Mountain Goats Research Articles

Linking proximate drivers and fitness returns of vigilance in a large ungulate

Vigilance allows animals to quickly detect threats from conspecifics and predators to avoid or minimize costly encounters. Time spent vigilant is usually traded‐off against other fitness‐enhancing activities, such that fitness returns are expected when allocation to vigilance increases. We assessed the proximate factors influencing vigilance and investigated whether vigilance correlates with fitness in wild mountain goats. We first studied which extrinsic and intrinsic factors influenced alert duration and frequency using focal observations recorded over 12 years on individually‐marked adult females. We found that females increased vigilance in forested areas compared with open areas and were less vigilant when they were surrounded by conspecific neighbours. Reproductive females were more frequently vigilant and for longer periods compared with females without offspring. Mothers also tended to perform longer alerts when their offspring was > 10 m away than at shorter distances, suggesting that variation in offspring's vulnerability to predation influences mother's vigilance. Thus, predation risk and offspring vulnerability were the main mechanisms driving variation in vigilance. To assess fitness returns, we then used a joint modelling framework to estimate the latent correlations at the individual level among vigilance traits (alert duration, alert frequency, and total time spent vigilant) and fitness components (adult female survival and offspring survival) while accounting for the drivers observed to influence vigilance. Contrary to expectations, we found no evidence that vigilance is associated with fitness returns, with only some traits being at best weakly positively correlated with survival of offspring and adult females. This might arise because vigilance incurs costs that outweighs its potential benefits, or because vigilance metrics are not repeatable due to their high plasticity, challenging the commonly assumed positive relationship between vigilance and fitness.

Of goats and heat, the differential impact of summer temperature on habitat selection and activity patterns in mountain goats of different ecotypes.

Climate change disproportionately affects northern and alpine environments, with faster rates of warming than the global average. Because alpine and northern species are particularly well adapted to cool temperatures, most species must modify their behavior when temperatures exceed a critical threshold. Evaluating how temperature increases affect species inhabiting northern and alpine environments is therefore essential to understand the effects of projected climate change on these ecosystems. We analyzed the influence of temperature on the activity patterns and habitat selection of four populations of a cold-adapted, mountain specialist, the mountain goat (Oreamnos americanus). We collected GPS location and activity sensor data during 2010-2019 from 223 mountain goats from two distinct ecotypes: coastal and continental. Using a resource selection modeling approach, we determined that mountain goats of both ecotypes decreased selection for alpine meadows when temperatures increased. Reduced selection for open, forage rich habitat was associated with increased selection for habitat dominated by snow/ice patches in coastal areas, and by forests in continental sites. Mountain goats in continental environments selected higher elevation habitats only when temperature increased, whereas goats in coastal environments selected higher elevation habitat at all temperatures. Mountain goats of both ecotypes reduced the proportion of time spent active when temperatures increased during the middle of the day. Our study reveals that mountain goats use diverse tactics to mitigate thermal stress, and that these tactics vary between ecotypes, highlighting the need for considering adaptation to specific environments within a species when assessing climate change impacts on populations.

Gugwilx'ya'ansk and goats: Indigenous perspectives on governance, stewardship and relationality in mountain goat (mati) hunting in Gitga'at territory

Gugwilx'ya'ansk and goats: Indigenous perspectives on governance, stewardship and relationality in mountain goat (mati) hunting in Gitga'at territory

Facts about Wildlife Diseases: Things You Should Know about Mule Deerpox Virus in Farmed White-Tailed Deer in Florida

Pox viruses are widespread and infect many hosts, including insects, reptiles, birds, and mammals. Some, like chicken pox, are highly adapted to humans, and others, like monkeypox, can be transmitted from species to species. All are highly contagious and usually cause lesions or rashes. Poxvirus infections occur in domestic hoofstock, including cattle, sheep, goats, camels, horses, and swine, and they have been reported in wild ungulates, including mountain sheep, mountain goats, reindeer, mule deer, musk-ox, caribou, moose, and white-tailed deer. In 1983, Mule deerpox virus, a genetically distinct pox virus, was found in free-ranging mule deer in Wyoming. Since the 1990s, several cases of mule deerpox virus have been reported from black-tailed deer from California and Oregon and a white-tailed deer from Mississippi, suggesting that this virus may be a potential emerging pathogen for white-tailed deer. It is unclear whether the virus is more prevalent or whether detection has increased.

