Species Of Myxomycetes Research Articles

Habitat Suitability and Areal Dynamics of Rare Desert Species of Myxomycetes of the Genus Didymium under Global Climate Change in Asia

Habitat Suitability and Areal Dynamics of Rare Desert Species of Myxomycetes of the Genus Didymium under Global Climate Change in Asia

The Occurrence of Myxomycete Communities in Taxodium distichum Forests: Influence of Substrates and Seasons

Myxomycete communities in Taxodium distichum forests and the influence of substrates and seasons on myxomycete diversity were studied. In total, 80 substrates (40 living barks and 40 litters) were collected from the sample site in winter, spring, summer and autumn of 2023, followed by moist chamber cultures. A total of 733 records representing 34 myxomycete species in 21 genera were obtained. Arcyria cinerea and six other species were abundant (A). Six species were common (C), six species were occasional (O), and fifteen species were rare (R). Species diversity (H’ = 2.04 ± 0.20) of corticolous communities was significantly higher than that (H’ = 1.49 ± 0.31) of litter-inhabiting communities (p < 0.05). Nonmetric Multidimensional Scaling (NMDS) analyses showed significant differences between these two communities (p < 0.01). Species diversity was slightly higher in summer and autumn compared to winter and spring. NMDS analyses indicated no significant differences among seasonal communities. Redundancy Analysis showed that the corticolous species were closely related to wind speed (p < 0.05), while litter-inhabiting species were mainly determined by temperature (p < 0.05). The study revealed that substrates and seasons influenced myxomycete communities in T. distichum forests, with the communities being particularly affected by the substrates in which they live.

New and rare myxomycetes (Mycetozoa, Myxogastria) in Norway Part 2

In this paper, 51 myxomycete species and 8 varieties are reported as new to Norway. Of these, 40 species are reported from the Nordic/Baltic region for the first time. This paper brings the number of myxomycetes known from Norway to a total of 414 species and 31 varieties. An updated checklist of Norwegian myxomycete species and varieties is provided, as well as a list of Norwegian vernacular names.

A new species of the Trichia botrytis complex from the cloud forest in Ecuador

The paper describes a new myxomycete species, Trichia tuberculata, from the Ecuadorian cloud forest. The phylogeny constructed with nuclear 18S rDNA and mitochondrial 17S rDNA sequences indicates that the taxon is closely related to the recently described species T. acetocorticola, T. nubila, and T. pinicola, all within the T. botrytis complex. The morphology of the inner peridium surface and capillitium also aligns T. tuberculata with these species. However, the distinctive tuberculate peridium, short elater tips, and perhaps the distribution range (so far found in the equatorial zone only) distinguish T. tuberculata from related taxa.

Community structure and assembly of myxomycetes in northern Chinese forests under geographic barriers

ABSTRACT The study of myxomycete biogeography has a long-standing history and has consistently drawn scholarly interest. Nevertheless, studies focusing specifically on the spatial and temporal distribution patterns of myxomycete diversity are relatively limited, with even fewer investigating the mechanisms driving the generation and maintenance of myxomycete diversity. Therefore, this study selected two geographically distant sampling sites within northern Chinese forests to investigate myxomycete species composition, community structure, environmental drivers, and assembly patterns under geographic barriers. We established plots in the Altai Mountains (ALE) and the Greater Khingan Mountains (GKM), gathered bark and litter, and conducted 80-day moist chamber cultures of myxomycetes. Additionally, myxomycete specimens were collected in the field simultaneously to supplement the data set. This study collected 541 myxomycete specimens belonging to 73 species from 28 genera, spanning 12 families and eight orders. The ALE and the GKM had 20 identical species, accounting for 27% of the total species. Myxomycetes from both regions exhibited abundant occurrence 18 days after cultivation, with the quantity on bark substrates notably higher than on litter. Arcyria pomiformis and Comatricha elegans were the most common species in moist chamber cultures. Mantel test outcomes revealed that environmental factors had no significant impact on myxomycete community similarity between the two areas, aligning with findings from the neutral community model analysis, indicating a predominant influence of stochastic processes on myxomycete community structure in moist chamber cultures. This study represents the first application of a quantitative framework to analyze myxomycete community assembly cultivated in moist chambers.

