Migratory Birds Research Articles

Comparing winter distribution and harvest rates of transmitter‐marked and banded‐only mallards in western Tennessee

AbstractThe miniaturization of Global Positioning Systems (GPS) transmitters is providing insights into the ecology and management of migratory bird species at biologically‐relevant spatial scales. However, transmitters and their attachment methods could bias inferred behaviors, demographic rates, and resulting management decisions. We evaluated the effects of external harness‐style GPS transmitters by comparing direct harvest rates, winter dispersal distances, and subsequent harvest distributions of mallards (Anas platyrhynchos) equipped with GPS transmitters (n = 443) to a tarsal banded‐only control group (n = 1,123) captured in western Tennessee during winters 2019–2022. We found that transmitter‐marked mallards had similar harvest rates, winter dispersal distances, and harvest distributions as banded‐only mallards. Time between capture and harvest predicted dispersal distances but there was no effect of marker type. Specifically, the average time from capture to harvest was 30 (SE = 2) and 31 (SE = 3) days for banded‐only and transmitter‐marked mallards, respectively. Harvest rate () was only 2.2% greater for transmitter‐marked mallards compared to banded‐only mallards overall, but GPS transmitters affected harvest susceptibility of juveniles ( = 14.5%). Based on harvest rates and dispersal distances between transmitter‐marked and banded‐only cohorts, we suggest 7‐ to 10‐day data censoring periods may be warranted, especially for juveniles, as mallards acclimate to GPS transmitters. Overall, we concluded that modern harness‐style GPS transmitters provided reliable information of wintering mallard space use, movements, and harvest mortality and can be used to inform ecology and management of wintering mallards and other dabbling ducks. Future studies should evaluate effects of harness‐style GPS transmitters for other species and during different portions of dabbling ducks' life cycle, such as migration or nesting, when they may experience greater adverse effects.

Global Dynamics of Bird Migration: Trends, Mechanisms and Conservation Challenges

Global bird migration is a complex phenomenon influenced by a multitude of factors, including climate change, habitat loss, and human activities. This paper explores the trends in migratory patterns observed over recent decades, highlighting shifts in timing, routes, and species distributions Bird migrations are behavioural occurrences, exemplifying intricate spatiotemporal tactics to optimise living expenses while enhancing fitness. Birds express a range of migratory patterns, from highly predictable obligate migration, to less predictable nomadic and fugitive migrations. Despite significant advancements in bird migration studies, still certain essential gaps remain. Due to technological advancement, bird migration studies have uncovered significant insights into the behavioural, cognitive, physiological, and evolutionary underpinnings. The seasonal variability of bird populations presents an intriguing phenomenon for avid observers to discern their origins, migratory routes, and return patterns. Among the remarkable migrations executed by several species of fish, animals, and insects, birds exemplify the highest degree of mobility among all living forms on Earth. This paper gives reasons for all Bird migration strategies with a view toward the preservation of Bird ecosystems and assurance of Environmental sustainability.

Review of Lyme Borreliosis in Africa—An Emerging Threat in Africa

Lyme borreliosis (LB) is more common in the Northern Hemisphere. It is endemic mainly in North America, where the vectors are Ixodes scapularis and Ixodes pacificus, and in Eurasia, where the vectors are Ixodes ricinus and Ixodes persulcatus. Both tick-borne diseases and LB are influenced by climate change. Africa and South America are crossed by the equator and are situated in both the Northern and Southern Hemispheres. In Africa, the LB is present on the Mediterranean and the Indian Ocean coasts. Borrelia lusitaniae is prevalent in countries bordering the Mediterranean Sea, such as Tunisia, Morocco, Algeria, and Egypt. Ticks were detected in the Ixodes Ricinus, which are carried by migratory birds and the Ixodes inopinatus and captured by the Psammodromus algirus lizards. The Borreliae Lyme Group (LG) and, in particular, Borrelia garinii, have been reported in countries bordering the Indian Ocean, such as Kenya, Tanzania, and Mozambique, transported by migratory birds from North African countries, where the vector was identified as Hyalomma rufipes ticks. This review aims to document the presence of Borreliae LG and LB in Africa.