Snow avalanches are a primary climate-linked driver of mountain ungulate populations

Snow is a major, climate-sensitive feature of the Earth’s surface and catalyst of fundamentally important ecosystem processes. Understanding how snow influences sentinel species in rapidly changing mountain ecosystems is particularly critical. Whereas effects of snow on food availability, energy expenditure, and predation are well documented, we report how avalanches exert major impacts on an ecologically significant mountain ungulate - the coastal Alaskan mountain goat (Oreamnos americanus). Using long-term GPS data and field observations across four populations (421 individuals over 17 years), we show that avalanches caused 23−65% of all mortality, depending on area. Deaths varied seasonally and were directly linked to spatial movement patterns and avalanche terrain use. Population-level avalanche mortality, 61% of which comprised reproductively important prime-aged individuals, averaged 8% annually and exceeded 22% when avalanche conditions were severe. Our findings reveal a widespread but previously undescribed pathway by which snow can elicit major population-level impacts and shape demographic characteristics of slow-growing populations of mountain-adapted animals.

Existing evidence on the effects of climate variability and climate change on ungulates in North America: a systematic map

BackgroundClimate is an important driver of ungulate life-histories, population dynamics, and migratory behaviors. Climate conditions can directly impact ungulates via changes in the costs of thermoregulation and locomotion, or indirectly, via changes in habitat and forage availability, predation, and species interactions. Many studies have documented the effects of climate variability and climate change on North America’s ungulates, recording impacts to population demographics, physiology, foraging behavior, migratory patterns, and more. However, ungulate responses are not uniform and vary by species and geography. Here, we present a systematic map describing the abundance and distribution of evidence on the effects of climate variability and climate change on native ungulates in North America.MethodsWe searched for all evidence documenting or projecting how climate variability and climate change affect the 15 ungulate species native to the U.S., Canada, Mexico, and Greenland. We searched Web of Science, Scopus, and the websites of 62 wildlife management agencies to identify relevant academic and grey literature. We screened English-language documents for inclusion at both the title and abstract and full-text levels. Data from all articles that passed full-text review were extracted and coded in a database. We identified knowledge clusters and gaps related to the species, locations, climate variables, and outcome variables measured in the literature.Review findingsWe identified a total of 674 relevant articles published from 1947 until September 2020. Caribou (Rangifer tarandus), elk (Cervus canadensis), and white-tailed deer (Odocoileus virginianus) were the most frequently studied species. Geographically, more research has been conducted in the western U.S. and western Canada, though a notable concentration of research is also located in the Great Lakes region. Nearly 75% more articles examined the effects of precipitation on ungulates compared to temperature, with variables related to snow being the most commonly measured climate variables. Most studies examined the effects of climate on ungulate population demographics, habitat and forage, and physiology and condition, with far fewer examining the effects on disturbances, migratory behavior, and seasonal range and corridor habitat.ConclusionsThe effects of climate change, and its interactions with stressors such as land-use change, predation, and disease, is of increasing concern to wildlife managers. With its broad scope, this systematic map can help ungulate managers identify relevant climate impacts and prepare for future changes to the populations they manage. Decisions regarding population control measures, supplemental feeding, translocation, and the application of habitat treatments are just some of the management decisions that can be informed by an improved understanding of climate impacts. This systematic map also identified several gaps in the literature that would benefit from additional research, including climate effects on ungulate migratory patterns, on species that are relatively understudied yet known to be sensitive to changes in climate, such as pronghorn (Antilocapra americana) and mountain goats (Oreamnos americanus), and on ungulates in the eastern U.S. and Mexico.

Epigenetic clocks, sex markers and age-class diagnostics in three harvested large mammals.

