Methane Sink Research Articles

The Effects of Model Insoluble Copper Compounds in a Sedimentary Environment on Denitrifying Anaerobic Methane Oxidation (DAMO) Enrichment

The contribution of denitrifying anaerobic methane oxidation (DAMO) as a methane sink across different habitats, especially those affected by anthropogenic activities, remains unclear. Mining and industrial and domestic use of metals/metal-containing compounds can all cause metal contamination in freshwater ecosystems. Precipitation of metal ions often limits their toxicity to local microorganisms, yet microbial activity may also cause the redissolution of various precipitates. In contrast to most other studies that apply soluble metal compounds, this study investigated the responses of enriched DAMO culture to model insoluble copper compounds, malachite and covellite, in simulated sedimentary environments. Copper ≤ 0.22 µm from covellite appeared to cause immediate inhibition in 10 h. Long-term tests (54 days) showed that apparent methane consumption was less impacted by various levels of malachite and covellite than soluble copper. However, the medium-/high-level malachite and covellite caused a 46.6–77.4% decline in denitrification and also induced significant death of the representative DAMO microorganisms. Some enriched species, such as Methylobacter tundripaludum, may have conducted DAMO or they may have oxidized methane aerobically using oxygen released by DAMO bacteria. Quantitative polymerase chain reaction analysis suggests that Candidatus Methanoperedens spp. were less affected by covellite as compared to malachite while Candidatus Methylomirabilis spp. responded similarly to the two compounds. Under the stress induced by copper, DAMO archaea, Planctomycetes spp. or Phenylobacterium spp. synthesized PHA/PHB-like compounds, rendering incomplete methane oxidation. Overall, the findings suggest that while DAMO activity may persist in ecosystems previously exposed to copper pollution, long-term methane abatement capability may be impaired due to a shift of the microbial community or the inhibition of representative DAMO microorganisms.

Vulnerability of Arctic-Boreal methane emissions to climate change

The rapid warming of the Arctic-Boreal region has led to the concern that large amounts of methane may be released to the atmosphere from its carbon-rich soils, as well as subsea permafrost, amplifying climate change. In this review, we assess the various sources and sinks of methane from northern high latitudes, in particular those that may be enhanced by permafrost thaw. The largest terrestrial sources of the Arctic-Boreal region are its numerous wetlands, lakes, rivers and streams. However, fires, geological seeps and glacial margins can be locally strong emitters. In addition, dry upland soils are an important sink of atmospheric methane. We estimate that the net emission of all these landforms and point sources may be as much as 48.7 [13.3–86.9] Tg CH4 yr−1. The Arctic Ocean is also a net source of methane to the atmosphere, in particular its shallow shelves, but we assess that the marine environment emits a fraction of what is released from the terrestrial domain: 4.9 [0.4–19.4] Tg CH4 yr−1. While it appears unlikely that emissions from the ocean surface to the atmosphere are increasing, now or in the foreseeable future, evidence points towards a modest increase from terrestrial sources over the past decades, in particular wetlands and possibly lakes. The influence of permafrost thaw on future methane emissions may be strongest through associated changes in the hydrology of the landscape rather than the availability of previously frozen carbon. Although high latitude methane sources are not yet acting as a strong climate feedback, they might play an increasingly important role in the net greenhouse gas balance of the Arctic-Boreal region with continued climate change.

Oxidation is a potentially significant methane sink in land-terminating glacial runoff

Globally, aquatic ecosystems are one of the largest but most uncertain sources of methane, a potent greenhouse gas. It is unclear how climate change will affect methane emissions, but recent work suggests that glacial systems, which are melting faster with climate change, may be an important source of methane to the atmosphere. Currently, studies quantifying glacial emissions are limited in number, and the role of methanotrophy, or microbial methane oxidizers, in reducing atmospheric emissions from source and receiving waters is not well known. Here we discuss three potential sites for methane oxidation that could mitigate emissions from glaciers into the atmosphere: under ice oxidation, oxidation within proglacial lakes, and oxidation within melt rivers. The research presented here increases the number of glacial sites with methane concentration data and is one of only a few studies to quantify the net microbial activity of methane production and oxidation in two types of land-terminating glacial runoff (lake and river). We find that oxidation in a glacial river may reduce atmospheric methane emissions from glacial melt by as much as 53%. Incorporating methane oxidation in estimates of glacial methane emissions may significantly reduce the estimated magnitude of this source in budgeting exercises.

Inventory of methane and nitrous oxide emissions from freshwater aquaculture in China

Aquaculture is a major emission source of atmospheric methane (CH4) and nitrous oxide (N2O). However, its contribution remains highly uncertain because the source has been neglected in global and national greenhouse gas inventories. Here, we present an inventory of CH4 and N2O fluxes from five freshwater aquaculture systems in China, which accounted for more than half of global freshwater aquaculture production during 2000-2020. We show that total CH4 and N2O emissions were 2.5 (0.6-4.2) Tg CH4 yr-1 and 18.3 (3.8-32.2) Gg N2O yr-1, respectively, with 75% coming from ponds and paddy fields. CH4 and N2O effluxes from freshwater aquaculture were 5 and 2 times higher than the average from other inland water bodies, respectively. Aquaculture accounts for half of the national inland water emissions, and outweighs the land soil methane sink. We suggest that tracking aquacultural emissions and their reduction through aerated systems could provide additional opportunity to reduce agricultural non-CO2 emissions without compromising food security.

