were made from dried material, while floral structures and fruits were measured from fresh material preserved in alcohol. Their conservation status was assessed according to IUCN guidelines. A key for the recognition of all species of the genus with calyptrate flowers, including the new species and Centronia species to be transferred to Graffenrieda is also provided here, for which lists of species in Neotropical countries, collection databases, and literature on both genera were consulted.Key results: Graffenrieda cardenasii sp. nov. is endemic to the southern Cordillera Oriental of Colombia and is characterized by its indumentum of irregular lepidote trichomes on the vegetative parts, leaves with incomplete lateral anisophylly, leafy bracteoles as large as the flower buds, 5-merous flowers, calyptrate calyx and 2-locular ovary. It is categorized as Endangered in view of its endemicity and habitat specificity. A key is provided for 30 species of the genus Graffenrieda that share the character of calyptrate flowers.Conclusions: This species is named in honor of the Colombian botanist Dairon Cárdenas López, a great collector and connoisseur of the Colombian Amazonian flora. It is so far known only from the type localities. The key to the species with calyptrate flowers included in this article allows 43% of the species in the genus Graffenrieda to be recognized, including four Centronia species.

Integrative description and histopathological lesions of Cyathostoma americana (Nematoda, Syngamidae) parasitizing a barn owl (Tyto alba) in Chile.

Syngamid worms (Nematoda: Syngamidae) parasitizing birds of prey are considered cosmopolitan, but the efforts to understand their biology and systematics are restricted to the Holarctic region. However, in the Neotropical region there is only one recent record with no data about its molecular characterization or its significance to the health of its hosts. Thus, this study aimed to identify through an integrative approach the Syngamid worms parasitizing a native owl, and to describe its pathological consequences. A total of 14 barn owls (Tyto alba) were dissected between 2015 and 2021, from which one bird was found to be parasitized by a high parasitic burden (i.e. 185 worms). Considering light microscopy and SEM, these nematodes were morphologically identified as Cyathostoma americana, and then supported through molecular analyses of nuclear loci ITS and LSU. The pathological changes were described as severe airsacculitis and pneumonia, which probably were the cause of death of the bird. This study represents the first effort to characterize the parasitism by this nematode in a nocturnal bird of prey from the Neotropics, with a lethal outcome. Additional studies are required from other geographical areas and Neotropical countries to better understand the dynamics of this parasite and their hosts, considering both diurnal and nocturnal birds of prey.

Different Protein Sources of Larval Diet on the Rearing of Anastrepha fraterculus (Diptera: Tephritidae): Biological and Nutritional Analyses.

Anastrepha fraterculus (Diptera: Tephritidae) is considered an important pest in Neotropical countries. The laboratory rearing of this species should reproduce conditions in nature; thus, special attention is required to the nutritional quality of diets for larval development. Protein components (wheat germ) are costly and account for most production costs in lab insect rearing. In this sense, this work aimed to identify ingredients to replace wheat germ, without compromising diet quality for the lab rearing of A. fraterculus. We tested diets composed of whole rice flour, corn flour, and a mixture of whole wheat flour + soybean flour as substitutes for wheat germ as well as a raw wheat germ diet, considered the control. The protein sources used in the larval diet influenced the biological performance of both the larval and adult stages of A. fraterculus during six generations. The diet containing corn flour and wheat germ showed similar results in the different developmental parameters. The diet with rice flour also provided adequate biological development for A. fraterculus throughout its life cycle and was nutritionally similar to the control. As it is local product, rice flour can replace wheat germ (costly imported product) in artificial diets for A. fraterculus, reducing production costs by roughly 30% without compromising the biological and nutritional parameters of the insects. Faced with this, the rice flour can be considered suitable for the mass rearing of A. fraterculus in the laboratory.

