Microbiological Methods Research Articles

Comprehensive assessment of the effectiveness of diagnosis and treatment of patients with chronic apical periodontitis based on microbiological and joulemetric research methods

Background. An increase in the number of patients with chronic apical periodontitis is becoming a global trend, which is mediated by several factors: the formation of foci of chronic infection, an increase in the number of various odontogenic complications leading to the loss of a causal tooth, a decrease in general resistance and the development of persistent sensitization of the body.The aim of the study was to evaluate the effectiveness of diagnostic measures based on a complex of microbiological and joulemetric methods in patients with chronic apical periodontitis.Materials and methods. 25 patients with the established diagnosis of «chronic apical periodontitis» were examined. Microbiological and joulemetric analyses of the root canal system were performed before and at the stages of treatment using the delayed obturation method, which provides for intra-channel administration of a preparation of highly dispersed calcium hydroxide.Results. The comprehensive analysis of the results of bacteriological and joulemetric studies of the contents of the root canal system in the examined patients at the diagnostic and treatment stages fully corresponded to the clinical picture of the course of this nosological form and reflected the dynamics (negative and positive) of the inflammatory process in the studied periapical region.Conclusions. The combined use of microbiological and joulemetric techniques increases the effectiveness of therapeutic and diagnostic measures in patients with chronic apical periodontitis, which in turn reduces the risk of possible complications and improves the effectiveness of immediate and long-term therapy results.

Results of a monocentric field study: value of histology compared to sonication method and conventional tissue culture in the diagnosis of periprosthetic joint infection (PJI).

To confirm the diagnosis of periprosthetic joint infection (PJI), the Infectious Diseases Society of America (IDSA) and the International Consensus Meeting (ICM) have defined criteria that include histology as a minor criterion and the sonication method only as an additional criterion. The aim of this monocentric, retrospective study was to investigate the value of histology and whether sonication leads to a more accurate diagnosis. All revision surgeries for knee and hip arthroplasty between 2017 and 2020 were included. With regard to microbiological diagnostic, conventional culture of periprosthetic biopsies and sonication of explant material were performed. In addition, histology and non-specific inflammatory markers (CRP, leukocytes) were recorded. A total of 78 patients with PJI and 62 aseptic controls were included. From both microbiological methods (conventional culture / sonication), Staphyloccus (S.) epidermidis and S. aureus were detected most frequently. However, compared to the conventional microbiology, a higher sensitivity was calculated for sonication, albeit with a lower specificity in relation to a PJI. In two logistic regression models for the significance of all diagnostic parameters in PJI, the AUC was 0.92 and 0.96 with histology in particular making the decisive contribution in both models (p < 0. 001, both models). Since histology showed the highest accuracy in the current study, its importance in the PJI criteria should be reevaluated. Sonication shows a high sensitivity for germ detection with a lower specificity and should only be used in combination with the conventional culture for microbiolgical diagnostics.

Exploring odontogenic brain abscesses: a comprehensive review.

Whether in neurology or dentistry, odontogenic brain abscess stands as an ailment demanding undivided attention. The onset of this disease is insidious, with a relatively low incidence rate but a markedly high fatality rate. Moreover, its symptoms lack specificity, easily leading to misdiagnosis, oversight, and treatment delays. Hence, clinicians should maintain heightened vigilance when faced with pathogenic bacteria of dental origin in patients. This paper encapsulates the latest research findings on the clinical manifestations and essential treatment points of odontogenic brain abscess. It may offer a crucial reference for prompt diagnosis and improved therapeutic approaches. Odontogenic brain abscess, an infection of the cerebral parenchyma, usually appears in immunocompromised patients with dental ailments or postdental surgeries. The main pathogenic microorganisms include Streptococcus intermedius, Fusobacterium nucleatum, Streptococcus anginosus, and Millerella. Given the undetectable and nonspecific symptoms in patients, the diagnostic process relies on microbiological methods. Therefore, clinicians should actively investigate and identify the pathogenic microorganisms of odontogenic brain abscess for early detection and selection of appropriate treatment regimens to avoid disease management delays.

