Multiple Opening/Closing Net And Environmental Sensing System Research Articles

Characterization of the Mitochondrial Genome, Ecological Distribution, and Morphological Features of the Marine Gastropod Mollusc Lophocochlias parvissimus (Gastropoda, Tornidae)

The larvae of the marine gastropod Lophocochlias parvissimus are meroplankton that spend part of their lives as plankton that disperse and drift in the water column before settling on the sea floor. Two individuals of L. parvissimus larvae were sampled by the Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) from the Central Indian Ridge of the southwestern Indian Ocean in 2018 and 2019. We generated the first mitochondrial sequences for L. parvissimus, which will provide valuable genetic insight into the evolution of these organisms. In this study, we have determined that the mitogenome of L. parvissimus was 13,575 bp in length, consisting of 13 protein-coding genes, 18 tRNAs, and two rRNAs. Our work provides a new insight into the dispersal of L. parvissimus and previously missing components to the general understanding of the evolution of Truncatelloidea (Subclass Caenogastropoda).

Three Distinct Views of Deep Pelagic Community Composition Based on Complementary Sampling Approaches

Our perception of deep-sea communities has evolved as various sampling approaches have captured different components of deep-sea habitats. We sampled midwater zooplankton assemblages in Monterey Bay, California to quantify community composition (abundance and biomass) and biodiversity (at the Order level) across three depth ranges, and the effects of sampling methodology on community parameters. We collected zooplankton using two types of opening-closing trawls [Tucker Trawl and Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS)] and video recordings from a remotely operated vehicle (ROV). We quantified the relative contributions of microbes to community biomass using synoptic water-bottle casts and flow cytometry. Overall, the pelagic community was most similar between the Tucker trawl and ROV (dissimilarity = 52.4%) and least similar between the MOCNESS and ROV (dissimilarity = 65.8%). Dissimilarity between sampling methods was driven by the relative abundances of crustaceans and gelatinous taxa, where gelatinous animals (cnidarians, ctenophores, tunicates) were more abundant in ROV surveys (64.2%) and Tucker trawls (46.8%) compared to MOCNESS samples (14.5%). ROV surveys were the only method that sufficiently documented the most physically delicate taxa (e.g., physonect siphonophores, lobate ctenophores, and larvaceans). Biomass was also one order of magnitude lower in MOCNESS trawls compared to Tucker trawls. Due to these large differences, the relative contributions of microbes to total biomass were substantially lower in Tucker trawl samples (mean = 7.5%) compared to MOCNESS samples (mean = 51%). These results illustrate that our view of planktonic composition and community biomass is strongly dependent on sampling methodology.