Effect of neonicotinoid and fungicide strobilurin in neotropical solitary bee Centris analis

The indiscriminate use of pesticides is one of the factors directly impacting bee populations. However, limited information is available on the pesticide effects on solitary bees, especially in Neotropical countries. In this scenario, this study evaluated the survival and histopathological effects caused by the neonicotinoid insecticide acetamiprid (7 ng/μL) and the fungicide azoxystrobin (10 ng/μL) in the midgut and parietal fat body of the solitary bee Centris analis. Female and male newly-emerged bees were orally exposed for 48 h to the pesticides, or alone or in combination, under laboratory conditions. The exposure to the insecticide reduced the survival of males, while the mixture reduced survival in both sexes. Acetamiprid promoted a reduction in the number of regenerative nests in the midgut, alterations of fat body cells by increasing carbohydrates in trophocytes, and reduction of oenocyte size, and increased the frequency of pericardial cells in the advanced activity stage. Both pesticides caused changes in HSP70 immunolabelling of midgut from males at the end of pesticide exposure. Comparatively, the effects on males were stronger than in females exposed to the same pesticides. Therefore, acetamiprid alone and in mixture with fungicide azoxystrobin can be harmful to males and females of Neotropical solitary bee C. analis showing lethal and sublethal effects at a concentration likely to be found in the environment.

Neotropical non‐primate canopy mammals: historical trends, omissions, and geographic gaps in the knowledge

ABSTRACT Canopy mammals constitute a diverse and widely distributed group. However, these species have not been widely studied, and there are currently many gaps in our knowledge of their ecology, behaviour, distribution, and conservation status. We identified crucial trends and omissions in terms of research effort on research themes, taxonomic groups, countries, and protected areas (PAs) and geographic information biases. A systematic review was conducted by consulting two electronic databases (Web of Science and Scopus), including research conducted within neotropical countries (from central Mexico to northern Argentina) until the end of the first half of 2021. All the references obtained were reviewed and categorised, and the geographical location of each study was extracted to evaluate geographical gaps. We found that two orders (Carnivora and Didelphimorphia) and three families (Didelphidae, Felidae, and Cricetidae) were the most studied taxa, and were featured in more than 50% of cases. Brazil had the highest number of studies. Topics concerning diseases (19% of cases), distribution (14%), and ecology (14%) were the most frequently addressed; only 4.6% of the studies focused on anthropogenic disturbances, and less than 30% of the studies were conducted within PAs. We found that one of the largest and most important geographical biases in knowledge was in the northern Amazon region, where the number of studies was low or null. This study lays the groundwork for future research on these understudied mammals, to develop better research that can allow us to design more appropriate conservation strategies.

Morphological and molecular data suggest the presence of cryptic diversity within Dermacentor nitens (Acari: Ixodidae) in Colombia</p >

Of the 44 species within the genus Dermacentor (Acari: Ixodidae) worldwide, nine are found in the Neotropics and four are endemic to this region. In Colombia, located in the northwestern corner of South America, there are two species of the genus: Dermacentor imitans restricted to the trans-Andean Pacific region, and Dermacentor nitens widely distributed in the country. Elsewhere, D. nitens is found in both the Nearctic and Neotropics, from southern USA to northern Argentina. In the Neotropics, D. nitens is widely distributed including records in Caribbean islands. Molecular analyses of D. nitens collected in the Amazon region of Colombia have shown genetic differences with specimens from other localities of the country, although morphological differences have not been explored. We performed morphological and molecular comparisons of individuals from two natural regions of Colombia: the Orinoquia, and the Amazon. The morphological and morphometric results show that females and males are grouped in two morphotypes: morphotype I from the Orinoquia region, and morphotype II from Leticia in the Amazon region. The molecular analyses supported the morphological results and showed the formation of two well-differentiated sister clades within D. nitens, with divergences between both morphotypes of 3–4% and 5–6% for the 16S rRNA and COI genes, respectively. Species delimitation analyzes and the Poisson Tree Processes model tentatively suggest the presence of two species within the sequences associated with D. nitens in Colombia. The first represented by the sequences from the Orinoquia region evaluated here, together with sequences from other regions of Colombia and other Neotropical countries such as Brazil, Panama, and French Guiana. The second is represented by the sequences of individuals from Leticia, in the Amazon region of Colombia. The results highlight that D. nitens might represent a species complex, but further sampling, experimental crosses, and studies at the level of complete genomes should be performed to obtain additional evidence for species recognition.

