Indian monsoon is the most prominent of the world’s monsoon systems which primarily affects synoptic patterns of India and adjacent countries such as Iran in interaction with large-scale weather systems. In this article, the relationship between the withdrawal date of the Indian monsoon and the onset of fall precipitation in Iran has been studied. Data included annual time series of withdrawal dates of the Indian monsoon prepared by the Indian Institute for Tropical Meteorology, and time series of the first date of 25 mm accumulated precipitation over Iran’s synoptic weather stations in a 10-day period which is the basis for the cultivation date. Both time series were considered in Julian calendar with the starting date on August 1. The studied period is 1960–2014 which covers 55 years of data from 36 meteorological stations in Iran. By classifying the withdrawal dates of the Indian monsoon in three stages of late, normal, and early withdrawals, its relation with the onset of fall precipitation in western, southwestern, southern, eastern, central, and northern regions of Iran was studied. Results demonstrated that in four out of the six mentioned regions, the late withdrawal of the Indian monsoon postpones the onset of fall precipitation over Iran. No significant relation was found between the onset of fall precipitation in central region of Iran and the monsoon’s withdrawal date. In the western, southwestern, southern, and eastern regions of Iran, the late monsoon delays the onset of fall’s precipitation; while in the south Caspian Sea coastal area, it causes the early onset of autumnal precipitation. The lag in onset of fall precipitation in Iran which is coordinated with the late withdrawal of monsoon is accompanied with prolonged subtropical high settling over Iran’s plateau that prevents the southward movement of polar jet frontal systems. Such conditions enhance northerly wind currents over the Caspian Sea which, in turn, increase the precipitation in Caspian coastal provinces, which has a different behavior from the overall response of Iran’s climate to the late withdrawal of monsoon. In the phase of early monsoon withdrawal, the subtropical jet is located at the 200 hPa level in 32.5° north latitude; compared with the late withdrawal date, it shows a 2° southward movement. Additionally, the 500 hPa trough is also located in the Eastern Mediterranean, and the MSL pressure anomaly is between − 4 to − 7 hPa. The Mediterranean trough in the late withdrawal phase is located in its central zones. It seems that the lack of significant correlation between late withdrawal date of Indian monsoon and late fall’s precipitation onset in the central region of Iran depends on three reasons: 1. Lack of adequate weather stations in central region of Iran. 2. Precipitation standard deviations over arid and warm regions are high. 3. Central flat region of Iran without any source of humidity is located to the lee side of Zagros mountain range. So intensification or development of frontal systems is almost prohibited over there.