Using mercury and lead stable isotopes to assess mercury, lead, and trace metal source contributions to Great Salt Lake, Utah, USA

Great Salt Lake is a critical habitat for migratory birds that is threatened by elevated metal concentrations, including mercury (Hg) and lead (Pb), and is subject to severe hydrologic changes, such as declining lake level. When assessing metal profiles recorded in Great Salt Lake sediment, a large data gap exists regarding the sources of metals within the system, which is complicated by various source inputs to the lake and complex biogeochemistry. Here, we leverage Hg and Pb stable isotopes to track relative changes in metal source contributions to Great Salt Lake over time. Mercury and Pb concentrations increase in sediments deposited after 1920 and peak between 1965 and 1995, following closure of several local smelters and the onset of increased emission controls. The nominal associations above are confirmed via Hg stable isotopes in pre-1920 background sediments, which reflect atmospheric inputs from regional and global origin, whereas Hg and Pb stable isotopes together indicate that elevated metal concentrations in mid-late 20th century sediments reflect increased mining/smelting inputs. The observed minimal rebound towards pre-1920 Pb isotope signatures in 21st century sediments indicates that mining/smelting inputs, though reduced, remain a primary source of Pb to Great Salt Lake. In contrast, the more pronounced rebound of Hg stable isotope signatures to pre-1920 values indicate a greater contribution of atmospheric inputs of regional/global origin to current Hg inputs, though Hg concentrations are ~10 times greater than pre-1920 background values due to global increases in atmospheric Hg concentrations or possibly slow recovery from local contamination. The importance of regional/global Hg sources to the system suggests that reductions in Hg bioaccumulation in the open water food webs of Great Salt Lake are more dependent on national and global reductions in Hg emissions and management strategies to limit methylmercury production within system. This work highlights the utility of using coupled Hg and Pb stable isotope values to assess trace metal pollution sources and pathways in aquatic systems.

Evaluation of methods to estimate nocturnal bird migration activity: C comparison of radar and nocturnal flight call monitoring in the American West

Evaluation of methods to estimate nocturnal bird migration activity: C comparison of radar and nocturnal flight call monitoring in the American West

Virulence and Antimicrobial Resistance Patterns of Salmonella spp. Recovered From Migratory and Captive Wild Birds.

Salmonella spp., especially those are resistant to extended-spectrum β-lactamase (ESBL), are considered as major concern to global health due to their emergence and dissemination. The aim of this study was to investigate the virulence and antimicrobial resistance (AMR) profile of Salmonella spp. from migratory and captive wild birds. A total 262 faecal samples were collected, and the identification of Salmonella spp. was carried out using a standard culture and PCR as well as molecular detection of virulence and AMR genes. The overall prevalence of Salmonella was determined to be 30.92% (95% CI = 25.63-36.75). Migratory birds exhibited highest prevalence (38.10%), whereas wild birds in captivity showed a lower prevalence (23.40%). The agfA gene was detected at a higher rate at 24.69%. Salmonella spp. exhibited 100% resistance to tetracycline, followed by 58% ampicillin and 46% streptomycin. In addition, there was a resistance rate to ceftriaxone of 17% and to colistin sulphate of 25%. Interestingly, levofloxacin alone displayed 100% sensitivity across all isolates, while ciprofloxacin and azithromycin showed 73% and 64% sensitivity, respectively. The MAR index was 0.25 and 0.42, and 74.07% of all isolates showed multidrug resistance (MDR). It was shown that migratory and captive wild birds contained ESBL genes blaTEM (94.34% and 49.06%) and blaSHV (13.33% and 10%), respectively. Genes responsible for sulphonamide (sul1) resistance were detected in 13.33% and 79% of wild and migratory birds, respectively. Salmonella has been found in captive wild and migratory birds and could act as reservoirs for the transmission of MDR and ESBL bacteria.