MICROFLORA OF THE UROGENITAL TRACT IN ACUTE PURULENTINFLAMMATORY DISEASES OF THE URINARY SYSTEM AS A PREREQUISITE OF ABDOMINAL SEPSIS

The aim – to ascertain the etiological role of various taxonomic groups of autochthonousand allochthonous microorganisms in the origin of acute purulent- inflammatory diseasesof the urinary system as a prerequisite of abdominal sepsis.Materials and methods. The study covers 145 patients with acute purulent- inflammatorydiseases of the urinary system. When studying the microbiota of the urinary system,standard microbiological methods were used, the number of colony- forming units(CFU) was counted, determining the population level of each species or group of themicroorganisms, the obtained numerical values were converted into a decimal logarithm(lg CFU). The etiopathogenetic value of individual representatives of the microbiotawas assessed by the constancy index, frequency and significance indicators, as well asthe coefficient of quantitative dominance of each type of microorganisms, and otherindicators (Margalef index, Berger- Parker dominance index).Results. Acute purulent- inflammatory diseases of the urinary system are polyetiologicaldiseases caused by microorganisms belonging to different taxonomic groups. The leadingrole belongs to opportunistic Escherichia, to a lesser extent enteropathogenic E.coli,as well as conditionally pathogenic Staphylococci, in addition to that only in a small(13.48 %) number of patients it was not possible to isolate and identify the pathogens.Associations of pathogens were often encountered, which testifies to the need of developingan antimicrobial effect on etiological factors. Conclusions. Acute purulent- inflammatory diseases of the urinary system arecharacterized by polyetiological factors, a variety of pathogens with the dominant roleof Escherichia coli and Staphylococci. The identified pathogens create the potentialfor translocation and formation, under certain conditions, of abdominal sepsis in thiscontingent of patients.

A metagenomics-based workflow for the detection and genomic characterization of GBS in raw freshwater fish.

The need for a rapid and accurate food microbiological testing method is apparent for a timely and effective foodborne outbreak response. This is particularly relevant for emerging foodborne pathogens such as Group B Streptococcus (GBS) whose associated food safety risk might be undercharacterized. By using GBS in raw freshwater fish as a case example, this study describes the development of a metagenomics-based workflow for rapid food microbiological safety testing and surveillance. This study can inform as a working model for various foodborne pathogens in other complex food matrices, paving the way for future methodological development of metagenomics for food microbiological safety testing.

Utility of a multiplex pathogen detection system directly from respiratory specimens for treatment and diagnostic stewardship.

The availability of syndrome-based panels for various ailments has widened the scope of diagnostics in many clinical settings. These panels can detect a multitude of pathogens responsible for a particular condition, which can lead to a timely diagnosis and better treatment outcomes. In contrast to traditional identification methods based on pathogen growth on culture, syndrome-based panels offer a quicker diagnosis, which can be especially beneficial in situations requiring urgent care, such as intensive care units. One such panel is the Biofire Filmarray Pneumonia plus Panel (BFP), which we have compared against microbiological culture and identification. The lower respiratory samples from patients were tested with BFP, culture, and identification with culture considered the gold standard. The phenotypic antibiotic susceptibility results (Vitek 2) were compared with the antimicrobial resistance (AMR) genes detected in BFP. Statistical analysis was carried out using GraphPad 7.0 and MS Excel (Microsoft Inc.). The results showed a positive percent agreement of 100% and a negative percent agreement of 47.8% with an overall agreement of 76.72% compared to culture. BFP was better at identifying fastidious bacteria, and the agreement with culture was higher for high bacterial identification numbers (107 and 106). There was also a correlation between the number of pathogens detected and growth in culture. Carbapenemase genes were detected in around 80% of phenotypically resistant samples and correlated with in-house PCR 60% of the time. Hence, BFP results need to be interpreted with caution especially when multiple pathogens are detected. Similarly, the presence or absence of AMR genes should be used to guide the therapy while being watchful of unusual resistance or susceptibility. The cost constraints and low throughput call for patient selection criteria and prioritization in emergency or resource-limited conditions.IMPORTANCEApplication of syndrome-based panels in clinical microbiology is of huge support in infectious conditions requiring urgent interventions, such as pneumonia. Interpreting the results requires caution; hence, we have compared the results obtained from Biofire Filmarray Pneumonia plus Panel with standard microbiological methods.