Three new species of bright-spored myxomycetes from Asia and the second world record of Perichaena maculosa

Three new species of myxomycetes are described in the genera Arcyria, Metatrichia and Tubifera. Each species is given a full description, along with details of ecology and distribution. They are compared to morphologically similar species, using both light and scanning electron microscopy. DNA extracted from the 18S nrDNA regions (SSU), confirmed the three new species.

Morphological and phylogenetic analyses reveal four species of myxomycetes new to China.

Four species of myxomycetes (Arcyria pseudodenudata, Diderma europaeum, Lycogala irregulare, and Trichia armillata) new to China were observed via light microscope and scanning electron microscope, and detailed descriptions and illustrations are provided, along with comparisons with related species. Among them, A. pseudodenudata was discovered for the first time outside of the type locality, D. europaeum was discovered for the first time outside of Europe, and L. irregulare and T. armillata were reported again after being named. Phylogenetic analyses based on nuclear 18S rDNA and elongation factor-1 alpha sequences or nuclear 18S rDNA and cytochrome oxidase subunit I sequences was performed to provide a molecular basis for morphological identification. These specimens were deposited in the Herbarium of Fungi of Nanjing Normal University.

Taxonomy and phylogeny of three species in Perichaena sensu lato (Myxomycetes = Myxogastria) from China

After Gulielmina was erected and Ophiotheca was resurrected based on some species originally included in Perichaena (Trichiaceae, Trichiales, Myxomyxetes), some specimens from the Herbarium of Fungi of Nanjing Normal University previously identified as Perichaena species were reexamined from morphological and two-gene (nuclear 18S rDNA and elongation factor-1 alpha) phylogenetic perspectives. In this study, two new myxomycete species, Gulielmina subreticulospora and Ophiotheca dictyospora, are described. Gulielmina subreticulospora shows the following character combination: branched plasmodiocarps, single peridium with circular protrusions in the inner surface, capillitium (2.4–)2.8–3.0(–3.4) μm in diameter, spores (7.4–)8.0–8.5(–9.0) μm in diameter and sub-reticulated. Ophiotheca dictyospora shows the following character combination: sessile sporocarps to short plasmodiocarps, single peridium with a densely irregular network and protrusions in the inner surface, capillitium (2.7–)3.5–5.0(–7.1) μm in diameter, uneven, decorated with spines of uneven size, spores (7.7–)8.2–8.6(–9.4) μm in diameter including obviously complete cristate reticulation with serrated edges, with deep and clear grids. Both new taxa were compared with related species and their genetic isolation was statistically tested. Moreover, a comprehensive morphological description and a detailed figure plate are provided for Perichaena verrucifera, and its phylogenetic position is determined.

Myxobiota of the İskenderun Gulf (Mediterranean Sea/Türkiye) and its Environment

This study aims to determine the myxobiota of the İskenderun Gulf and its environment. This study was carried out on samples collected from 9 different stations in the İskenderun Gulf district in 2019-2022. Myxomycetes samples were collected from leaves, tree bark, and decayed and non-rotting plant materials. This aim is to detect both the myxobiota of this region and the halophytic myxomycetes species. The collected samples have developed myxomycete sporophores by using the moist chamber technique. In addition, myxomycetes which were developed in their natural environment were collected. As a result of the field and laboratory studies, 161 samples from different localities were collected and processed and 111 myxomycete samples were obtained from these samples. 41 species belonging to 6 ordo, 12 families, and 20 genera have been defined. 3 species were obtained only from the natural environment, 30 species were obtained only from moist chamber culture, and 8 species were obtained from both moist chamber culture and natural area. Arcyria cinerea, Didymium difforme, D. squamulosum, and Physarum pusillum were determined as abundant. While the number of species is rare in the seaside regions, it was observed that the further away from the sea, the number of species increased, especially in forest areas. A. cinerea, D. difforme, and D. dubium are the most common species on the beach and near the seaside. While cosmopolitan species were observed in abundance, Physarida members were found to be common in this results area. This study has contributed to the myxobiota of Türkiye.

An inexpensive moist chamber culture technique for finding microbiota on live tree bark.

