Molybdenum Oxotransferases Research Articles

Lewis Acid Assisted Nitrate Reduction with Biomimetic Molybdenum Oxotransferase Complex.

The reduction of nitrate (NO3-) to nitrite (NO2-) is of significant biological and environmental importance. While MoIV(O) and MoVI(O)2 complexes that mimic the active site structure of nitrate reducing enzymes are prevalent, few of these model complexes can reduce nitrate to nitrite through oxygen atom transfer (OAT) chemistry. We present a novel strategy to induce nitrate reduction chemistry of a previously known catalyst MoIV(O)(SN)2 (2), where SN = bis(4- tert-butylphenyl)-2-pyridylmethanethiolate, that is otherwise incapable of achieving OAT with nitrate. Addition of nitrate with the Lewis acid Sc(OTf)3 (OTf = trifluoromethanesulfonate) to 2 results in an immediate and clean conversion of 2 to MoVI(O)2(SN)2 (1). The Lewis acid additive further reacts with the OAT product, nitrite, to form N2O and O2. This work highlights the ability of Sc3+ additives to expand the reactivity scope of an existing MoIV(O) complex together with which Sc3+ can convert nitrate to stable gaseous molecules.

Acid-facilitated product release from a Mo(IV) center: relevance to oxygen atom transfer reactivity of molybdenum oxotransferases.

We report that pyridinium ions (HPyr+) accelerate the conversion of [Tp*MoIVOCl(OPMe3)] (1) to [Tp*MoIVOCl(NCCH3)] (2) by 103-fold, affording 2 in near-quantitative yield; Tp*=hydrotris(3,5-dimethyl-1-pyrazolyl)borate. This novel reactivity and the mechanism of this reaction were investigated in detail. The formation of 2 followed pseudo-first-order kinetics, with the observed pseudo-first-order rate constant (k obs) linearly correlated with [HPyr+]. An Eyring plot revealed that this HPyr+-facilitated reaction has a small positive value of ∆S ‡ indicative of a dissociative interchange (Id)mechanism, different from the slower associative interchange (Ia)mechanism in the absence of HPyr+ marked with a negative ∆S ‡. Interestingly, log(k obs) was found to be linearly correlated to the acidity of substituted pyridinium ions. This novel reactivity is further investigated using combined DFT and ab initio coupled cluster methods. Different reaction pathways, including Id, Ia, and possible alternative routes in the absence or presence of HPyr+, were considered, and enthalpy and free energies were calculated for each pathway. Our computational results further underscored that the Id route is energetically favored in the presence of HPyr+, in contrast with the preferred Ia-NNO pathway in the absence of HPyr+. Our computational results also revealed molecular-level details for the HPyr+-facilitated Id route. Specifically, HPyr+ initially becomes hydrogen-bonded to the oxygen atom of the Mo(IV)-OPMe3 moiety, which lowers the activation barrier for the Mo-OPMe3 bond cleavage in a rate-limiting step to dissociate the OPMe3 product. The implications of our results were discussed in the context of molybdoenzymes, particularly the reductive half-reaction of sulfite oxidase.

Light-Induced Activation of a Molybdenum Oxotransferase Model within a Ru(II)-Mo(VI) Dyad.

Nature uses molybdenum-containing enzymes to catalyze oxygen atom transfer (OAT) from water to organic substrates. In these enzymes, the two electrons that are released during the reaction are rapidly removed, one at a time, by spatially separated electron transfer units. Inspired by this design, a Ru(II)-Mo(VI) dyad was synthesized and characterized, with the aim of accelerating the rate-determining step in the cis-dioxo molybdenum-catalyzed OAT cycle, the transfer of an oxo ligand to triphenyl phosphine, via a photo-oxidation process. The dyad consists of a photoactive bis(bipyridyl)-phenanthroline ruthenium moiety that is covalently linked to a bioinspired cis-dioxo molybdenum thiosemicarbazone complex. The quantum yield and luminescence lifetimes of the dyad [Ru(bpy)2(L2)MoO2(solv)]2+ were determined. The major component of the luminescence decay in MeCN solution (τ = 1149 ± 2 ns, 67%) corresponds closely to the lifetime of excited [Ru(bpy)2(phen-NH2)]2+, while the minor component (τ = 320 ± 1 ns, 31%) matches that of [Ru(bpy)2(H2-L2)]2+. In addition, the (spectro)electrochemical properties of the system were investigated. Catalytic tests showed that the dyad-catalyzed OAT from dimethyl sulfoxide to triphenyl phosphine proceeds significantly faster upon irradiation with visible light than in the dark. Methylviologen acts as a mediator in the photoredox cycle, but it is regenerated and hence only required in stoichiometric amounts with respect to the catalyst rather than sacrificial amounts. It is proposed that oxidative quenching of the photoexcited Ru unit, followed by intramolecular electron transfer, leads to the production of a reactive one-electron oxidized catalyst, which is not accessible by electrochemical methods. A significant, but less pronounced, rate enhancement was observed when an analogous bimolecular system was tested, indicating that intramolecular electron transfer between the photosensitizer and the catalytic center is more efficient than intermolecular electron transfer between the separate components.