Bacterial growth in patients with low back pain and Modic changes: protocol of a multicentre, case–control biopsy study

IntroductionBacterial infection and Modic changes (MCs) as causes of low back pain (LBP) are debated. Results diverged between two randomised controlled trials examining the effect of amoxicillin with and without...

Antibacterial activity of Hungarian varietal honeys against respiratory pathogens as a function of storage time

Today, antibiotic therapies that previously worked well against certain bacteria due to their natural sensitivity, are becoming less effective. Honey has been proven to inhibit the biofilm formation of some respiratory bacteria, however few data are available on how the storage time affects the antibacterial effect. The activity of black locust, goldenrod, linden and sunflower honeys from three consecutive years (2020, 2021, 2022) was analyzed in 2022 against Gram-negative (Haemophilus influenzae, H. parainfluenzae, Pseudomonas aeruginosa) and Gram-positive (Streptococcus pneumoniae) bacteria using in vitro microbiological methods. After determining the physicochemical parameters of honey, broth microdilution was applied to determine the minimum inhibitory concentration of each honey type against each bacterium, and crystal violet assay was used to test their antibiofilm effect. The possible mechanism of action was explored with membrane degradation test, while structural changes were illustrated with scanning electron microscopy. Honeys stored for one or two years were darker than fresh honeys, while older honeys had significantly lower antibacterial activity. The most remarkable inhibitory effect was exerted by linden and sunflower honeys, and P. aeruginosa proved to be the most resistant bacterium. Based on our results, honey intended for medicinal purposes should be used as fresh as possible during a treatment.

Proinflammatory cytokines IL-6, IL-1β, TNF-α in infective endocarditis

Aim. To study the features of macrophages in the tissues of resected valves in operated patients with infective endocarditis (IE), their significance and interaction with inflammatory markers to improve the effectiveness of IE diagnosis. Materials and methods. Prospectively the research included 25 adult patients with active IE (Duke criteria 2015) and 24 patients with heart defects without IE, hospitalized in a cardiosurgical hospital in Moscow (2021–2022). A standard laboratory and instrumental examination was carried out for the diagnosis of IE, including etiological diagnosis with microbiological and molecular biological methods, and echocardiographic examination of heart. Additionally, the neutrophil-to-lymphocyte ratio (NLR) was calculated. The study of macrophages was carried out in the tissues of resected valves with the determination of the expression of pro- and anti-inflammatory cytokine genes, macrophage markers (CD 68+) using real-time PCR. Results. Increased expression of proinflammatory cytokines IL-1β, TNF-α and IL-6 was revealed in the group of operated patients with IE with significant differences in IL-1β (CI [IQR] 0.00367 [0.00047–0.01553] vs 0.00018 [0.00012–0.00262]; p0.05) and IL-6 (CI [IQR] 0.00367 [0.00047–0.01553] vs 0.00018 [0.00012–0.00262]; p0.05) and IL-6 (CI [IQR] 0.00338 [0.00066–0.01674] vs 0.00054 [0.00044–0.00378]; p0.05). The expression of anti-inflammatory cytokines in valve tissues prevailed in the control group without significant differences from patients with IE. The macrophage marker CD 68+ was revealed in all examined patients with a significant quantitative predominance in the group of patients with IE. There were no differences in the expression of pro- and anti-inflammatory cytokines depending on the presence of embolic events, intracardiac complications, etiological affiliation to S. aureus, as well as hospital mortality and combined endpoint (death from all causes or recurrence of IE 6 months after surgery) in patients with IE with or without events. Cytokines IL-1β and IL-6 positively correlated with each other, with leukocytes and NLR. ROC analysis determined that IL-1β and NLR had the most favorable features for the diagnosis of IE [IL-1β AUC 0.816 (p=0.02), NLR AUC 0.807 (p=0.03)]. IL-6 did not show a diagnostic value in IE. The threshold value for IL-1β was 0.00029 (sensitivity 86.4%, specificity 60.0%, prognostic value of negative result 75.0% and positive 76.0%, AUC 0.761; p=0.008). Conclusion. The valve macrophages of patients with IE express elevated levels of proinflammatory cytokines IL-1β and IL-6, regardless of etiological affiliation or complicated course of IE. IL-1β has a high diagnostic value for determining the inflammatory activity in IE.