Gut microbiota and antibiotic resistance genes in endangered migratory Scaly-sided merganser (Mergus squamatus) in northeast China

Studying the diversity of gut microbiota and antibiotic resistance genes (ARGs) in endangered migratory birds, as well as their responses to different environments, can reflect the health status of migratory birds and the ecological risk of ARG transmission. The globally endangered Scaly-sided merganser (Mergus squamatus) is a typical migratory bird, yet the diversity of its intestinal microbiota and ARGs has not been reported. In this study, fecal samples were collected from two major riparian foraging areas utilized by M. squamatus in the Changbai Mountains of China: the Lushui River and the Manjiang River. The gut microbiota and ARG composition were characterized using 16S rRNA amplicon and metagenomic sequencing. The results indicated that the relative abundance of gut microbiota in the two habitats differed significantly, but the core flora was similar. Moreover, the relative abundance of pathogenic bacteria was high, suggesting that M. squamatus faces a high risk of disease. A total of 382 ARGs were identified, which were primarily resistant to multidrug, tetracycline, macrolides-lincosamides-streptogramins, and mupirocin. MsbA, abcA, rpoB2, and tetT were the most abundant shared ARGs between the two sites. The findings demonstrate that habitat influences the diversity of gut microbiota and ARGs in the endangered migratory M. squamatus. This species could serve as a reservoir for pathogenic bacteria and ARGs. Therefore, monitoring the diversity of gut microbiota and ARGs in M. squamatus across different habitats is essential for a comprehensive assessment of its health status and the ecological risk of ARG transmission in the future.

Emergence of highly pathogenic avian influenza viruses H5N1 and H5N5 in white-tailed eagles, 2021-2023.

Highly pathogenic avian influenza (HPAI) poses a substantial threat to several raptors. Between 2021 and 2023, HPAI viruses (HPAIVs) of the Goose/Guangdong lineage H5 clade 2.3.4.4b became widespread in wild birds in Norway, and H5N1 and H5N5 viruses were detected in 31 white-tailed eagles (Haliaeetus albicilla, WTEs). Post-mortem examinations of four WTEs revealed no macroscopic pathological findings. Microscopic examinations showed the presence of myocardial and splenic necroses and a few lesions in the brain. In situ hybridization revealed the presence of the virus in several organs, suggesting a multisystemic infection. The detection of HPAIV H5N5 in a WTE in February 2022 marked the first recorded occurrence of this subtype in Norway. Since then, the virus has persisted, sporadically being detected in WTEs and other wild bird species. Phylogenetic analyses reveal that at least two distinct incursions of HPAIV H5N1 Eurasian (EA) genotype C affected WTEs, likely introduced by migratory birds from Eurasia and seabirds entering from Western and Central Europe. Some WTE isolates from 2021 to 2022 clustered with those from Canada and Ireland, aligning with the transatlantic spread of H5N1. Others were related to the 2021 mass mortality of great skuas in the UK or outbreaks in seabird populations, including gannets, gulls and terns, during 2022 in the North Sea region. This suggests that the WTEs were likely preying on the affected birds. Our study highlights that WTEs can act as sentinels for some HPAIV strains, but the absence of several known circulating genotypes in WTEs suggests varying pathogenic effects on this species.

Integrated Assessment of Survival, Movement, and Reproduction in Migratory Birds: A Study on Evaluating Reinforcement Success

Conservation managers increasingly employ reinforcement techniques to bolster declining populations by reintroducing non-wild individuals born in captivity into natural habitats, but success rates remain modest. In this study, the success is evaluated of reinforcement efforts using satellite tracking and field observation data collected between 2010 and 2021. It focuses on 13 non-wild individuals, as follows: seven red-crowned cranes Grus japonensis, two white-naped cranes Antigone vipio, and four demoiselle cranes Anthropoides virgo, as well as five wild individuals including two red-crowned cranes and three white-naped cranes. The assessment criteria included survival, movement, and reproduction, utilizing a comprehensive scoring method. The scoring process indicates that more timely field observation records and the movement pattern scoring combining models and trajectories can improve the accuracy of estimation. From the results, although wild individuals generally achieve higher scores across these metrics, statistical differences were not significant possibly due to limited sample size. Notably, non-wild individuals frequently displayed residence, nomadic, or abnormal migration. In addition, field observations underscored the benefits of pairing non-wild individuals with their wild counterparts to enhance migration success. So in order to enhance migration success, it is advisable to release non-wild individuals approaching sexual maturity in proximity to wild subadult flocks during the breeding or summering periods. Additionally, during the overwintering phase, these individuals should be released in areas where wild populations are concentrated.