The molybdenum oxotransferases and related enzymes

A perspective is provided of recent advances in our understanding of molybdenum-containing enzymes other than nitrogenase, a large and diverse group of enzymes that usually (but not always) catalyze oxygen atom transfer to or from a substrate, utilizing a Mo=O group as donor or acceptor. An emphasis is placed on the diversity of protein structure and reaction catalyzed by each of the three major families of these enzymes.

Mechanistic Insight into the Reactivity of Oxotransferases by Novel Asymmetric Dioxomolybdenum(VI) Model Complexes

The asymmetric molybdenum(VI) dioxo complexes of the bis(phenolate) ligands 1,4-bis(2-hydroxybenzyl)-1,4-diazepane, 1,4-bis(2-hydroxy-4-methylbenzyl)-1,4-diazepane, 1,4-bis(2-hydroxy-3,5-dimethylbenzyl)-1,4-diazepane, 1,4-bis(2-hydroxy-3,5-di-tert-butylbenzyl)-1,4-diazepane, 1,4-bis(2-hydroxy-4-flurobenzyl)-1,4-diazepane, and 1,4-bis(2-hydroxy-4-chlorobenzyl)-1,4-diazepane (H(2)(L1)-H(2)(L6), respectively) have been isolated and studied as functional models for molybdenum oxotransferase enzymes. These complexes have been characterized as asymmetric complexes of type [MoO(2)(L)] 1-6 by using NMR spectroscopy, mass spectrometry, elemental analysis, and electrochemical methods. The molecular structures of [MoO(2)(L)] 1-4 have been successfully determined by single-crystal X-ray diffraction analyses, which show them to exhibit a distorted octahedral coordination geometry around molybdenum(VI) in an asymmetrical cis-β configuration. The Mo-O(oxo) bond lengths differ only by ≈0.01 Å. Complexes 1, 2, 5, and 6 exhibit two successive Mo(VI)/Mo(V) (E(1/2), -1.141 to -1.848 V) and Mo(V)/Mo(IV) (E(1/2), -1.531 to -2.114 V) redox processes. However, only the Mo(VI)/Mo(V) redox couple was observed for 3 and 4, suggesting that the subsequent reduction of the molybdenum(V) species is difficult. Complexes 1, 2, 5, and 6 elicit efficient catalytic oxygen-atom transfer (OAT) from dimethylsulfoxide (DMSO) to PMe(3) at 65 °C at a significantly faster rate than the symmetric molybdenum(VI) complexes of the analogous linear bis(phenolate) ligands known so far to exhibit OAT reactions at a higher temperature (130 °C). However, complexes 3 and 4 fail to perform the OAT reaction from DMSO to PMe(3) at 65 °C. DFT/B3LYP calculations on the OAT mechanism reveal a strong trans effect.

Experimental and theoretical study of a truly functional biomimetic molybdenum oxotransferase analogue system