Involvement of the Bacillus SecYEG Pathway in Biosurfactant Production and Biofilm Formation.

With Bacillus species, about 30% of extracellular proteins are translocated through the cytoplasmic membrane, coordinated by the Sec translocase. This system mainly consists of the cytoplasmic ATPase SecA and the membrane-embedded SecYEG channel. The purpose of this work was to investigate the effects of the SecYEG export system on the production of industrial biomolecules, such as biosurfactants, proteases, amylases, and cellulases. Fifty-two isolates of Bacillus species were obtained from traditional fermented foods and then characterized using molecular microbiology methods. The isolates secreted exoenzymes that included cellulases, amylases, and proteases. We present evidence that a biosurfactant-like molecule requires the SecA ATPase and the SecYEG membrane channel for its secretion. In addition, we showed that biomolecules involved in biofilm formation required the SecYEG pathway. This work presents a novel seven-target fragment multiplex PCR assay capable of identification at the species level of Bacillus through a unique SecDF chromosomal gene. The bacterial membrane protein SecDF allowed the discrimination of Bacillus subtilis, B. licheniformis, B. amyloliquefaciens, and B. sonorensis. SecA was able to interact with AprE, AmyE, and TasA. The Rose Bengal inhibitor of SecA crucially affected the interaction of AprE, AmyE, TapA, and TasA with recombinant Gst-SecA. The Rose Bengal prevented Bacillus species from secreting and producing proteases, cellulases, amylases, and biosurfactant-like molecules. It also inhibited the formation of biofilm cell communities. The data support, for the first time, that the SecYEG translocon mediates the secretion of a biosurfactant-like molecule.

Biosurfactant production potentials of microorganisms isolated from atmosphere of five petroleum stations at Tanke, Ilorin, Kwara State, Nigeria

Biosurfactants aid in bioremediation by improving the bioavailability of hydrocarbon contaminants. The objective of this work was to isolate, enumerate and identify bacteria and fungi for their biosurfactant production potential in the atmosphere of five petroleum stations at Tanke, Ilorin, Kwara State, Nigeria using appropriate, standard microbiological methods (haemolysis test, emulsification index test, drop collapse test and oil displacement test). Fourteen bacteria and ten fungi were isolated in this study. The bacterial isolates belong to the genus Bacillus, Corynebacterium, Micrococcus, Staphylococcus, Listeria, Clostridium. The fungal isolates are of the genus Neurospora, Curvularia, Aspergillus, Fusarium, Rhizopus, Cladosporium, Colletotrichum, Sclerotinia. The mean number of bacteria counted during the sampling ranged from 3.48±1.15*102 CFU to 4.82 ±1.69*102 CFU, with petrol station 4 having the highest bacteria count (2.41*102 CFU) and petrol station 3 having the lowest bacteria count (1.74*102 CFU). The mean fungal count ranged from 7±3.7 CFU to 8.6±4.7 *102 CFU, with petrol station 4 having the highest fungal count (4.3 *10 CFU) and petrol station 3 having the lowest fungal count (3.4*10 CFU). Bacillus species showed promise of biosurfactant production after screening. Aspergillus fumigatus was the most prevalent fungus isolated (24%) while Staphylococcus epidermidis was the most prevalent bacterium isolated (11%). Some of these organisms are known opportunistic pathogens therefore, improved ventilation and sanitation of the petrol stations should be carried out to reduce the microbial load in the air. Also, bacteria that produce biosurfactant can be isolated from air of gas stations.