The nuclear and mitochondrial genome assemblies of Tetragonisca angustula (Apidae: Meliponini), a tiny yet remarkable pollinator in the Neotropics

BackgroundThe field of bee genomics has considerably advanced in recent years, however, the most diverse group of honey producers on the planet, the stingless bees, are still largely neglected. In fact, only eleven of the ~ 600 described stingless bee species have been sequenced, and only three using a long-read (LR) sequencing technology. Here, we sequenced the nuclear and mitochondrial genomes of the most common, widespread and broadly reared stingless bee in Brazil and other neotropical countries—Tetragonisca angustula (popularly known in Brazil as jataí).ResultsA total of 48.01 Gb of DNA data were generated, including 2.31 Gb of Pacific Bioscience HiFi reads and 45.70 Gb of Illumina short reads (SRs). Our preferred assembly comprised 683 contigs encompassing 284.49 Mb, 62.84 Mb of which (22.09%) corresponded to 445,793 repetitive elements. N50, L50 and complete BUSCOs reached 1.02 Mb, 91 contigs and 97.1%, respectively. We predicted that the genome of T. angustula comprises 17,459 protein-coding genes and 4,108 non-coding RNAs. The mitogenome consisted of 17,410 bp, and all 37 genes were found to be on the positive strand, an unusual feature among bees. A phylogenomic analysis of 26 hymenopteran species revealed that six odorant receptor orthogroups of T. angustula were found to be experiencing rapid evolution, four of them undergoing significant contractions.ConclusionsHere, we provided the first nuclear and mitochondrial genome assemblies for the ecologically and economically important T. angustula, the fourth stingless bee species to be sequenced with LR technology thus far. We demonstrated that even relatively small amounts of LR data in combination with sufficient SR data can yield high-quality genome assemblies for bees.

Impacts and implications of anthropogenic activities on mangrove forests: A review

The purpose of this paper is to review and evaluate published literature on the causes, impacts, implications and mitigation strategies of anthropogenic activities on mangrove forests. A systematic method was utilized to access research works of literature on “Impacts and implications of anthropogenic activities on mangrove forests”. A total of fifty-three (53) research papers published between the years 1975 to 2024 was accumulated and used for this review. A subjective approach was used to select the topics: impact and implications of anthropogenic activities on mangrove forests. In this paper, five (5) roles of mangroves were assessed and presented. Anthropogenic activities that threaten mangrove forests such as land conversion, mining and logging activities and household and industrial activities were also evaluated. Further, four (4) detrimental anthropogenic activities and the potential impacts they have on natural mangrove forests and the ecosystems they thrive in was also reported on. In addition, this paper reviewed some mitigation strategies for sustainable management and conservation of our mangroves, their ecosystems and the coastlines. The published works of literature established that reduced mangrove forests, altered mangrove composition, unequal species abundance, mass mangrove mortality, pollution in mangrove areas, rising sea levels, global climate change and coastal erosion or abrasion are all effects of anthropogenic activity that have a negative impact on mangrove forests and the ecosystems. This review highlights the fact that more studies on the impact and implications of anthropogenic activities on mangroves should be done in neotropical countries since there are paucity of such information on research and published data in these biodiversity rich regions.

A comprehensive review on the impact of climate change on the ecology, breeding seasonality, abundance and distribution of birds and possible approaches to address and conserve bird populations

The purpose of this paper is to review and evaluate published literature on the impact of climate change on birds. A systematic method was utilized to access research works of literature on “Impact of Climate Change on Birds”. A total of sixty-seven (67) research papers published between the years 1962 to 2023 was accumulated and used for this review. A subjective approach was used to select the topics: impact of climate change and birds. In this paper, nine (9) threatening impacts of climate change on the bird populations were assessed and presented as well as three (3) detrimental impacts of climate change on birds inhabiting mangrove forests. Further, this paper assessed some birds that are threatened with extinction and it also provided a checklist of some migratory birds that are threatened due to the changing climate and that are found on the RED list of the IUCN. Approaches and strategies to enhance and address bird conservation to combat the effect of climate change was also presented in this review. The published works of literature established that the global bird population dynamics, ecology, breeding seasonality, abundance and distribution are all affected due to the threats of climate change. Climate change will affect birds indirectly in the future by modifying their habitats through sea level rise, changes in fire regimes, and changes in vegetation or land use. Birds are in particular vulnerable to environmental changes like climate change since they are subject to continuous changes that may be negatively connected. This review highlights the fact that more extensive studies on the impact of climate change on birds should be done in neotropical countries since there are gaps of such information on research and published data in these biodiversity rich regions.