The development of epigenetic clocks, or the DNA methylation-based inference of age, is an emerging tool for ageing in free ranging populations. In this study, we developed epigenetic clocks for three species of large mammals that are the focus of extensive management throughout their range in North America: white-tailed deer, black bear and mountain goat. We quantified differential DNA methylation patterns at over 30,000 cytosine-guanine sites (CpGs) from tissue samples of all three species (black bear n = 49; white-tailed deer n = 47; mountain goat n = 45). We used a penalized regression model (elastic net) to build explanatory (black bear r = .95; white-tailed deer r = .99; mountain goat r = .97) and robust (black bear Median Absolute Error or MAE = 1.33; white-tailed deer MAE = 0.29; mountain goat MAE = 0.61) models of age or clocks. We also characterized individual CpG sites within each species that demonstrated clear differences in methylation levels between age classes and sex, which can be used to develop a suite of accessible diagnostic markers. This tool has the potential to contribute to wildlife monitoring by providing easily obtainable representations of age structure in managed populations.

Reconstructing mountain goat history in the Olympic Mountains, USA

AbstractBetween 1925 and 1930, 11 or 12 non‐native mountain goats (Oreamnos americanus) were translocated from Alaska and British Columbia to the foothills of the Olympic Range. By 1970, descendants of these goats had colonized the entire range and concerns about the management of this introduced species developed as damage to alpine soil and vegetation occurred. A series of removals reduced the population from 1175 in 1983 to 389 by 1990, eventually growing to 584 in 2016. We used demographic and genetic data to parameterize a population genetics individual‐based simulation model of the Olympic Range mountain goats. We calibrated the model to replicate the population trajectory for Olympic mountain goats from establishment in the 1920s through the 1983 first census. As expected, modeled population dynamics from 1928 to 1983 mimicked parameter initialization from expanding populations. However, simulated heterozygosity did not align with observations, suggesting a process not accounted for within the simulation model, such as a bottleneck or founder effect. Sensitivity analyses showed changes in annual reproductive rate, juvenile mortality, and adult female mortality influencing population trajectories, but variation in male mortality revealed no changes. Evaluating the population dynamics of the model after removals showed that approximately 80% of the total animals removed during the 1980s needed to be female in order for the observed population estimates to occur. This model has the potential to be used more widely with established or introduced mountain goat populations, as well as to provide an approach for studying other introduced species and their population dynamics.

Snow patch refugia benefits for species of periglacial zones-Evidence from a high-elevation obligate.

Conserving Earth's most rapidly changing biomes necessitates understanding biological consequences of altered climes. Past species- and taxa-level responses to warming environs include numerous concentrated extirpations at the southern peripheries of distributions during the late Pleistocene. Less clear are localized capacities of cold-adapted species to mitigate thermal challenges against warming temperatures, especially through proximate behavioral and physiological adjustments. Whereas snow patches persist in periglacial zones and elsewhere, broad reductions in seasonal snow raise concerns about how and why species continue to use them. If snow patches play a functional role to combat increasing thermal demands, we predicted individuals would display an array of autonomic responses to increased temperatures modulated by wind, ambient temperature, and winter fur on and away from snow patches. We tested these predictions using a mammalian exemplar of high latitude and high elevation, mountain goats (Oreamnos americanus), using two sites in the northern Rocky Mountains, USA. Surprisingly, and contrary to expectations of reduced thermal stress, respiration rates were not decreased on snow patches but use of snow was strongly correlated with decreased metrics of insect harassment. As snow cover continues to decline in montane environs, the persistence of cold-adapted species depends on navigating concurrent changes in biotic communities and thermal environments and balancing competing pressures on behavioral and biological responses.

Whole-genome SNP genotyping unveils ancestral and recent introgression in wild and domestic goats.