Development of an expert system for assessing failures in oil and gas pipelines due to microbiologically influenced corrosion (MIC)

This study highlights the modeling of an expert system for the classification of internal microbiologically influenced corrosion (MIC) failures related to pipelines in the upstream oil and gas industry. The model is based on artificial neural networks (ANNs) and involves the participation of 15 MIC experts. Each expert evaluated a number of model case studies ranging from MIC- to non-MIC-driven upstream pipeline failures. The model accounts for variations in microbiological testing methods, microbiological sample types, and degradation morphology, among other variables. It also accounts for missing datasets, which is commonly the case in actual failure assessments. The outcome is an expert system model whose outputs are classes (classification ANN) which comprises MIC potential and data confidence. The performances of two approaches are contrasted in this study. One classifies the output in 5 classes, a 5-output classification (5OC) model; the other in 3 classes, a 3-output classification (3OC) model. The 5OC model had an accuracy of 62.0% while the simpler 3OC model had a better accuracy of 74.8%. This modelling exercise has demonstrated that knowledge from experts can be captured in a reasonably effective model to screen for possible MIC failures. It is hoped that this study not only may contribute to a better understanding of the prevalence of MIC in the oil and gas sector, but also may highlight the key areas necessary to improve the diagnosis of MIC failures in the future.

Difference in formation of a dental multi-species biofilm according to substratum direction

ObjectivesThe aim of this study was to investigate the difference in dental biofilm formation according to substratum direction, using an artificial biofilm model. MethodsA three-species biofilm, consisting of Streptococcus mutans, Streptococcus oralis, and Actinomyces naeslundii, was formed on saliva-coated hydroxyapatite (sHA) discs oriented in three directions: downward (the discs placed in the direction of gravity), vertical (the discs placed parallel to the direction of gravity), and upward (the discs placed in opposite direction of gravity). The biofilms at 22h and 46h of age were analyzed using microbiological and biochemical methods, fluorescence-based assays, and scanning electron microscopy to investigate difference in bacterial adhesion, early and mature biofilm formation. ResultsThe biofilms formed in the upward direction displayed the most complex structure, with the highest number and biovolume of bacteria, as well as the lowest pH conditions at both time points. The vertical and downward directions, however, had only scattered and small bacterial colonies. In the 22-h-old biofilms, the proportion of S. oralis was similar to, or slightly higher than, that of S. mutans in all directions of substratum surfaces. However, in the 46-h-old biofilms, S. mutans became the dominant bacteria in all directions, especially in the vertical and upward directions. ConclusionsThe direction of the substratum surface could impact the proportion of bacteria and cariogenic properties of the multi-species biofilm. Biofilms in an upward direction may exhibit a higher cariogenic potential, followed by those in the vertical and downward directions, which could be related to gravity.