Ocean deoxygenation and copepods: coping with oxygen minimum zone variability

Abstract. Increasing deoxygenation (loss of oxygen) of the ocean, including expansion of oxygen minimum zones (OMZs), is a potentially important consequence of global warming. We examined present-day variability of vertical distributions of 23 calanoid copepod species in the Eastern Tropical North Pacific (ETNP) living in locations with different water column oxygen profiles and OMZ intensity (lowest oxygen concentration and its vertical extent in a profile). Copepods and hydrographic data were collected in vertically stratified day and night MOCNESS (Multiple Opening/Closing Net and Environmental Sensing System) tows (0–1000 m) during four cruises over a decade (2007–2017) that sampled four ETNP locations: Costa Rica Dome, Tehuantepec Bowl, and two oceanic sites further north (21–22∘ N) off Mexico. The sites had different vertical oxygen profiles: some with a shallow mixed layer, abrupt thermocline, and extensive very low oxygen OMZ core; and others with a more gradual vertical development of the OMZ (broad mixed layer and upper oxycline zone) and a less extensive OMZ core where oxygen was not as low. Calanoid copepod species (including examples from the genera Eucalanus, Pleuromamma, and Lucicutia) demonstrated different distributional strategies (implying different physiological characteristics) associated with this variability. We identified sets of species that (1) changed their vertical distributions and depth of maximum abundance associated with the depth and intensity of the OMZ and its oxycline inflection points; (2) shifted their depth of diapause; (3) adjusted their diel vertical migration, especially the nighttime upper depth; or (4) expanded or contracted their depth range within the mixed layer and upper part of the thermocline in association with the thickness of the aerobic epipelagic zone (habitat compression concept). These distribution depths changed by tens to hundreds of meters depending on the species, oxygen profile, and phenomenon. For example, at the lower oxycline, the depth of maximum abundance for Lucicutia hulsemannae shifted from ∼600 to ∼800 m, and the depth of diapause for Eucalanus inermis shifted from ∼500 to ∼775 m, in an expanded OMZ compared to a thinner OMZ, but remained at similar low oxygen levels in both situations. These species or life stages are examples of “hypoxiphilic” taxa. For the migrating copepod Pleuromamma abdominalis, its nighttime depth was shallow (∼20 m) when the aerobic mixed layer was thin and the low-oxygen OMZ broad, but it was much deeper (∼100 m) when the mixed layer and higher oxygen extended deeper; daytime depth in both situations was ∼300 m. Because temperature decreased with depth, these distributional depth shifts had metabolic implications. The upper ocean to mesopelagic depth range encompasses a complex interwoven ecosystem characterized by intricate relationships among its inhabitants and their environment. It is a critically important zone for oceanic biogeochemical and export processes and hosts key food web components for commercial fisheries. Among the zooplankton, there will likely be winners and losers with increasing ocean deoxygenation as species cope with environmental change. Changes in individual copepod species abundances, vertical distributions, and life history strategies may create potential perturbations to these intricate food webs and processes. Present-day variability provides a window into future scenarios and potential effects of deoxygenation.

Mesozooplankton and Micronekton Active Carbon Transport in Contrasting Eddies

Mesozooplankton (June 2015 and September 2017) and micronekton (September 2017) were sampled along the eastern coast of Australia. Depth stratified mesozooplankton and micronekton were collected using a Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) and an International Young Gadoid Pelagic Trawl (IYGPT) equipped with an opening/closing codend. Sampling was undertaken at the center and edge of a frontal cold-core eddy (F-CCE center and edge) in 2015, and at the center of a cold-core eddy (B-CCE) and two warm-core eddies (R-WCE and WCE) in 2017. We assess the diel vertical structure, biomass and downward active carbon transport by mesozooplankton and micronekton in eddies. Total water column mesozooplankton and micronekton biomass did not vary substantially across water masses, while the extent and depth of diel vertical migration did. Using in-situ measurements of temperature and measurements of mesozooplankton and micronekton abundance and biomass, we estimated the contribution of respiration, dissolved organic carbon (DOC) excretion, gut flux and mortality to total downward active carbon transport in each water mass. Overall, active carbon transport by mesozooplankton and micronekton below the mixed layer varied substantially across water masses. We corrected estimates of micronekton migratory biomass and active carbon transport assuming 50% net efficiency. Specifically, inIn the R-WCE mesozooplankton remained within the mixed layer during the day and night; only 50% of the total micronekton population migrated below the mixed layer contributing to carbon transport, equating to 1.52.89 mg C m-2 d-1. Mesozooplankton actively transported 16.1 and 8.0 mg C m-2 d-1 at the F-CCE Center and Edge, respectively. Mesozooplankton and micronekton active carbon transport in the B-CCE were 5.4 and 0.40.74 mg C m-2 d-1, and in the WCE 88 and 6.713.4 mg C m-2 d-1. Differences in carbon export were dependent on food availability, temperature, time spent migrating and mixed layer depth. These findings suggest that under certain conditions mesoscale eddies can act as important carbon sinks.