Density functional theory (DFT) computations at the B3LYP/Lanl2DZ level were used to elucidate the oxygen atom transfer (OAT) and coupled electron proton transfer (CEPT) reaction steps involved in the biomimetic catalytic cycle performed by polymer-supported Mo VIO2(NN')(2) complexes [NN'=phenyl-(pyrrolato-2-ylmethylene)-amine] with water as oxygen source, trimethyl-phosphane as oxygen acceptor and one-electron oxidising agents. The DFT method employed has been validated against experimental data [X-ray crystal structures of a NN' ligand and a Mo VIO2(NN')2 complex as well as kinetic data]. The rate-limiting step in the forward-OAT from [Mo VIO2] to PMe3 is the attack of PMe3 at an oxo ligand with DeltaG not equal (298 K)=64.6 kJ mol(-1). Dissociation of the product OPMe3 is facile with DeltaG( not equal) (298 K)=26.3 kJ mol(-1) giving a mono-oxo [Mo IVO] complex which fills its coordination sphere with a further PMe3 substrate with DeltaG not equal (298 K)=39.2 kJ mol(-1). One-electron oxidation to a Mo(V) phosphane complex precedes the coordination of water/hydroxide. Additionally, the comproportionation of [Mo VIO(2)] and [Mo IVO] to dinuclear oxo-bridged [O=MoV-O-MoV=O] species has been calculated as the thermodynamic sink in this system and the back-OAT from dmso to mono-oxo [Mo IVO] to give [Mo VIO2] has been shown to involve an equilibrium between stereoisomeric [Mo VIO2] complexes with an activation barrier of DeltaG not equal (298 K)=113.1 kJ mol(-1).

Polymer‐Supported Dioxido‐MoVI Complexes as Truly Functional Molybdenum Oxotransferase Model Systems

AbstractA truly functional model system for molybdenum oxotransferases provides evidence for all biologically realistic intermediates, namely mononuclear MoVI, MoV and MoIV species. Dinucleation to EPR‐silent [MoV2O3] species prevailing in homogeneous solution is suppressed by immobilising the active species to a polymeric support by two‐point attachment.(© Wiley‐VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2007)

Synthesis and characterization of molybdenum oxo complexes of two tripodal ligands: reactivity studies of a functional model for molybdenum oxotransferases

Reaction of the tetradentate ligand N-(2-hydroxybenzyl)-N,N-bis(2-pyridylmethyl)amine (L-OH) with MoO2Cl2 in methanol in the presence of NaOMe and PF6- results in the formation of [MoO2(L-O)]PF6. Similarly, the reaction of N-(2-mercaptobenzyl)-N,N-bis(2-pyridylmethyl)amine (L-SH) with MoO2(acac)2 leads to the formation of [MoO2(L-S)]+. The dioxo-molybdenum complex [MoO2(L-O)]+ reacts with phosphines in methanol to afford phosphine oxides and an air-sensitive molybdenum complex, tentatively identified as [Mo(IV)O(L-O)(OCH3)]. The latter complex is capable of reducing biological oxygen donors such as DMSO or nitrate, thereby mimicking the activity of DMSO reductase and nitrate reductase. Reaction of [MoO2(L-O)]PF6 with PPh3 in other solvents than methanol leads to the formation of the Mo(V) dimer [(L-O)OMo(micro-O)MoO(L-O)](PF6)2. The crystal structures of [MoO2(L-O)]PF6 and the micro-oxo bridged dimer are presented.

Synthesis, Structure, and Reactivity of a New Mononuclear Molybdenum(VI) Complex Resembling the Active Center of Molybdenum Oxotransferases

AbstractThe design, synthesis, and structure determination of a pentacoordinate square‐pyramidal molybdenum(VI) complex MoO2L (where LH2 is a diacidic tridentate ONO donor ligand) is reported. The substrate binding capacity of MoO2L has been demonstrated by the formation and isolation of six‐coordinate octahedral complexes [MoO2L(B)] (where B = imidazole, 1‐methylimidazole, pyridine, or γ‐picoline) and the structures of [MoO2L(Imz)] and [MoO2L(Py)] have been solved by X‐ray crystallography. Oxo transfer of MoO2L to the substrate PPh3 has been demonstrated by the formation of MoOL and [MoOL(bipy)]. Thus, the complex MoO2L behaves as a model for the active center of oxotransfer molybdoenzymes and is of interest in bioinorganic chemistry. (© Wiley‐VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2003)

A theoretical study of the primary oxo transfer reaction of a dioxo molybdenum(VI) compound with imine thiolate chelating ligands: a molybdenum oxotransferase analogue.