Antibiotic-resistant Pattern of Isolated Bacteria from Selected Foods Sold at the Street Side Stalls and Restaurants of Tangail Municipality, Bangladesh

Objectives:: The goal of this investigation was to determine the microbial load with special emphasis on total viable count (TVC), total coliform count (TCC), total E. coli (TE.cC), and Staphylococcus spp. counts (TSC) in food samples collected from selected areas of Tangail municipality, Bangladesh. Methods:: An intensive study was carried out from December 2021 to March 2022 in the Tangail district of Bangladesh for investigation. A total of 5 types of food samples (15 from street side stalls and 15 from the selected restaurants; n= 30) were collected with a semi-structured-based questionnaire and tested by using different standard microbiological methods. Biochemical and antibiogram tests were performed to confirm the bacterial isolates and antibiotic-resistant patterns Results:: The results revealed that the values of TVC, TCC, TE.cC and TSC were found in the range of 2.5 ×106 - 8.9 ×108, 2.5×105 - 7.1×107, 1.9×103 - 5.6×105 and 5.0×105 - 4.6×106 CFU/ml in street vended foods and 5.5 ×105 - 9.5 ×106, 4.3×104 - 7.1×105, 0 to 3.9×104 and 3.1×104 - 6.6×105 CFU/ml in restaurant foods. The E. coli isolates displayed the highest resistance rates to amoxicillin (80%), whereas Staphylococcus spp. showed 90% resistance to ampicillin. Conclusion:: From the interview and observational assessment, it was found that the food service system was not well managed, and there was a lack of hygiene practices. Thus, the study identified the foods from selected areas as carriers of food-borne pathogens.

Evaluation of the presence of integrons, sul and smqnr genes and the prevalence of antibiotic resistance in Stenotrophomonas maltophilia clinical isolates

ObjectivesThe objective of this investigation was to examine the mechanisms associated with antibiotic resistance in Stenotrophomonas maltophilia clinical isolates retrieved from hospitalized patients undergoing open heart surgery in a Heart Center located in Tehran, Iran. Materials and methodsThis investigation encompassed a cross-sectional study of 60 S. maltophilia isolates, which were procured from diverse clinical specimens. Primary identification of the isolates was conducted through conventional microbiologic methods and subsequently verified by means of PCR primers. The E-test was utilized to establish the minimum inhibitory concentrations (MICs). PCR was then employed to ascertain the antibiotic resistance genes (sul1, sul2, Smqnr and intl1 - intl3). ResultsIn this study, a total of sixty clinical isolates of S. maltophilia were collected, with the majority of them being obtained from Intensive Care Units (ICU) (n = 54; 90%). The disk diffusion method yielded results indicating that 55% of the isolates were sensitive to minocycline, whereas 30% were intermediate and 15% were found to be resistant. Additionally, the MIC results revealed that the resistant rates of the isolates towards ceftazidime, cotrimoxazole and levofloxacin were 46.7%, 1.7% and 5%, respectively. The PCR amplification of three classes of integrons genes indicated that fifteen (25%) of the isolates carried int1, while no detection for intl2 and intl3 was reported. Furthermore, the prevalence of antibiotic resistance genes (sul1, sul2, and Smqnr) was identified in 15 (25%), 6 (10%), and 28 (46.7%) isolates, respectively. ConclusionThe reported increasing rate of antibiotic resistance and mobile genetic elements that could extend the resistance genes to other strains in the hospital, finally it could be an alarming issue for healthcare settings that need special attention to this strain and the epidemiological study on this issue.

Comparison of real-time PCR and nested PCR based on the HlyA gene for the detection of Listeria monocytogenes. Application on cheese samples.