Genetic and pathogenic potential of highly pathogenic avian influenza H5N8 viruses from live bird markets in Egypt in avian and mammalian models

Since its first isolation from migratory birds in Egypt in 2016, highly pathogenic avian influenza (HPAI) H5N8 has caused several outbreaks among domestic poultry in various areas of the country affecting poultry health and production systems. However, the genetic and biological properties of the H5N8 HPAI viruses have not been fully elucidated yet. In this study, we aimed to monitor the evolution of circulating H5N8 viruses and identify the pathogenicity and mammalian adaptation in vitro and in vivo. Three H5N8 HPAI viruses were used in this study and were isolated in 2021–2022 from poultry and wild birds during our routine surveillance. RNA extracts were subjected to full genome sequencing. Genetic, phylogenetic, and antigenic analyses were performed to assess viral characteristics and similarities to previously isolated viruses. Phylogenetic analysis showed that the hemagglutinin genes of the three isolates belonged to clade 2.3.4.4b and grouped with the 2019 viruses from G3 with high similarity to Russian and European lineages. Multiple basic amino acids were observed at cleavage sites in the hemagglutinin proteins of the H5N8 isolates, indicating high pathogenicity. In addition, several mutations associated with increased virulence and polymerase activity in mammals were observed. Growth kinetics assays showed that the H5N8 isolate is capable of replicating efficiently in mammalian cells lines. In vivo studies were conducted in SPF chickens (White Leghorn), mice, and hamsters to compare the virological characteristics of the 2022 H5N8 isolates with previous H5N8 viruses isolated in 2016 from the first introduction. The H5N8 viruses caused lethal infection in all tested chickens and transmitted by direct contact. However, we showed that the 2016 H5N8 virus causes a higher mortality in chickens compared to 2022 H5N8 virus. Moreover, the 2022 virus can replicate efficiently in hamsters and mice without preadaptation causing systemic infection. These findings underscore the need for continued surveillance of H5 viruses to identify circulating strains, determine the commercial vaccine’s effectiveness, and identify zoonotic potential.

Different migration patterns of Wahlberg's eagles Hieraaetus wahlbergi across Africa

Intra‐Africa movements of most African migratory birds remain an enigma. We describe the migrations of Wahlberg's eagle Hieraaetus wahlbergi using GPS‐GSM transmitters on adult eagles in their South African (n = 3) and Kenyan (n = 7) breeding areas between 2018 and 2022. The dataset included 57 migratory tracks, 29 post‐breeding and 28 pre‐breeding. We found long‐distance migrants (LDMs; from South Africa) and short‐distance migrants (SDMs; from Kenya) using common non‐breeding areas centered in the Sudans and Central African Republic. The timing of annual phases was similar, but LDMs departed on their pre‐breeding migration on average later than SDMs (13 August versus 31 July) and arrived later on their breeding grounds (13 September versus 10 August). Conversely, the average departure date on the post‐breeding migration was 4 April for SDM and 23 March for LDMs. LDMs spent significantly less time of the year than SDMs on breeding grounds (44 versus 57%), and slightly but not significantly more time (40 versus 38%) on non‐breeding areas. The post‐breeding migration distance was on average 3413.9 ± 170.9 km for LDMs and 491.9 ± 158.5 km for SDMs. At non‐breeding areas, LDMs reached more northerly latitudes than SDMs, increasing the pre‐breeding migration distance to 4495.9 ± 372.5 km for LDMs versus 1701.9 ± 167.3 for SDMs. Daily flight distances back to the breeding areas averaged 153.4 ± 130.3 km for LDMs and 167.4 ± 122.3 km for SDMs and to non‐breeding areas were shorter for SDMs (124.8 ± 113.0 km) than LDMs (178.0 ± 134.4 km). Migration speed was similar across populations and for pre‐ and post‐breeding migrations. LDMs used more stopover days than SDMs. We conclude that Wahlberg's eagles from different parts of Africa have adapted their migration to differences in timing of the breeding season, distance of travel, and resources in the landscapes encountered during migration.

GRIPE AVIÁRIA: CONSCIENTIZANDO A POPULAÇÃO.