Traditional moist chamber cultures (MCs) prepared in aseptic laboratory environments using sterile Petri dishes are commonly used to quantify the microbiota of rough-bark tree species and woody vines. MCs are typically expensive and may be difficult to make, so a less expensive option made from easily available supplies was developed. These cost-friendly MCs were compared with standard laboratory methods to demonstrate their efficacy. Modified MCs were made using inexpensive, store-bought supplies; compared to a standard laboratory setting, the modified MCs are shown to be less expensive with a faster setup time and larger size that facilitates a variety of tree and woody vine species. MC use resulted in the discovery of new species of fungi and myxomycetes with associated locality records. We provide detailed instructions for creating modified MCs, as well as a list of myxomycete species and their associated bark characteristics, pH values, and water-holding capacity. This new, low-cost MC technique makes the study of microbiota more inclusive and accessible for those in research laboratories, classrooms, and homes, including both amateurs and professionals. MCs are easy to prepare, versatile, and applicable for many areas of botany and the biological sciences, potentially allowing exploration into unexplored areas in urban ecosystems.

Arcyria similaris: A new myxomycete species from China

ABSTRACT A new myxomycete species, Arcyria similaris, was reported herein. The specimens were found and collected in the field on dead bark from Jingangtai National Geopark in Henan Province of China. This species has distinct and unique morphological characteristics, including dark grayish olive sporothecae that fade to smoke gray with age, shallow saucer-shaped cups with marked reticulations and thick papillae on the inner surface, a netted capillitium with many bulges, uniformly marked with low, dense, and irregular reticulations, and spores (8.0–)9.3–10.1(–10.9) μm in diameter, marked with sparse small warts and grouped prominent warts. Apart from a comprehensive morphological study, partial sequences of the nuclear 18S rDNA and elongation factor-1 alpha (EF-1α) genes were also provided in this study. This new species was described and illustrated morphologically. The specimens are deposited in the Herbarium of Fungi of Nanjing Normal University (HFNNU).

Didymium arenosum, a myxomycete new to science from the confluence of deserts in northwestern China.

A new myxomycete species, Didymium arenosum, was described based on morphological evidence and phylogenetic analyses. The species was discovered in the arid region at the confluence of the Badain Jaran desert and Tengger desert on the leaves of Betula platyphylla and was cultivated in a moist chamber culture. Morphologically, the species is distinguished by the greenish-yellow calcium carbonate crystals on the surface and the spores covered with small warts, some of which are connected into a short line. A phylogenetic analysis of D. arenosum strongly supports its classification as a separate clade. The spore to spore agar culture of D. arenosum requires 23 days, and this study provides a detailed description of its life cycle.

Occurrence of myxomycetes in selected elevated urban residential gardens in Metro Manila, Philippines

Roof-top gardens in low- and high-rise urban residential buildings are common in many urban cities for their aesthetic value and perceived health benefits for the building occupants. Leaf litter from plant communities in these gardens offer suitable microclimate conditions and substrates that can support growth and development of myxomycetes. Myxomycetes, also called slime molds, play a role in maintaining the soil microbiome, and can influence the microbial communities in these residential gardens. In this study, 204 ground leaf litter samples of ornamental woody shrubs and herbaceous flowering plants were collected from elevated gardens in eight low-to-high rise buildings for the preparation of moist chambers (MC). A total of 14 species of myxomycetes belonging to nine genera were recorded and identified in this study: Arcyria cinerea, Collaria arcyrionema, Diachea leucopodia, Diderma effusum, Diderma hemisphaericum, Didymium nigripes, Didymium sp., Didymium squamulosum, Ophiotheca chrysosperma, Perichaena cf. corticalis, Perichaena depressa, Physarum album, Physarum cinereum, and Stemonitis cf. pallida. Overall MC productivity ranged from 43 to 45%. In terms of species abundance, Arcyria cinerea and Perichaena depressa were among the most recorded myxomycetes. The study provided evidence of rooftop gardens as suitable habitats for myxomycetes.

Tasmaniomyxa umbilicata, a new genus and new species of myxomycete from Tasmania

ABSTRACT A new genus and species of myxomycete, Tasmaniomyxa umbilicata, is described based on numerous observations in Tasmania and additional records from southeastern Australia and New Zealand. The new taxon is characterized by an unusual combination of characters from two families: Lamprodermataceae and Didymiaceae. With Lamprodermataceae the species shares limeless sporocarps, a shining membranous peridium, an epihypothallic stalk, and a cylindrical columella. Like Didymiaceae, it has a soft, flaccid, sparsely branched capillitium, with rough tubular threads that contain fusiform nodes and are firmly connected to the peridium. Other characters of T. umbilicata that also occur in many Didymiaceae are the peridium dehiscing into petaloid lobes, the yellow, motile plasmodium, and the spores ornamented with larger, grouped and smaller, scattered warts. The transitional position of the new taxon is reflected by a three-gene phylogeny, which places T. umbilicata at the base of the branch of all lime-containing Physarales, thus justifying its description as a monotypic genus.