The aim of the present study was to compare the performance of a nested polymerase chain reaction (nPCR) and a real-time PCR based on the amplification of the HlyA gene from Listeria monocytogenes using a plasmid DNA standard. Nested PCR was developed with an internal amplification control (IAC). Both techniques were validated in soft cheese samples by comparing their results with the results of the microbiological reference method ISO 11290-1:2017. Cheese samples artificially contaminated with 3.5 to 3,500 UFC/25g were processed by ISO 11290-1:2017 and, at several times of culture, DNA samples were extracted. All cheeses contaminated with L. monocytogenes were positive for the microbiological method 96h post contamination and for nPCR and real-time PCR 48h post contamination. At this time, the HlyA gene was amplified in all contaminated samples. Both molecular techniques showed the same sensitivity, 30 copies/reaction or 3.5 UFC/25g, when plasmid DNA standard or artificially contaminated cheese samples were used. Finally, eighty soft cheese samples obtained from local retail stores and tested by three methods were negative, indicating a 100% concordance in results. The development of an nPCR with IAC reinforces the reliability of the negative results without increasing the costs of the reaction. Besides, nPCR showed less sensitivity to the presence of inhibitory substances in the reaction. The use of one of these molecular techniques could be easily coupled to the microbiological method, serving as a screening method in the food industry for hygiene monitoring and early identification of contaminated foods.

Molecular characterization of carbapenemase and extended spectrum beta-lactamase producing Acinetobacter baumannii isolates causing surgical site infections in Ethiopia

BackgroundAcinetobacter baumannii is an opportunistic pathogen that can cause a variety of nosocomial infections in humans. This study aimed to molecularly characterize extended-spectrum beta-lactamase (ESBL) producing and carbapenem-resistant Acinetobacter species isolated from surgical site infections (SSI).MethodsA multicentre cross-sectional study was performed among SSI patients at four hospitals located in Northern, Southern, Southwest, and Central parts of Ethiopia. The isolates were identified by microbiological methods and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS). Antibiotic susceptibility was determined using disk diffusion. The presence of phenotypic ESBL and carbapenemase production was detected by employing standard microbiological tests, including combined disk diffusion (CDT). ESBL and carbapenem resistance determinants genes were studied by polymerase chain reaction (PCR) and sequencing.ResultsA total of 8.7% Acinetobacter species were identified from 493 culture-positive isolates out of 752 SSI wounds. The species identified by MALDI-TOF MS were 88.4% A. baumannii, 4.7% Acinetobacter pittii, 4.7% Acinetobacter soli, and 2.3% Acinetobacter lactucae. Of all isolates 93% were positive for ESBL enzymes according to the CDT. Using whole genome sequencing 62.8% of the A. baumannii harbored one or more beta-lactamase genes, and 46.5% harbored one or more carbapenemase producing genes. The distribution of beta-lactamases among Acinetobacter species by hospitals was 53.8%, 64.3%, 75%, and 75% at JUSH, TASH, DTCSH, and HUCSH respectively. Among ESBL genes, blaCTX−M alleles were detected in 21.4% of isolates; of these 83.3% were blaCTX−M−15. The predominant carbapenemase gene of blaOXA type was detected in 24 carbapenem-resistant A. baumannii followed by blaNDM alleles carried in 12 A. baumannii with blaNDM−1 as the most common.ConclusionsThe frequency of Acinetobacter species that produce metallobetalactamases (MBLs) and ESBLs that were found in this study is extremely scary and calls for strict infection prevention and control procedures in health facilities helps to set effective antibiotics stewardship.

Antibacterial Activity of Naturally Occurring Compounds from Selected Plants

The abstract presents a short survey of the study fact-finding the uncontaminated endeavor of normally occurring compounds derived from selected plants. This study investigated the potential of these compounds as uncontaminated powers in the field of unrefined brand-located drug discovery. The research complicated the distillation of bioactive compounds from a variety of plant beginnings famous for their curative properties. Therefore, these compounds were assigned to decontaminating assays against a range of bacterial strains by exploiting standard microbiological methods. The results revealed meaningful decontaminating activity of various compounds, signifying their potential as open opportunities for fighting bacterial contamination. Furthermore, this study delves into the systems latent the noticed completely clean belongings, peeling light on the biochemical pathways afflicted by these easily occurring compounds. This mechanistic intuitiveness embodies our understanding of the fashion of operation of compounds, which is critical for the occurrence of mean uncontaminated therapies. Additionally, this study debates the potential requests of these everyday compounds in drug and healthcare enterprises. The uncontaminated endeavor explained by these compounds desires their application for further growth and optimization, concreting the habit for novel healing mediations in the battle against bacterial contamination