Avian influenza outbreaks have already hit several countries and contact between domestic and migratory birds has been the source of many epidemic outbreaks, with high mortality rates in humans and animals. There is great concern about the spread to continents not yet affected, especially via migratory birds. Transmission occurs mainly through direct contact with infected birds, through saliva, feces, respiratory secretions and aerosols. Awareness-raising is therefore essential as a prophylactic measure. Therefore, the methodology of the work developed was a survey to analyze the population's knowledge of the disease. Based on the results, an informative video was produced and published. In this way, by being clear about the forms of transmission, the spread of avian influenza can be prevented and avoided.

Seroprevalence of avian metapneumovirus (aMPV) among pullet and layer hens in Northern Thailand.

Avian metapneumovirus (aMPV) poses a significant global threat to the respiratory and reproductive systems of poultry, yet its prevalence and impact in specific regions, such as northern Thailand, remain understudied. This study is the first comprehensive assessment of aMPV seroprevalence among layer hens in the region. By the application of Enzyme-Linked Immunosorbent Assay (ELISA), our findings reveal a high overall seroprevalence of 60.78%, with significantly higher rates among post-laying hens (70.87%) compared to pre-laying hens (47.02%). Regional variations were noted, Uttaradit province showing the highest seroprevalence at 74%. Factors such as overcrowded conditions and poor farm hygiene were implied as contributors to increased seropositivity. Comparison with global studies highlights aMPV's endemicity and emphasizes the need for targeted surveillance and biosecurity measures. Migratory birds were inferred as potential vectors, contributing to the spread of aMPV across different regions. This study provides crucial epidemiological data essential for optimizing vaccination strategies and enhancing disease management practices to safeguard poultry health and sustainable production in northern Thailand.

A drastic decline in avian diversity in and around the Bordoibam-Bilmukh Bird Sanctuary, Lakhimpur, Assam, India

Bordoibam-Bilmukh is a small wetland located at the boundary of the Dhemaji and Lakhimpur districts of Assam, India that provides shelter and breeding ground to many resident and migratory birds. A survey was conducted between October 2022 and March 2024 on the avian diversity of Bordoibam-Bilmukh Bird Sanctuary. A total of 47 bird species under 16 orders and 29 families were recorded during the survey. Order Passeriformes, recorded with the highest number of avian species (15). Among the families, the highest number of species (5) was recorded under Ardeidae. Out of all the species recorded, three species, viz., Brown Shrike, Citrine Wagtail, and White Wagtail were winter migratory; one species, the Lesser Kestrel, was summer migratory, and the remaining 43 were resident species. Besides, two species, viz., Lesser Adjutant and Greater Adjutant are listed as ‘Near Threatened’ species on the IUCN Red List. Comparing the avian diversity from 1997 to 2024, a decline in the number of avian species from 167 (as per the 1997 record) to 47 (as per the present study) has been observed in the sanctuary. Various anthropogenic activities such as habitat destruction and disturbance, hunting of birds, are the major causes of the decline of avian diversity. For future species diversity restoration in the sanctuary, these negative anthropogenic activities should be addressed immediately for conservation strategies.

High-resolution spatiotemporal forecasting of the European crane migration

In this paper we present three different models to forecast bird migration. They are species-specific individual-based models that operate on a high spatiotemporal resolution (kilometres, 15 min-hours), as an addition to radar-based migration forecast models that currently exist. The models vary in complexity, and use GPS-tracked location, flying direction and speed, and/or wind data to forecast migration speed and direction. Our aim is to quantitatively evaluate the forecasting performance and assess which metrics improve forecasts at different ranges. We test the models through cross-validation using GPS tracks of common cranes during spring and autumn migration. Our results show that recordings of flight speed and direction improve the accuracy of forecasts on the short range (<2 h). Adding wind data at flight altitude results in consistent improvements of the forecasts across the entire range, particularly in the predicted speed. Direction forecasts are less affected by adding wind data because cranes mostly compensate for wind drift during migration. Migration in spring is more difficult to forecast than in autumn, resulting in larger errors in flight speed and direction during spring. We further find that a combination of flight behaviours – thermal soaring, gliding, and flapping – complicates the forecasts by inducing variance in flight speed and direction. Fitting those behaviours into flight optimisation models proves to be challenging, and even results in significant biases in speed forecasts in spring. We conclude that flight speed is the most difficult parameter to forecast, whereas flight direction is the most critical for practical applications of these models. Such applications could e.g., be prevention of bird strikes in aviation or with wind turbines, and public engagement with bird migration.