Three new species of myxomycetes from Siberia.

Three new species of myxomycetes from Siberia.

Species Diversity of Myxomycetes of the “Nizhnyaya Kama” National Park and Adjacent Territories in the Early Autumn Period

The paper presents data on the distribution and species diversity of myxomycetes in the territory of the “Nizhnyaya Kama” National Park and its surroundings during early autumn of 2021 and 2022. A total of 40 species of myxomycetes were found in the unique spruce-alder ravine ecotopes and coniferous-broadleaved forest communities of the National Park, with 3 of them being new records for the Republic of Tatarstan. Additionally, the species Dictydiaethalium plumbeum was recorded for the first time in this area since 1887, in a similar microhabitat. An annotated checklist and authors’ photos of some species are provided.

Genome size and GC content of myxomycetes

More than 1272 myxomycetes species have been described, accounting for more than half of all Amoebozoa species. However, the genome size of only three myxomycetes species has been reported. Therefore, we used flow cytometry to present an extensive survey and a phylogeny-based analysis of genome size and GC content evolution in 144 myxomycetes species. The genome size of myxomycetes ranged from 18.7 Mb to 470.3 Mb, and the GC content ranged from 38.7% to 70.1%. Bright-spored clade showed larger genome sizes and more intra-order genome size variations than the dark-spored clade. GC content and genome size were positively correlated in both bright-spored and dark-spored clades, and spore size was positively correlated with genome size and GC content in the bright-spored clade. We provided the first genome size data set in Myxomycetes, and our results will provide helpful information for future Myxomycetes studies, such as genome sequencing.

Assessment of myxomycete species diversity on twig litter on Yakushima Island, World Natural Heritage site, Japan

Assessment of myxomycete species diversity on twig litter on Yakushima Island, World Natural Heritage site, Japan

New data to Hungarian slime molds (Protozoa: Myxomycetes)

The authors publish occurrence data from 2011 to 2023 of slime mold (Myxomycetes) species from Hungary. In addition to the collected data, the present paper contains data from citizen science platforms. A total of 253 occurrence data of 41 slime mold species and 2 varietas are given, among them, 5 species are new records for Hungary. Contrary to previous studies, two species, that were found on a real mushroom (Fungi) substrate are identified. By the data published on the distribution and substrate of the species, the current paper significantly expands the knowledge of Hungarian slime molds.

Diversity of bacterial communities in the plasmodia of myxomycetes

BackgroundMyxomycetes are a group of eukaryotes belonging to Amoebozoa, which are characterized by a distinctive life cycle, including the plasmodium stage and fruit body stage. Plasmodia are all found to be associated with bacteria. However, the information about bacteria diversity and composition in different plasmodia was limited. Therefore, this study aimed to investigate the bacterial diversity of plasmodia from different myxomycetes species and reveal the potential function of plasmodia-associated bacterial communities.ResultsThe bacterial communities associated with the plasmodia of six myxomycetes (Didymium iridis, Didymium squamulosum, Diderma hemisphaericum, Lepidoderma tigrinum, Fuligo leviderma, and Physarum melleum) were identified by 16S rRNA amplicon sequencing. The six plasmodia harbored 38 to 52 bacterial operational taxonomic units (OTUs) that belonged to 7 phyla, 16 classes, 23 orders, 40 families, and 53 genera. The dominant phyla were Bacteroidetes, Firmicutes, and Proteobacteria. Most OTUs were shared among the six myxomycetes, while unique bacteria in each species only accounted for a tiny proportion of the total OTUs.ConclusionsAlthough each of the six myxomycetes plasmodia had different bacterial community compositions, a high similarity was observed in the plasmodia-associated bacterial communities' functional composition. The high enrichment for gram-negative (> 90%) and aerobic (> 99%) bacteria in plasmodia suggest that myxomycetes may positively recruit certain kinds of bacteria from the surrounding environment.