OCCURRENCE OF VIRULENCE GENES OF Staphylococcus aureus AND Escherichia coli IN VENDED FOODS IN SELECTED MOTOR-PARKS IN OBIO/AKPOR, RIVERS STATE

The study aimed at evaluating the microbiological safety of vended foods in selected motor parks in Obio/Akpor Local Government Area, Rivers State, Nigeria. Forty-eight samples obtained from four motor parks (Choba, Rumuokoro, Eliozu and Oil-mill Park) were analyzed using standard microbiological methods for total heterotrophic bacteria count, virulent and antibiotic resistant profiles of Staphylococcus aureus and Escherichia coli. Total heterotrophic bacteria count ranged from 4.60 to 8.39 log10CFU/g. A total of 10 (20.83%) samples were positive for S. aureus while 14 (29.17%) were positive for E. coli. Total staphylococcal and Escherichia coli counts ranged from 4.89 to 7.01 and 2.70 to 5.31 log10cfu/g, respectively. Both bacteria were 100% resistant to augmentin. The confirmed E. coli showed varying resistant to cefixime (50%), ceftazidime (42.86%), cefuroxim (14.29%) and ofloxacin (7.14%); while S. aureus also showed varying resistant to erythromycin (10.00%), ceftriaxone (90.00%), cloxacillin (100.00%) and gentamycin (0.00%) The confirmed E. coli produced the expected bands for the E. coli attaching and effusing (eaeA), aggregative adherence fimbriae (aggR) and antimicrobial sensitivity testing (astA) virulence genes while S. aureus did not produce the expected bands with staphylococcal enterotoxin A (sea) and staphylococcal enterotoxin B (seb) genes. The detection of virulence gene bearing E. coli and multiple antibiotic resistant E. coli and S. aureus portends danger for commuters who patronizes these foods, hence the need for urgent public health interventions.

Effects of Single and Co-infections of Proteus Mirabilis and Aeromonas Hydrophila on Baseline Hematological, Serological, and Histological Data in Cultured Clarias Gariepinus

Background and Aim Significant mortality and production disruptions in fish culture are brought on by diseases and parasites. The purpose of the current study was to collect baseline data on the effects of single and co-infections of Proteus mirabilis, and Aeromonas hydrophila in Clarias gariepinus. Materials and Methods One hundred and twenty sub-adults of C. gariepinus were divided into control, P. mirabilis, A. hydrophila, and co-infection groups (P. mirabilis X A. hydrophila). Standard methods were used to determine hematology, serology, and histology. Standard microbiology methods were used for microbial analysis. Results The single A. hydrophila-infected group had the highest mortality (60% versus 37%) in the co-infected and P. mirabilis groups. A marked decrease was observed in the RBC, hemoglobin, and Packed Cell Volume (PCV) of 2.9×1012/L, 32.8 g/L, and 33.5% in the co-infected fish, compared to the control with 3.6×1012/L, 35.8 g/L, and 41.0%, respectively. Alanine transaminase, alkaline phosphatase, and aspartate transaminase levels were significantly lower in the co-infected fish (13.8, 236.0, and 66.3, respectively) compared to the A. hydrophila-infected group. Creatinine and urea levels were, however, higher in the co-infected treatment. The kidneys and livers of the A. hydrophila and co-infected groups were more severely damaged than those of the P. mirabilis and control groups. Vacuolation and necrosis of hepatocytes led to the desquamation of tubular and glomerular epithelial cells in the livers and kidneys of infected fish. Fish infected with A. hydrophila had the highest bacterial load count. Conclusion It was concluded that an antagonistic association exists between A. hydrophila and P. mirabilis when they are co-infected.