After the domestication of goats around 10,000 years before the present (BP), humans transported goats far beyond the range of their wild ancestor, the bezoar goat. This brought domestic goats into contact with many wild goat species such as ibex and markhor, enabling introgression between domestic and wild goats. To investigate this, while shedding light on the taxonomic status of wild and domestic goats, we analysed genome-wide SNP data of 613 specimens from 14 taxonomic units, including Capra hircus, C. pyrenaica, C. ibex (from Switzerland, Austria, Germany and Slovenia), C. aegagrus aegagrus, C. a. cretica, C. h. dorcas, C. caucasica caucasica, C. c. severtzovi, C. c. cylindricornis, C. falconeri, C. sibirica sibirica, C. s. alaiana and C. nubiana, as well as Oreamnos americanus (mountain goat) as an outgroup. To trace gene flow between domestic and wild goats, we integrated genotype data of local goat breeds from the Alps as well as from countries such as Spain, Greece, Türkiye, Egypt, Sudan, Iran, Russia (Caucasus and Altai) and Pakistan. Our phylogenetic analyses displayed a clear separation between bezoar-type and ibex-type clades with wild goats from the Greek islands of Crete and Youra clustered within domestic goats, confirming their feral origin. Our analyses also revealed gene flow between the lineages of Caucasian tur and domestic goats that most likely occurred before or during early domestication. Within the clade of domestic goats, analyses inferred gene flow between African and Iberian goats. The detected events of introgression were consistent with previous reports and offered interesting insights into the historical relationships among domestic and wild goats.

Assessing the impacts of recreation on the spatial and temporal activity of mammals in an isolated alpine protected area.

The management objectives of many protected areas must meet the dual mandates of protecting biodiversity while providing recreational opportunities. It is difficult to balance these mandates because it takes considerable effort to monitor both the status of biodiversity and impacts of recreation. Using detections from 45 camera traps deployed between July 2019 and September 2021, we assessed the potential impacts of recreation on spatial and temporal activity for 8 medium- and large-bodied terrestrial mammals in an isolated alpine protected area: Cathedral Provincial Park, British Columbia, Canada. We hypothesised that some wildlife perceive a level of threat from people, such that they avoid 'risky times' or 'risky places' associated with human activity. Other species may benefit from associating with people, be it through access to anthropogenic resource subsidies or filtering of competitors/predators that are more human-averse (i.e., human shield hypothesis). Specifically, we predicted that large carnivores would show the greatest segregation from people while mesocarnivores and ungulates would associate spatially with people. We found spatial co-occurrence between ungulates and recreation, consistent with the human shield hypothesis, but did not see the predicted negative relationship between larger carnivores and humans, except for coyotes (Canis latrans). Temporally, all species other than cougars (Puma concolor) had diel activity patterns significantly different from that of recreationists, suggesting potential displacement in the temporal niche. Wolves (Canis lupus) and mountain goats (Oreamnos americanus) showed shifts in temporal activity away from people on recreation trails relative to off-trail areas, providing further evidence of potential displacement. Our results highlight the importance of monitoring spatial and temporal interactions between recreation activities and wildlife communities, in order to ensure the effectiveness of protected areas in an era of increasing human impacts.

Endoparasitofauna of Altai mountain sheep (Ovis ammon ammon), Siberian mountain goats (Capra sibirica) and small cattle of the Saylyugemsky National Park, Altai Republic

The theriofaunal list of wild bovids of the South-Eastern Altai includes the Altai mountain sheep (Ovis ammon ammon), as well as the Siberian mountain goat (Capra sibirica). The predominant types of farm animals in the Altai Republic are goats and sheep. Parasite fauna and the interchange between wild bovids and small cattle in these areas is not well understood. Samples were taken by employees of the Sailyugemsky National Park. At the department, V.L. Yakimov, ovoscopic and larvoscopic research methods were carried out. The calculation of the average number of eggs was carried out using a VIGIS counting chamber (VNIIP named after K.I. Skryabin). According to the results obtained, an analysis of cross-invasion was carried out. In wild bovids from 120 samples studied and in small cattle from 31 samples, endoparasites belonging to four large taxonomic groups were found: protists, trematodes, cestodes, and nematodes. In wild bovids from the group of nematodes, invasion with eggs of the genus Trichuris was established, according to morphological and morphometric characteristics, eggs of the ascarid type were found, eggs of nematodes of the order Strongylida, the genus Marshallagia, Nematodirella, Nematodirus spp., as well as larvae of the genus Protostrongylus were also found. From the group of trematodes, eggs of the species Hasstilesia ovis, as well as Dicrocoelium sp. From the group of cestodes, eggs of the genus Moniezia sp. From the group of protists, oocysts of the genus Eimeria spp. In small cattle, in contrast to wild bovids, nematodes of the genus Strongyloides sp. The number of cases of detection in small cattle of the nematode of the genus Protostrongylus sp. significantly lower than in wild bovids, and eggs of the strongylid type were more common. Also, no eggs of the trematode of the genus Dicrocoelium sp. Otherwise, the endoparasite fauna was similar to wild bovids. This study will help to compile a complete picture of the parasite fauna and cross-invasion of wild bovids and small cattle.