A preliminary systematic review of the impact of cats on wildlife in the Neotropics

Cats are an invasive alien species that can negatively affect wildlife. However, information regarding their impact on Neotropical wildlife is scattered and limited. We conducted a systematic review to identify studies specifically exploring the impact of cats on wildlife in the Neotropics. In particular, we aimed: 1) to identify the temporal evolution of studies on the impact of cats, as well as bias and gaps that have occurred as a result of their spatial distribution (per country) and the typology of their impact; 2) to identify the Neotropical wildlife species directly affected by cat predation and to categorize these according to their taxonomic groups; 3) to describe the research techniques employed; and 4) to compare the environments evaluated (urban, rural, natural, mixed), as well as the different categories of cats (feral, stray, owned, mixed) involved. We found a total of 55 studies conducted in seven Neotropical countries, with Brazil presenting the most research, but found no research at all in 26 countries. Evaluation of pathogens in cats was the main topic addressed. In total, 215 taxa were reported to be affected by cat predation, with birds being the most frequent. Nine techniques were used in these studies, with blood analysis presented as the most commonly used methodology. Owned cats in urban environments were the most frequently evaluated, and stray cats in mixed environment were the least frequently evaluated. Our results show that cats have a significant negative effect on Neotropical wildlife, and increased studies are therefore a priority.

The widespread keeping of wild pets in the Neotropics: An overlooked risk for human, livestock and wildlife health

Abstract Zoonoses constitute a major risk to human health. Comprehensive assessments on the potential emergence of novel disease outbreaks are essential to ensure the effectiveness of sanitary controls and to establish mitigating actions. Through a continental‐scale survey of rural human settlements conducted over 13 years in 15 Neotropical countries, we document the vast extent of poaching to meet the local demand for pets, resulting in thousands of families living with ca. 275 species of wild animals without any sanitary controls. Parrots account for ca. 80% of wild pets, dying mostly from diseases at an average age of 1 year. This culturally rooted tradition, which dates back to pre‐Columbian times, may lead to health risks by bringing wild animals prone to carrying parasites and pathogens into close contact with humans and their exotic pets and livestock. Although animal pathogens and parasites have been transmitted to humans for centuries, the current trend of human population growth and connectivity can increase the risk of zoonotic outbreaks spreading at an unprecedented pace. Similarly, disease transmission from humans and poultry to wild animals is also expected to be facilitated via wild pets, leading to conservation problems. Several studies have highlighted the risk posed by wildlife city markets for cross‐species disease transmission, ignoring the risk associated with widespread pet ownership of wild animals poached locally in rural areas. Given its geographic and social dimensions, a holistic approach is required to reduce this illegal activity as well as to strengthen health surveillance of seized individuals and people in close contact with poached pets, which would benefit both people and wildlife. Read the free Plain Language Summary for this article on the Journal blog.

Impact of climate change on the reproduction, distribution and abundance of herpetofauna: A review of Literature

The purpose of this paper is to review and assess published literature on the impact of climate change on herpetofauna. A systematic approach was used to accumulate research works of literature on “Impact of climate change on herpetofauna.” A total of forty (40) research papers published between the years 1930 to 2023 were accessed and used for this review. Tables were used to present all results. A subjective approach was used to select the topics: impact of climate change and herpetofauna. In this paper, nine (9) detrimental impacts of climate change were assessed and presented; four (4) which are specific to reptiles and five (5) which are specific to amphibians. The published papers established that extreme weather conditions, such as high temperature, heavy precipitation, synergistic vulnerabilities, ultraviolet radiation and repercussions of ectotherm metabolic rate all contribute to the global climate change that are affecting the reproduction, distribution and abundance of herpetofauna. This review highlights the fact that more extensive studies on the impact of climate change on herpetofauna should be done in neotropical countries since there is a paucity of such information on research and published data in these biodiversity rich regions.

Amphibian diversity across three adjacent ecosystems in Área de Conservación Guanacaste, Costa Rica.