The source and dissemination of ARGs in pristine environments: Elucidating the role of migratory birds in the Arctic

Antibiotic resistance genes (ARGs) are a class of emerging contaminants that significantly threaten public health. In this work, the profiles of ARGs and microbial communities in the soil, sediment, migratory bird, and local deer fecal samples collected from the Arctic were characterized using a metagenomic approach. The results retrieved the baseline profiles of ARGs and identified the role of migratory birds in disseminating ARGs in the Arctic. A total of 26 ARG types and 718 subtypes were determined, and 131 core ARGs were identified. All the samples were dominated by multidrug resistance genes, and some genes resistant to antibiotics commonly used in anthropogenic were also detected. Characterization of ARGs in bird fecal samples was significantly distinct from other media, with higher abundance, richness, and unique ARGs detected. Proteobacteria was the most predominant phylum in soil and fecal samples, while Thaumarchaeota was prevalent in sediment samples. Firmicutes harbored the majority of ARGs in all samples. The results of FEAST indicated that migratory birds were crucial allochthonous ARG sources in the Arctic. These significant findings shed light on the global spread of ARGs and should facilitate efforts to map baseline levels of ARGs before the era of antibiotics.

Differential responses to weather and land‐cover conditions explain spatial variation in winter abundance trends in a migratory bird of conservation concern

Abstract Effective conservation strategies for animal populations require knowledge of relationships between population dynamics and their environmental drivers. However, these processes often vary within animal populations, requiring site‐specific conservation planning. Given limited financial resources, identifying groups of sites with similar population dynamics can help practitioners efficiently implement conservation programs to larger areas. We evaluated spatial patterns and environmental drivers of wintering site trends in a migratory bird of conservation concern, the Greenland white‐fronted goose (Anser albifrons flavirostris). We used latent class analysis to identify trend patterns in 35 years of abundance data among 59 geographically discrete Greenland white‐fronted goose wintering sites. We developed a state‐space abundance model in a Bayesian framework to quantify the effects of weather and land‐cover conditions experienced throughout spring migration, summer breeding, autumn migration and wintering periods on variation in wintering site abundance. We identified two main patterns in Greenland white‐fronted goose abundance trends: northeastern wintering sites declined on average by 3% per year, while southwestern wintering sites declined on average by 14% per year. Differential responses to weather and habitat conditions likely explained variation among groups, as geese at southwestern wintering sites were more negatively affected by harsh weather conditions (e.g. low temperatures and high precipitation on breeding areas) and poor habitat conditions (i.e. low‐quality grasslands and croplands) on wintering areas. Future conservation efforts to improve the suitability and nutritional quality of agricultural areas, especially cereal croplands in autumn and early winter and grasslands in late winter and early spring, could potentially improve local habitat conditions, especially in the southwestern wintering sites where abundance declines were steepest. Synthesis and applications. We demonstrate the potential to delineate animal populations based on spatial patterns in population dynamics using long‐term abundance monitoring data, which are commonly the only available data for conservation practitioners. By grouping sites based on spatial patterns in local abundance trends, we can further test hypotheses about how these groups are differentially affected by changing environmental conditions. This information is important for informing efficient conservation planning over large areas when financial resources are limited.

Extreme-value modelling of migratory bird arrival dates: Insights from citizen science data

Abstract Citizen science mobilises many observers and gathers huge datasets but often without strict sampling protocols, resulting in observation biases due to heterogeneous sampling effort, which can lead to biased predictions. We develop a spatiotemporal Bayesian hierarchical model for bias-corrected estimation of arrival dates of the first migratory bird individuals at their breeding sites. Higher sampling effort could be correlated with earlier observed dates. We implement data fusion of two citizen-science datasets with fundamentally different protocols (BBS, eBird) and obtain posterior distributions of the latent process, which contains four spatial components endowed with Gaussian process priors: species niche; sampling effort; position and scale parameters of annual first arrival date. The data layer consists of four response variables: counts of observed eBird locations (Poisson); presence-absence at observed eBird locations (Binomial); BBS occurrence counts (Poisson); first arrival dates (Generalised Extreme-Value). We devise a Markov Chain Monte Carlo scheme and check by simulation that the latent process components are identifiable. We apply our model to several migratory bird species in the northeastern United States for 2001−2021 and find that the sampling effort significantly modulates the observed first arrival dates. We exploit this relationship to effectively bias-correct predictions of the true first arrivals.