The reaction mechanism of an analogue system of the molybdenum oxotransferases was investigated at the density functional (B3P86) level of theory. Kinetic measurements by Schultz and Holm suggest that the reaction MoO(2)(t-BuL-NS)(2) + X --> MoO(t-BuL-NS)(2) + OX (t-BuL-NS = bis(4-tert-butylphenyl)-2-pyridylmethanethiolate(1-)) occurs through an associative transition state. Our results on the model reaction, MoO(2)(SCH(2)CHNH)(2) + P(CH(3))(3) --> MoO(SCH(2)CHNH)(2) + OP(CH(3))(3), support this hypothesis, and indicate that this reaction proceeds through a two-step mechanism via an associative intermediate. The DeltaH(++) for the first, and rate-determining, step was predicted to be 9.4 kcal/mol, and DeltaH(++) for the second step (release of the OP(CH(3))(3) product) was predicted to be 3.3 kcal/mol. These results are in good agreement with the experimental system, for which the rate determining DeltaH(++) = 9.6(6) kcal/mol. Shultz and Holm's experimental model undergoes a significant ligand rearrangement in the oxo transfer reaction: the reactant, MoO(2)(t-BuL-NS)(2), has a trans-S arrangement of the ligands, while the product, MoO(t-BuL-NS)(2), has a trans-N arrangement. To investigate the driving force behind the ligand rearrangement, four model compounds, that systematically removed the unsaturation at the N and the chelate character of the ligands, were modeled at the B3P86 level of theory. For all models of the dioxo species, the trans-N isomer was higher in energy than the trans-S isomer. The analysis of these results indicated that a trans influence accounts for approximately 16% of the energy difference, the unsaturation at the nitrogens accounts for approximately 26%, and the ring strain from the chelator accounts for approximately 58% of the energy difference between the two isomers (trans-N and trans-S). For all models of the monooxo species, only the trans-N species was a stable geometry. Therefore, for the reverse oxo transfer reaction, ligand rearrangement must occur after or during the attack of the OX substrate.

Resonance Raman as a direct probe for the catalytic mechanism of molybdenum oxotransferases

Recent studies of human sulfite oxidase and Rhodobacter sphaeroides DMSO reductase have demonstrated the ability of resonance Raman to probe in detail the coordination environment of the Mo active sites in oxotransferases via Mo=O, Mo-S(dithiolene), Mo-S(Cys) or Mo-O(Ser), dithiolene chelate ring and bound substrate vibrations. Furthermore, the ability to monitor the catalytically exchangeable oxo group via isotopic labeling affords direct mechanistic information and structures for the catalytically competent Mo(IV) and Mo(VI) species. The results clearly demonstrate that sulfite oxidase cycles between cis–di-oxo-Mo(VI) and mono-oxo-Mo(IV) states during catalytic turnover, whereas DMSO reductase cycles between mono-oxo-Mo(VI) and des-oxo-Mo(IV) states. In the case of DMSO reductase, 18O-labeling experiments have provided the first direct evidence for an oxygen atom transfer mechanism involving an Mo=O species. Of particular importance is that the active-site structures and detailed mechanism of DMSO reductase in solution, as determined by resonance Raman spectroscopy, are quite different to those reported or deduced in the three X-ray crystallographic studies of DMSO reductases from Rhodobacter species.

Dimethylsulfide:acceptor oxidoreductase from Rhodobacter sulfidophilus. The purified enzyme contains b-type haem and a pterin molybdenum cofactor.

Dimethylsulfide:receptor oxidoreductase was purified from the purple non-sulfur phototrophic bacterium Rhodobacter sulfidophilus. The native form of the enzyme had a molecular mass of 152 kDa and was composed of three distinct subunits of 94, 38 and 32 kDa. Dimethylsulfide:acceptor oxidoreductase did not oxidise other thioethers which were tested. The enzyme was able to reduce a variety of N-oxides using reduced methylviologen as electron donor but it reduced dimethylsulfoxide at a very low rate. The resting form of dimethylsulfide:acceptor oxidoreductase exhibited a spectrum which was characteristic of a reduced cytochrome with absorbance maxima at 562 nm, 533 nm and 428 nm. Pyridine haemochrome analysis established that the cytochrome contained a b-type haem and a content of 0.65 mol protohaem/mol enzyme was determined. After oxidation of the haem with ferricyanide, the absorbance spectrum of the reduced cytochrome was restored by reduction with dimethylsulfide. Metal analysis revealed that dimethylsulfide:acceptor oxidoreductase contained 0.5 mol Mo and 3.5 mol Fe/mol enzyme. Heat treatment of the enzyme released material with fluorescence excitation and emission spectra which were characteristic of form B of the pterin component of the pterin molybdenum cofactor. From this analysis it is concluded that dimethylsulfide:acceptor oxidoreductase is a molybdenum oxotransferase which may also contain a iron-sulfur cluster. It is suggested that the haem and pterin molybdenum cofactor are associated with the 94-kDa subunit.