Amphibians are the most threatened species-rich vertebrate group, with species extinctions and population declines occurring globally, even in protected and seemingly pristine habitats. These 'enigmatic declines' are generated by climate change and infectious diseases. However, the consequences of these declines are undocumented as no baseline ecological data exists for most affected areas. Like other neotropical countries, Costa Rica, including Área de Conservación Guanacaste (ACG) in north-western Costa Rica, experienced rapid amphibian population declines and apparent extinctions during the past three decades. To delineate amphibian diversity patterns within ACG, a large-scale comparison of multiple sites and habitats was conducted. Distance and time constrained visual encounter surveys characterised species richness at five sites-Murciélago (dry forest), Santa Rosa (dry forest), Maritza (mid-elevation dry-rain forest intersect), San Gerardo (rainforest) and Cacao (cloud forest). Furthermore, species-richness patterns for Cacao were compared with historic data from 1987-8, before amphibians declined in the area. Rainforests had the highest species richness, with triple the species of their dry forest counterparts. A decline of 45% (20 to 11 species) in amphibian species richness was encountered when comparing historic and contemporary data for Cacao. Conservation efforts sometimes focus on increasing the resilience of protected areas, by increasing their range of ecosystems. In this sense ACG is unique containing many tropical ecosystems compressed in a small geographic space, all protected and recognised as a UNESCO world heritage site. It thus provides an extraordinary platform to understand changes, past and present, and the resilience of tropical ecosystems and assemblages, or lack thereof, to climate change.

A review of mushroom cultivation and production, benefits and therapeutic potentials

The purpose of this paper is to review and evaluate published literature on mushroom cultivation and production and the range of benefits and therapeutic potential. A systematic method was used to gather the relavant literature. A total of twenty-six research papers published between the years 1970 to 2022 were selected and utilized in this review. Tables were used to present the results and relevant figures were used to place emphasis on contents discussed. In this paper five (5) benefits and nine (9) therapeutic potentials were evaluated and reported on. Some medicinal mushrooms and their uses and bioactive compounds were also discussed in this paper. Additionally, mushroom cultivation and production was addressed as well as challenges associated with mushroom farming and an assessment of their nutritional content compared to other food consumed by humans. The published papers established that mushrooms have been massed produced and harvested for a long time and their benefits are well documented in countries outside the neotropics. More studies to investigate the uses of mushrooms should be done, in Guyana and other neotropical countries as there is a paucity of information in this region with high natural biodiversity.

Evaluation of the Effect of the ENSO Cycle on the Distribution Potential of the Genus Anastrepha of Horticultural Importance in the Neotropics and Panama.

Climate variability has made us change our perspective on the study of insect pests and pest insects, focusing on preserving or maintaining efficient production systems in the world economy. The four species of the genus Anastrepha were selected for this study due to their colonization and expansion characteristics. Models of the potential distribution of these species are scarce in most neotropical countries, and there is a current and pressing demand to carry out this type of analysis in the face of the common scenarios of climate variability. We analyzed 370 presence records with statistical metrics and 16 bioclimatic variables. The MaxEnt method was used to evaluate the effect of the ENSO cycle on the potential distribution of the species Anastrepha grandis (Macquart), Anastrepha serpetina (Wiedemann), Anastrepha obliqua (Macquart), and Anastrepha striata (Schiner) as imported horticultural pests in the neotropics and Panama. A total of 3472 candidate models were obtained for each species, and the environmental variables with the greatest contribution to the final models were LST range and LST min for A. grandis, PRECIP range and PRECIP min for A. serpentina, LST range and LST min for A. obliqua, and LST min and LST max for A. striata. The percentage expansion of the range of A. grandis in all environmental scenarios was 26.46 and the contraction of the range was 30.80; the percentage expansion of the range of A. serpentina in all environmental scenarios was 3.15 and the contraction of the range was 28.49; the percentage expansion of the range of A. obliqua in all environmental scenarios was 5.71 and the contraction of the range was 3.40; and the percentage expansion of the range of A. striata in all environmental scenarios was 41.08 and the contraction of the range was 7.30, and we selected the best model, resulting in a wide distribution (suitable areas) of these species in the neotropics that was influenced by the variability of climatic events (El Niño, Neutral, and La Niña). Information is provided on the phytosanitary surveillance systems of the countries in areas where these species could be established, which is useful for defining policies and making decisions on integrated management plans according to sustainable agriculture.