Diversity and Antifungal Susceptibilities of Yeasts from Mangroves in Hong Kong, China-A One Health Aspect.

While mangrove ecosystems are rich in biodiversity, they are increasingly impacted by climate change and urban pollutants. The current study provides first insights into the emergence of potentially pathogenic yeasts in Hong Kong's mangroves. Sediment and water samples were collected from ten urban and rural mangroves sites. Initial CHROMagarTM Candida Plus screening, representing the first application of this differential medium for water and soil samples collected from a non-clinical environment, enabled the rapid, preliminary phenotypic identification of yeast isolates from mangroves. Subsequent molecular profiling (ITS and/or 28S nrDNA sequencing) and antifungal drug susceptibility tests were conducted to further elucidate yeast diversity and drug resistance. A diversity of yeasts, including 45 isolates of 18 distinct species across 13 genera/clades, was isolated from sediments and waters from Hong Kong mangroves. Molecular profiling revealed a dominance of the Candida/Lodderomyces clade (44.4%), a group of notorious opportunistic pathogens. The findings also reveal a rich biodiversity of non-Candida/Lodderomyces yeasts in mangroves, including the first reported presence of Apiotrichum domesticum and Crinitomyces flavificans. A potentially novel Yamadazyma species was also discovered. Remarkably, 14.3% of the ubiquitous Candida parapsilosis isolates displayed resistance to multiple antifungal drugs, suggesting that mangroves may be reservoirs of multi-drug resistance. Wildlife, especially migratory birds, may disseminate these hidden threats. With significant knowledge gaps regarding the environmental origins, drug resistance, and public health impacts of pathogenic yeasts, urgent surveillance is needed from a One Health perspective. This study provides an early warning that unrestrained urbanization can unleash resistant pathogens from coastal ecosystems globally. It underscores the necessity for enhanced surveillance studies and interdisciplinary collaboration between clinicians, ornithologists, and environmental microbiologists to effectively monitor and manage this environmental health risk, ensuring the maintenance of 'One Health'.

Role of migratory birds as a risk factor for the transmission of multidrug resistant Salmonella enterica and Escherichia coli to broiler poultry farms and its surrounding environment

Multidrug resistance (MDR) considered as global crisis facing poultry industry. Migratory birds play very important role in the dissemination of antimicrobial resistant pathogen during their fly way specially to poultry farms. Therefore, 750 samples from migratory birds and 300 samples from broiler chicken farms and its environment were collected during the winter seasons of five years (2019 to 2023). The samples were subjected to the isolation of Salmonella enterica and Escherichia coli with the detection of antimicrobial resistance (phenotypic and genotypic) with insight to the genetic similarity between the isolates from migratory birds and broiler chickens’ farms. Different members of Enterobacteriaceae were isolated; Salmonella enterica, Escherichia coli, Citrobacter, Enterobacter, Klebsiella, Proteus, Providencia, Serratia, Hafnia. 298 (28.4%) of S. enterica strains belonging to 27 serovars. S. Typhimurium, S. Kentucky, S. Enteritidis and S. Shangani were the common 4 serotypes between migratory birds and farms. Meanwhile, we found 489 (46.6%) isolates of E. coli belonging to 24 serogroups and O91, O128, O26, O125, O55, O103 and O159 were the common 7serogroups between migratory birds and farms samples. The majority of Salmonella (91.6%; 274 out of 298) and E. coli (92%; 450 out of 489) were MDR. The MDRI range of Salmonella and E. coli was 0.08- 1.The genetic similarity between the isolates of migratory birds and broiler chicken farms were detected by ERICPCR and hot map. This study suggests the continuous applications of surveillance programs for migratory birds and biosecurity measures in poultry farms.