The Pelagic In situ Observation System (PELAGIOS) to reveal biodiversity, behavior, and ecology of elusive oceanic fauna

Abstract. There is a need for cost-efficient tools to explore deep-ocean ecosystems to collect baseline biological observations on pelagic fauna (zooplankton and nekton) and establish the vertical ecological zonation in the deep sea. The Pelagic In situ Observation System (PELAGIOS) is a 3000 m rated slowly (0.5 m s−1) towed camera system with LED illumination, an integrated oceanographic sensor set (CTD-O2) and telemetry allowing for online data acquisition and video inspection (low definition). The high-definition video is stored on the camera and later annotated using software and related to concomitantly recorded environmental data. The PELAGIOS is particularly suitable for open-ocean observations of gelatinous fauna, which is notoriously under-sampled by nets and/or destroyed by fixatives. In addition to counts, diversity, and distribution data as a function of depth and environmental conditions (T, S, O2), in situ observations of behavior, orientation, and species interactions are collected. Here, we present an overview of the technical setup of the PELAGIOS as well as example observations and analyses from the eastern tropical North Atlantic. Comparisons to data from the Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) net sampling and data from the Underwater Vision Profiler (UVP) are provided and discussed.

Vertical distribution of Todarodes pacificus (Cephalopoda: Ommastrephidae) paralarvae near the Oki Islands, southwestern Sea of Japan

The diel vertical distribution patterns of Japanese common squid, Todarodes pacificus, paralarvae were examined using a Multiple Opening Closing Net and Environmental Sensing System (MOCNESS) in the southwest Sea of Japan near the Oki Islands (Japan) during five late-autumn surveys in 1998–2002. A total of 1,511 paralarvae ranging in mantle length (ML) from 0.7 to 7.3 mm were collected at 63 of the 68 stations surveyed. Most (84%) were collected above 75 m depth and in the mixed layer. The vertical distribution patterns varied little between day and night. Hatchling-sized (<1.0 mm ML) paralarvae were abundant at 0–25 m depth, and paralarval ML increased with increasing sampling depth. Our results suggest that T. pacificus paralarvae do not exhibit large diel vertical migration patterns, but as they increase in size, paralarvae gradually descend in the water column and the variability in depth increases with ontogeny.

A Coupled Asymmetrical Multiple Opening Closing Net with Environmental Sampling System

Recruitment levels of fishes are potentially related to the abundance of larval fishes and their food source. A system that could allow for the concurrent investigation of fine-scale distribution of fish larvae and their potential prey could add significantly to the understanding of the early life history of marine fishes. A coupled Multiple Opening Closing Net and Environmental Sensing System (MOCNESS) that combines two sub-systems (1 m2 and 4 m2 net sets) working in synchronization was designed to answer these questions. The mesh size was different on each set of nets allowing the collection of a broad size range of organisms while optimizing the catch of larger fish larvae and eliminating unnecessary large samples of zooplankton. Moreover, the system eliminated the need to deploy separate MOCNESS using different mesh sizes, thus reducing ship time costs, and avoiding any aliasing associated with trying to sample the same water mass with separate nets fished sequentially. The system has been used at sea under varying weather conditions onboard the R/V F. G. Walton Smith and sampled adequately.

Euphausiid distribution, abundance and succession in North Atlantic warm-core ring 82B

Zooplankton collections were made with a multiple opening/closing net and environmental sensing system (MOCNESS) both day and night in warm-core ring 82B in the North Atlantic Ocean and at night in the Slope Water between March and August 1982. Species succession of euphausiids in 82B was presented during the lifespan of this warm-core ring, aiming at providing basic information on possible response of North Atlantic marine ecosystem to global warming. Species succession of euphausiids (32 species) in this long-lived warm-core ring was investigated. Major physical changes of 82B occurred in March to April by convective mixing and thermostad cooling, in April/May by stratification of the surface waters and in August by the interaction with Gulf Stream. Substantial changes in species composition were observed that corresponded to these physical changes. Four different patterns were found in temporal change in abundance of warm-water species. There were species that decreased in number from March to August, species that decreased from March to June, but increased in August, species that increased from Match to August and species that showed no systematic trend. These differences may be attributable to a species tolerance to the thermostad temperature decrease and their vertical distribution. There was also a large change from April to June with ascendance of the transition species, Thysanoessa gregaria. Cold-water species had variable patterns of abundance in 82B and occurred more abundantly in the Slope Water than in the ring. The monthly percentage decrease in the abundance of warm-water species in 82B was high compared with that of cold-water species in cold-core rings as a result of the more rapid changes in the physical structure and the shorter lifetimes of warm-core rings in the western North Atlantic.