Preliminary crystallographic studies of dimethylsulfoxide reductase from Rhodobacter capsulatus.

Dimethylsulfoxide reductase from the photosynthetic bacterium Rhodobacter capsulatus has been crystallized in two similar forms which are suitable for X-ray structure determination. Both crystals forms belong to space group P4(1)22 or P4(3)22, with cell dimensions a = b = 80.81, c = 229.75 A (type I crystals) or a = b = 89.30, c = 230.05 A (type II crystals) and one molecule in the asymmetric unit. Diffraction has been observed to at least 2.0 A in type I crystals and to 2.6 A in type II crystals. Dimethylsulfoxide reductase from Rhodobacter is the simplest molybdenum oxotransferase known and this makes it an ideal model to study the structure and function of this class of enzymes.

Kinetics of oxygen atom transfer in an analog reaction system of the molybdenum oxotransferases

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTKinetics of oxygen atom transfer in an analog reaction system of the molybdenum oxotransferasesBrian E. Schultz and R. H. HolmCite this: Inorg. Chem. 1993, 32, 20, 4244–4248Publication Date (Print):September 1, 1993Publication History Published online1 May 2002Published inissue 1 September 1993https://doi.org/10.1021/ic00072a016RIGHTS & PERMISSIONSArticle Views220Altmetric-Citations63LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InReddit PDF (643 KB) Get e-Alerts Get e-Alerts

ChemInform Abstract: Molybdenum‐Mediated Oxygen Atom Transfer: An Improved Analogue Reaction System of the Molybdenum Oxotransferases.

AbstractChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.

Molybdenum-mediated oxygen-atom transfer: an improved analog reaction system of the molybdenum oxotransferases

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTMolybdenum-mediated oxygen-atom transfer: an improved analog reaction system of the molybdenum oxotransferasesBrian E. Schultz, Stephen F. Gheller, Mark C. Muetterties, Michael J. Scott, and R. H. HolmCite this: J. Am. Chem. Soc. 1993, 115, 7, 2714–2722Publication Date (Print):April 1, 1993Publication History Published online1 May 2002Published inissue 1 April 1993https://doi.org/10.1021/ja00060a021RIGHTS & PERMISSIONSArticle Views902Altmetric-Citations129LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InReddit PDF (1 MB) Get e-AlertsSupporting Info (4)»Supporting Information Supporting Information Get e-Alerts

A broad-substrate analog reaction system of the molybdenum oxotransferases

A broad-substrate analog reaction system of the molybdenum oxotransferases

A conserved cysteine in molybdenum oxotransferases.

The amino acid sequences of peptides derived from rat hepatic sulfite oxidase have been determined by a combination of amino acid analysis and Edman degradation of the purified protein. The data obtained showed the rat liver enzyme contained 3 cysteine residues which was confirmed by thiol modification studies using 4,4'-dithiodipyridine of the native enzyme. Combining these data with that previously published for chicken liver sulfite oxidase (Neame, P. J., and Barber, M. J. (1989) J. Biol. Chem. 264, 20894-20901) indicates that 2 cysteines (Cys186 and Cys430, based upon the numbering for the chicken sequence) are conserved in both chicken and rat liver enzymes with all the cysteine residues being present in the molybdenum-containing domain. Further comparison of the sequences of the molybdenum domains of rat and chicken liver sulfite oxidase with the amino acid sequences published for the molybdenum domains of a variety of assimilatory nitrate reductases suggests that only a single cysteine residue (Cys186) is conserved in all these enzymes, indicating that it may play a role in the binding of Mo-pterin to the protein.

Toward functional models of metalloenzyme active sites: analog reaction systems of the molybdenum oxo transferases

Toward functional models of metalloenzyme active sites: analog reaction systems of the molybdenum oxo transferases

Thiol as an electron donor in molybdenum oxo-transferase analog reaction systems: observations by fluorine-19 NMR spectroscopy and biological implications

Thiol as an electron donor in molybdenum oxo-transferase analog reaction systems: observations by fluorine-19 NMR spectroscopy and biological implications