State of the art on the knowledge

Considering the diversity of non-flying small mammals in the Neotropical region, the impact of landscape change and the lack of knowledge about the real impacts on this megagroup, we developed a scientometric analysis over a 50-year interval. The study focuses on neotropical countries, especially Brazil, and aims to point out how these communities are structured in different environments. We searched for word combinations in the databases of the Science, Scielo and Scopus websites, resulting in 5,144 records, of which 2,941 were removed from the analysis due to their inadequacy to our topic. Of the 2,203 manuscripts that fit the objective of our study, 816 articles were carried out in Brazil, representing 46% of all publications related to the Neotropical region. The biome with the highest number of publications was the Atlantic Forest. While the knowledge gaps about the Cerrado and Amazon biomes are still evident. It is known that, in Brazil, the inequality in the concentration of investments in research is also reflected in quality scientific production. In this sense, our results highlight the need for a serious policy of investments in science and technology in the country, with partnerships between states and evaluation of the least studied biomes.

First record of the false violin spider of the family Drymusidae (Araneae, Synspermiata, Scytodoidea) from Venezuela, with the description of a new species

Drymusa huberisp. nov. is described and illustrated, based on both sexes with specimens collected in a tropical dry forest in Yaracuy State, Venezuela. This new species constitutes the first record of the family Drymusidae for this Neotropical country and fills the distribution gap of the family in the north of South America. Furthermore, we provide the first identification key for all species of Drymusa Simon, 1892.

Relevance of DNA barcodes for biomonitoring of freshwater animals

The COI gene, colloquially named the DNA barcode, is a universal marker for species identification in the animal kingdom. Nevertheless, due to the taxonomic impediment, there are various proposals for molecular operational taxonomic units (MOTUs) because high-throughput sequencers can generate millions of sequences in one run. In the case of freshwater systems, it is possible to analyze whole communities through their DNA using only water or sediment as a sample. Using DNA barcodes with these technologies is known as metabarcoding. More than 90% of studies based on eDNA work with MOTUs without previous knowledge of the biodiversity in the habitat. Despite this problem, it has been proposed as the future for biomonitoring. All these studies are biased toward the Global North and focused on freshwater macrofaunae. Few studies include other regions of the world or other communities, such as zooplankton and phytoplankton. The future of biomonitoring should be based on a standardized gene, for example, COI, the most studied gene in animals, or another secondary consensual gene. Here, we analyzed some proposals with 28S or 12S. The studies on eDNA can focus on analyses of the whole community or a particular species. The latter can be an endangered or exotic species. Any eDNA study focused on a community study should have a well-documented DNA baseline linked to vouchered specimens. Otherwise, it will be tough to discriminate between false positives and negatives. Biomonitoring routines based on eDNA can detect a change in a community due to any perturbation of the aquatic ecosystem. Also, it can track changes along the history of an epicontinental environment through the analyses of sediments. However, their implementation will be complex in most megadiverse Neotropical countries due to the lack of these baselines. It has been demonstrated that a rapid functional construction of a DNA baseline is possible, although the curation of the species can take more time. However, there is a lack of governmental interest in this kind of research and subsequent biomonitoring.

Long-term Christmas Bird Counts describe neotropical urban bird diversity.

A significant gap in understanding the response of biodiversity to urban areas is the lack of long-term studies. Most of the information on urban birds comes from studies carried out in the northern hemisphere, and they include data that don´t exceed three years. Although short-term studies contribute to knowledge about bird community diversity and their spatial distribution in urban areas, they could be biased towards more conspicuous species. One of the few multi-temporal datasets available for birds in urban areas is the Christmas Bird Count (CBC). Using annual CBC data available between 2001 and 2018 from 21 urban and peri-urban sample sites assessed from the main cities of Colombia, we identified and analyzed long-term trends on the cumulative diversity of bird communities as well as on their spatial distribution. We estimated comparative trends in richness, number of individuals counted, similarity, and complementarity of avifauna for each city and sample site based on their responses to urbanization and dietary guilds. We identified almost a quarter of the species registered in Colombia (464 of 1954). The representativeness of the community obtained for 18 years exceeds 84%, showing richness that ranges between 214 and 278 species in the three cities. Bird species and individuals registered showed wide variation of the sample sites. We found more dwellers, insectivorous and granivorous species in urban areas, with frugivores relegated to peri-urban sites, usually coinciding with avoider species. Natural peri-urban areas and intra-urban wetlands and urban parks were the most important refuges for birds and maintained the highest avoider and utilizer species richness. Long-term inventories are fundamental for determining consolidated bird diversity and distributional patterns. This information established a baseline for decision-making and applying recommendations that allow reconciling the growing demand for urban areas with the need to preserve the native avifauna in megadiverse Neotropical countries such as Colombia.