Comparisons of Calanus finmarchicus fifth copepodite abundance estimates from nets and an optical plankton counter

The response of an optical plankton counter (OPC) to concentrations of Calanus finmarchicus fifth copepodites (C5) ranging from 2 to 1621 copepods m -3 was examined during the summers of 1999-2001 over the continental shelf of the northwest Atlantic Ocean. Net tows from either a bongo net or a multiple opening/closing net and environmental sensing system (MOCNESS) were collocated with vertical OPC casts to provide comparable data. OPC-derived particle abundance in the 1.5-2.0 mm equivalent circular diameter range was strongly correlated with net-derived abundance of C. finmarchicus C5 (r2 = 0.655 and 0.726 for comparisons in two independent datasets). Particle abundance in this size range increased with increases in the descent speed of the vertically profiled OPC, which indicated avoidance of the small sampling aperture by C. finmarchicus C5. A regression model was developed to relate OPC particle abundance in the 1.5-2.0 mm size range to the abundance of C. finmarchicus C5 and the descent speed of the OPC. The data fitted the model well (r 2 = 0.684) and the inverted model was used as a calibration equation to predict C. finmarchicus C5 abundances from OPC measurements in an independent comparison to net abundances. In that case, the calibration equation underestimated net abundance by an average factor of 2. However, anomalously low OPC particle abundances for some casts suggest that spatial heterogeneity (patchiness) can confound such comparisons.

Living in suboxia: Ecology of an Arabian Sea oxygen minimum zone copepod

Oxygen minimum zones (OMZs) are permanent suboxic features of the oceanic water column that strongly influence zooplankton distributions and biogeochemical cycles. The lower interface of prominent OMZs is characterized by a subsurface zooplankton biomass peak and high biological activity. The calanoid copepod Lucicutia grandis is an indicator species for this habitat. Its ecology in the Arabian Sea was studied during the U.S. Joint Global Ocean Flux Study (JGOFS) program to understand planktonic distributional and developmental adaptations to oxygen gradients in suboxic environments and the role of the OMZ zooplankton in food webs, vertical flux processes, and carbon cycles. Zooplankton samples were obtained in vertically stratified multiple opening‐closing net and environmental sensing system (MOCNESS) tows to 1,000 m during four seasonal cruises. The vertical distribution of L. grandis was associated with the steep oxygen gradient from 0.07 to 0.15 ml L−1 at the base of the OMZ about 600–1,000 m. There was a clear progression with age of the depths and oxygen levels inhabited by different developmental stages within this zone, a phenomenon attributed to both physiological constraints and ecological interactions. The seasonal and spatial pattern of reproduction and development was keyed in part to the seasonal monsoon cycle, with final maturation of young stages into reproducing adults probably triggered by the direct and indirect effects of the seasonal or episodic input to depth of sinking particles. Gut contents included surface flux material, deep‐sea detrital material, zooplankton remains, and deep‐sea aggregate material, indicating that L. grandis occupies at least four different trophic levels. This was an active, not a diapausing, population, since both adults and immature stages fed and reproduced during all seasons. In contrast to the pelagic fauna that are severely impacted by coastal episodic hypoxia, the animals of the oceanic OMZ are uniquely adapted to the very low oxygen and strong spatial and temporal patterns of this widespread suboxic environment.