Survival of adult mountain goats in Washington: effects of season, translocation, snow, and precipitation

AbstractElucidating patterns of adult survival rates is key to understanding population dynamics of large mammals. We used data from 7 separate studies of mountain goats (Oreamnos americanus) conducted from 2002 through 2022 in western Washington, USA, to quantify survival rates in relation to key biotic and abiotic factors using known fate models implemented in program MARK. We monitored 324 (206 females, 118 males) radio‐marked mountain goats for 178,339 days. A substantial number of mountain goats in our sample (n = 217) had been translocated from the Olympic Peninsula to the Cascade Mountains on Washington's mainland, providing an added opportunity to examine translocation effects. We adopted a sequential modeling approach, first building a set of models to examine fundamental survival patterns by age, sex, season, study area, and translocated status. We used variables retained from the top model in a second set to investigate relationships between annual survival and local weather covariates hypothesized by previous studies to influence mountain goat behavior, habitat selection, and vital rates. Survival among adult females in spring was slightly lower than other sex and age categories, but seasonal patterns were otherwise not evident. There were significant negative relationships between survival and winter snow depth, an index of the previous year's drought, and mean daily temperature during the previous May, and a positive relationship with previous year's precipitation. Weather effects were similar among resident and translocated animals. By the end of the study period, weather effects had evidently contributed to reductions in mountain goat survival to a level low enough that population stability was unlikely. Because the frequency of droughts and warm spring temperatures are expected to increase with climate change, mountain goat populations in Washington will likely be increasingly challenged as the atmosphere warms.

Contrasting whole-genome and reduced representation sequencing for population demographic and adaptive inference: an alpine mammal case study.

Genomes capture the adaptive and demographic history of a species, but the choice of sequencing strategy and sample size can impact such inferences. We compared whole genome and reduced representation sequencing approaches to study the population demographic and adaptive signals of the North American mountain goat (Oreamnos americanus). We applied the restriction site-associated DNA sequencing (RADseq) approach to 254 individuals and whole genome resequencing (WGS) approach to 35 individuals across the species range at mid-level coverage (9X) and to 5 individuals at high coverage (30X). We used ANGSD to estimate the genotype likelihoods and estimated the effective population size (Ne), population structure, and explicitly modelled the demographic history with δaδi and MSMC2. The data sets were overall concordant in supporting a glacial induced vicariance and extremely low Ne in mountain goats. We evaluated a set of climatic variables and geographic location as predictors of genetic diversity using redundancy analysis. A moderate proportion of total variance (36% for WGS and 21% for RADseq data sets) was explained by geography and climate variables; both data sets support a large impact of drift and some degree of local adaptation. The empirical similarities of WGS and RADseq presented herein reassuringly suggest that both approaches will recover large demographic and adaptive signals in a population; however, WGS offers several advantages over RADseq, such as inferring adaptive processes and calculating runs-of-homozygosity estimates. Considering the predicted climate-induced changes in alpine environments and the genetically depauperate mountain goat, the long-term adaptive capabilities of this enigmatic species are questionable.