Assessing the distribution and abundance of zooplankton: a comparison of acoustic and net-sampling methods with D-BAD MOCNESS

Results are described from the first field study with the D-BAD MOCNESS (Dual-Beam Acoustics Deployed on a Multiple Opening/Closing Net and Environmental Sensing System), an instrument designed to collect acoustic data and net samples simultaneously from the same portion of the water column. Our primary objective was to evaluate the advantages and disadvantages of integrating in a single instrument these two very distinctive methods for assessing the distribution and abundance of zooplankton. In this context, we required a means of comparison that would enable us to groundtruth acoustic remote-sensing data with net sample data. The approach chosen, referred to as the forward-problem approach, compares the acoustic volume backscattering coefficients observed in situ with those predicted from net sample data and acoustic scattering models. The results from this study show that the observed acoustic volume backscattering data are generally consistent with the forward-problem predictions. This consistency is true in terms of both total acoustic volume backscattering as well as that portion of the volume backscattering contributed by each of the dominant sound scatterer types. The results also provide two examples of situations in which inconsistencies between the observed and predicted acoustic volume backscattering can be used to detect potential methodological problems. D-BAD MOCNESS appears to be a useful instrument for groundtruthing acoustic data; however, due to its slow towing speed, it is not a suitable instrument for large-scale, acoustic survey work.

Video Plankton Recorder estimates of copepod, pteropod and larvacean distributions from a stratified region of Georges Bank with comparative measurements from a MOCNESS sampler

A two-vessel exercise was conducted over the southern flank of Georges Bank during the onset of vernal stratification in May 1992. The Video Plankton Recorder (VPR), a towed video system, was used to map out the fine-scale distributions of zooplankton to a depth of 70 m along a trackline which described a regular grid (3.5 × 4.5 km) in Lagrangian space. A second vessel following a parallel course conducted Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) sampling during the last section of the grid, which provided an opportunity to compare data from the two systems. Both the VPR and the MOCNESS provided similar data on the taxonomic composition of the plankton which was numerically dominated by copepods (Calanus, Pseudocalanus, Oithona), pteropods (Limacina) and larvaceans (Oikopleura). The absence of rare (<43.1 m−3) species from the VPR dataset was a consequence of the small volume sampled (0.0694 m3) by the high magnification camera, while fragile gelatinous taxa were undersampled by the MOCNESS. Estimates of copepod and pteropod concentrations were comparable for the two gear types. While the species composition of the plankton did not change statistically along the grid, abundances of the dominant taxa varied along the transect and each taxon demonstrated pronounced fine-scale vertical patterns that appeared to be related to hydrographic features. The VPR represents a powerful tool for rapid surveys of the micro- to fine-scale structure of zooplankton assemblages either alone, or in conjunction with other sampling techniques.

Acoustical study of the spatial distribution of plankton on Georges Bank and the relationship between volume backscattering strength and the taxonomic composition of the plankton

High frequency (420 kHz) sound was used to study the volume backscattering from plankton and micronekton over Georges Bank as part of a study designed to determine the correlation length scales of plankton spatial patterns in relation to physical structure and to intercompare different kinds of sampling and remote-sensing instrumentation. Two physically distinct areas were studied: a well-mixed area in a shallow portion of the Bank and a stratified area on the deeper southern flank of the Bank. A submersible echo sounder with a down-looking transducer was mounted in a towed V-fin. Volume backscattering data were collected from near the sea surface to the bottom (40–80 m).Vertical and horizontal volume backscattering structure in the stratified region differed from that in the well-mixed area in both mean and variance, providing evidence that physical forcing of the pattern varied significantly between the two areas. Internal waves appeared to modulate the depth of dense mid-depth volume scattering layers in the stratified sites. In the mixed area, there was little horizontal layering or coarse-scale horizontal structure. However, fine-scale vertical lineations were evident with horizontal length scales on the order of the depth of the water column. One hypothesis to explain these vertical lineations in the well-mixed areas involves the development of secondary vertical circulation cells associated with the tidal flows over a rough bottom. Although volume backscattering at the stratified sites was 4–7 times higher than at the mixed site, there was no significant difference in MOCNESS (Multiple Opening/Closing Net and Environmental Sensing System) collected biovolumes between these locations. The difference in volume backscattering was due to differences in both the acoustic scattering properties of zooplankton taxa and the taxonomic composition of the plankton between the sites. Correlations between taxon abundance and volume scattering were positive and significant only for pteropods and euphausiid larvae. The abundances of copepods, chaetognaths, fish larvae, and amphipods were not significantly correlated with volume scattering. When taxon-specific model predictions of acoustic backscattering cross-section, developed by Stanton et al. (ICES Journal of Marine Science, 51(1994) 505–512), were used with field collected individual size and abundance data to predict measured volume backscattering data, good agreement was found between observed and predicted volume backscattering strengths.

New development in the MOCNESS, an apparatus for sampling zooplankton and micronekton

Four variants of the Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) have been constructed to sample a broad size spectrum of oceanic animals from microzooplankton to micronekton. The systems differ in mouth opening dimensions (ranging from 1/4 to 20 m2), the number of nets carried (from 5 to 20), and the mesh size of the netting (from 64 μm to 3.0 mm). A new electronics package enables an operator to send commands down a single conductor, armored cable to open/close the nets and provides 12-bit resolution for the environmental (temperature, depth, conductivity) and net operation data (flow, net-frame angle, net-bar release), which are transmitted up the cable to the deck unit at 2-s intervals. A microcomputer system, interfaced to the deck unit, calculates salinity, volume filtered by a net, net trajectory velocity, and vertical velocity. The data are printed out and stored on disc, and profiles of temperature and salinity versus depth are plotted during the course of the tow. Analysis of the relationship between the geometry of the MOCNESS under tow and the past and present methods used to estimate the water filtered by a net revealed that significant bias is introduced when the ascent or descent angle of a net is disregarded. The bias is a function of the ratio of vertical velocity to net trajectory velocity and results in an underestimate of volume filtered while shooting a net and an overestimate while hauling.

Vertical distribution and isotopic fractionation of living planktonic foraminifera from the Panama Basin

A model1,2, which explains the vertical and seasonal distribution of planktonic foraminifera was developed using data from the western North Atlantic and is comprised of three tenets: (1) The conditions in the photic zone (upper 80–100 m) exclusively dictate planktonic foraminifera species composition and abundance throughout the water column. (2) Species are vertically stratified within the photic zone according to their temperature preference. Depth distribution according to temperature preference has been proposed by several authors3 based on isotope analyses of sediments. Due to seasonal temperature variations, seasonal variations in the δ18O composition of seawater, and species-specific isotope fractionation, rigorous proof of this hypothesis cannot be provided from sediment analyses alone. (3) The chlorophyll maximum is a major food source zone, which is preferentially exploited by foraminifera. Our data from the Panama Basin, which are presented here, are confirmation of this model. The Panama Basin in the eastern equatorial Pacific, which has a shallow and steep thermocline, was sampled for living planktonic foraminifera. A multiple opening–closing net and environmental sensing system (MOCNESS)4 was used to collect 13 sets of eight vertically stratified oblique samples. We report here the quantitative distribution and stable isotopic composition of planktonic foraminifera from four MOCNESS tows taken over 5 days, during August 1979 (RV Knorr cruise 73) at 5°20′ N, 8°50′ W. Each tow consisted of eight samples which integrated ∼12.5-m intervals from 0 to 100 m for MOC 126, 25-m intervals from 0 to 200 m for MOC 127, 100–150-m intervals from 0 to 1,000 m on MOC 128 and 250-m intervals from 0 to 2,000 m on MOC 131.