Сhronology of the Karakiyasay II rock art

The article provides a brief description of the history of the study and characteristics of six large assem-blages with petroglyphs of the Karakiyasay complex, located on the southern slopes of the Karzhantau mountain ridge (North-Eastern Uzbekistan). Currently, about 600 stones and rock outcrops with more than 3700 images have been identified within the site. The most interesting is the organization of the pictorial series of one of the assemblages — Karakiyasay II, on the materials of which, using cluster, planigraphic and stratigraphic analyses, it was possible to carry out the chronological attribution of almost all images of this section of the complex. For this, the semantic units of the organization of the visual series of the assemblage were initially designated, including single and paired images, multi-figure “scenes” and plot compositions. Then, for the most numerous images — 169 figures of the Siberian mountain goat, by the means of measuring the figures and calculating the ratios of a various quan-tities characterizing the proportions of the design of body parts of the animals — the ratio of the body height, length of the legs, neck and head to the length of the body, as well as by introducing quantities containing nu-merical indicators of the way animals are depicted (number of horns, number of legs, turn of the figure, angle of the legs, angle of the neck) — nine quantitative characters were determined. The next stage is the cluster analy-sis, which allowed us to identify three clusters (groups) of similar figures of mountain goats. Since the data ob-tained in the first two clusters turned out to be heterogeneous, they were also subjected to cluster analysis, as a result of which it was possible to identify nine types of figures characterized by a number of similar features. Later, using the analysis of planigraphy and stratigraphy, the accuracy of the identified types was verified, their chrono-logical sequence was determined, and, based on the analogies with the manner of completion of figures in these types, the chronological attribution of the entire pictorial series of the site was carried out. The results of the study indicate that the petroglyphs in the Karakiyasay II assemblage were created mainly in the Late Bronze Age (the second half of the 2nd mil. BC — beginning of the 1st mil. BC) — Early Iron Age (7th c. BC — 4th c. AD).

Caprine Myostatin Gene Polymorphism in Domestic and Wild Goat Breeds in Duhok Province/Kurdistan Region of Iraq Using PCR-RFLP and SNP Markers

In Iraq generally and Kurdistan region specifically, goats are an important resource for meat and milk production. It is well known that Myostatin genes (MSTN) have the essential role in growth and development due to its crucial involvement in muscle growth. The goal of this research was to reveal the polymorphism of MSTN gene in different Capra hircus breeds (native, Shami, Meriz and Kamori goat) and in wild mountain goat (Capra aegagrus) via PCR-RFLP technique and direct seqencing The MSTN (exon 1) polymorphisms were investigated in all breeds, MSTN-Dra I/RFLP revealed three genotypes AA and BB were homozygous and AB was heterozygous. The calculated genotype frequencies were 0.270, 0.368 and 0.362 for AA, BB and AB genotype respectively. The allelic frequency was 0.451 for the A allele and 0.549 for the B allele. The average of the observed heterozygosity was 0.362 and the observed homozygosity was 0.638. The sequence data of MSTN gene of Native and Shami goats revealed 31 SNPs in nonfunctional region. In addition, in exon region there was 1 SNPs in both breed samples which did not change amino acid sequence and its silence mutation. In conclusion, the result of PCR-RFLP and SNP experiments obtained in this investigation were evaluated as very useful in genotype analysis of local goat breeds/populations. Thus, DNA polymorphisms in the Myostatin gene could be used as reliable genetic marker in breeding programs in this region.

Climate Change and Human Activities, the Significant Dynamic Drivers of Himalayan Goral Distribution (Naemorhedus goral).

The distribution of large ungulates is more often negatively impacted by the changing climate, especially global warming and species with limited distributional zones. While developing conservation action plans for the threatened species such as the Himalayan goral (Naemorhedus goral Hardwicke 1825; a mountain goat that mostly inhabits rocky cliffs), it is imperative to comprehend how future distributions might vary based on predicted climate change. In this work, MaxEnt modeling was employed to assess the habitat suitability of the target species under varying climate scenarios. Such studies have provided highly useful information but to date no such research work has been conducted that considers this endemic animal species of the Himalayas. A total of 81 species presence points, 19 bioclimatic and 3 topographic variables were employed in the species distribution modeling (SDM), and MaxEnt calibration and optimization were performed to select the best candidate model. For predicted climate scenarios, the future data is drawn from SSPs 245 and SSPs 585 of the 2050s and 2070s. Out of total 20 variables, annual precipitation, elevation, precipitation of driest month, slope aspect, minimum temperature of coldest month, slope, precipitation of warmest quarter, and temperature annual range (in order) were detected as the most influential drivers. A high accuracy value (AUC-ROC > 0.9) was observed for all the predicted scenarios. The habitat suitability of the targeted species might expand (about 3.7 to 13%) under all the future climate change scenarios. The same is evident according to local residents as species which are locally considered extinct in most of the area, might be shifting northwards along the elevation gradient away from human settlements. This study recommends additional research is conducted to prevent potential population collapses, and to identify other possible causes of local extinction events. Our findings will aid in formulating conservation plans for the Himalayan goral in a changing climate and serve as a basis for future monitoring of the species.

Genomic health is dependent on long-term population demographic history.

Current genetic methods of population assessment in conservation biology have been challenged by genome-scale analyses due to their quantitatively novel insights. These analyses include assessments of runs-of-homozygosity (ROH), genomic evolutionary rate profiling (GERP), and mutational load. Here, we aim to elucidate the relationships between these measures using three divergent ungulates: white-tailed deer, caribou, and mountain goat. The white-tailed deer is currently expanding, while caribou are in the midst of a significant decline. Mountain goats remain stable, having suffered a large historical bottleneck. We assessed genome-wide signatures of inbreeding using the inbreeding coefficient F and %ROH (FROH ) and identified evolutionarily constrained regions with GERP. Mutational load was estimated by identifying mutations in highly constrained elements (CEs) and sorting intolerant from tolerant (SIFT) mutations. Our results showed that F and FROH are higher in mountain goats than in caribou and white-tailed deer. Given the extended bottleneck and low Ne of the mountain goat, this supports the idea that the genome-wide effects of demographic change take time to accrue. Similarly, we found that mountain goats possess more highly constrained CEs and the lowest dN/dS values, both of which are indicative of greater purifying selection; this is also reflected by fewer mutations in CEs and deleterious mutations identified by SIFT. In contrast, white-tailed deer presented the highest mutational load with both metrics, in addition to dN/dS, while caribou were intermediate. Our results demonstrate that extended bottlenecks may lead to reduced diversity and increased FROH in ungulates, but not necessarily an increase in mutational load, probably due to the purging of deleterious alleles in small populations.

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Discovery of a Novel Species Infecting Goats: Morphological and Molecular Characterization of Babesia aktasi n. sp.

A novel Babesia sp. infecting goats was discovered based on the molecular findings obtained in the current study, which was conducted in the Mediterranean region of Türkiye. The goal of this study was to isolate this species of Babesia (Babesia sp.) infecting goats in vivo and to assess the genetic and morphological characterization of the parasite. To identify the animal naturally infected with Babesia sp. and isolate the parasite from this animal, field studies were conducted first, and genomic DNA were extracted from blood samples taken from goats (n = 50). The Theileria, Babesia, and Anaplasma species were identified using a nested PCR-based reverse line blotting (RLB) method. The study included one goat that was determined to be infected with Babesia sp. (single infection) in RLB for in vivo isolation. A blood smear was prepared to examine the parasite's morphology, but it was found to be negative microscopically. Following that, a splenectomy operation (to suppress the immune system) was performed to make the parasites visible microscopically in this animal. Parasitemia began after splenectomy, and the maximum parasitemia was determined to be 1.9%. The goat displayed no significant symptoms other than fever, loss of appetite, and depression. During a period when parasitemia was high, blood from this goat was inoculated into another splenectomized goat (Theileria-Babesia-Anaplasma-Mycoplasma spp. free). On the third day of inoculation, 10% parasitemia with high fever was detected in the goat, and on the fourth day, the goat was humanely euthanized due to severe acute babesiosis symptoms. Except for mild subcutaneous jaundice, no lesions were discovered during the necropsy. According to the microscopic measurement results, ring, double pyriform, spectacle-frame-like, and line forms were observed, and it was observed to be between 1.0-2.5 µm (1.38 ± 0.17 to 0.7 ± 0.21-all forms). A phylogenetic analysis and sequence comparison using the 18S rRNA and cox1 genes revealed that this species is distinct from the small ruminant Babesia species (18S rRNA 92-94%, cox1 79-80%) and has the highest similarity to Babesia sp. deer, which has been reported in deer. Furthermore, it was determined to resemble B. venatorum, B. divergens, Babesia sp. FR1 and Babesia sp. MO1 species, all of which are zoonotic. Additional research is needed to clarify the clinical status of this parasite in goats and other hosts (mountain goat, sheep, calf).