Inverse modeling of 2010–2022 satellite observations shows that inundation of the wet tropics drove the 2020–2022 methane surge

Atmospheric methane concentrations rose rapidly over the past decade and surged in 2020-2022 but the causes have been unclear. We find from inverse analysis of GOSAT satellite observations that emissions from the wet tropics drove the 2010-2019 increase and the subsequent 2020-2022 surge, while emissions from northern mid-latitudes decreased. The 2020-2022 surge is principally contributed by emissions in Equatorial Asia (43%) and Africa (30%). Wetlands are the major drivers of the 2020-2022 emission increases in Africa and Equatorial Asia because of tropical inundation associated with La Niña conditions, consistent with trends in the GRACE terrestrial water storage data. In contrast, emissions from major anthropogenic emitters such as the United States, Russia, and China are relatively flat over 2010-2022. Concentrations of tropospheric OH (the main methane sink) show no long-term trend over 2010-2022 but a decrease over 2020-2022 that contributed to the methane surge.

Methane concentration in the heartwood of living trees in a cold temperate mountain forest: variation, transport and emission.

Forest soils are the largest terrestrial sink of methane (CH4), but CH4 produced in tree trunks by methanogenic archaea and emitted into the atmosphere can significantly offset CH4 oxidation in the soil. However, our mechanistic understanding of CH4 accumulation in tree trunks, in relation to CH4 emission from the trunk surface, is still limited. We characterized temporal variations in the molar fraction of CH4 in the heartwood of trees ([CH4]HW) of four different species in a mountain forest and addressed the relationship between [CH4]HW and emission from the surface of the trunk (${F}_{CH_4}$), in connection with the characteristics of the wood. [CH4]HW measurements were made monthly for 15 months using gas-porous tubes permanently inserted into the trunk. [CH4]HW were above ambient CH4 molar fraction for all trees, lower than 100p.p.m. for seven trees, higher for the nine other trees and greater than 200,000p.p.m. (>20%) for two of these nine trees. [CH4]HW varied monthly but were not primarily determined by trunk temperature. Heartwood diffusive resistance for CH4 was variable between trees, not only due to heartwood characteristics but probably also related to source location. ${F}_{CH_4}$were weakly correlated with [CH4]HW measured a few days after. The resulting apparent diffusion coefficient was also variable between trees suggesting variations in the size and location of the CH4 production sites as well as resistance to gas transport within the trunk. Our results highlight the challenges that must be overcome before CH4 emissions can be simulated at the tree level.

Chemolithoautotrophic bacteria flourish at dark water-ice interfaces of an emerged Arctic cold seep.

Below their ice shells, icy moons may offer a source of chemical energy that could support microbial life in the absence of light. In the Arctic, past and present glacial retreat leads to isostatic uplift of sediments through which cold and methane-saturated groundwater travels. This fluid reaches the surface and freezes as hill-shaped icings during winter, producing dark ice-water interfaces above water ponds containing chemical energy sources. In one such system characterized by elevated methane concentrations - the Lagoon Pingo in Adventdalen, Svalbard (~10mg/L CH4, <0.3mg/L O2, -0.25°C, pH7.9), we studied amplicons of the bacterial and archaeal (microbial) 16S rRNA gene and transcripts in the water pond and overlaying ice. We show that active chemolithoautotrophic sulfur-oxidizing microorganisms (Sulfurimonas, Thiomicrorhabdus) dominated a niche at the bottom of the ice in contact with the anoxic water reservoir. There, the growing ice offers surfaces interfacing with water, and hosts favorable physico-chemical conditions for sulfide oxidation. Detection of anaerobic methanotrophs further suggests that the ice led to a steady-state dark and cold methane sink under the ice throughout winter, in two steps: first methane is oxidized to carbon dioxide and sulfates concomitantly reduced to sulfides by the activity of ANME-1a and SEEP-SRB1 consortia, in a second time energy from sulfides is used by sulfur- oxidizing microorganisms to fix carbon dioxide into organic carbon. Our results underline ice- covered and dark ecosystems as a hitherto overlooked oasis of microbial life and emphasize the need to study microbial communities in icy habitats.

Spatial variability of CH4 uptake in aerated soils of Yellow River Delta

The widespread occurrence of aerated plain soils underscores their significant role in the global soil methane (CH4) sink budget. However, plain soils are poorly characterized in terms of spatial variability of CH4 uptake and the relevant control. We investigated the intra- and inter-site spatial variability of CH4 uptake through flux measurements in intact soil cores from five non-wetland sites within the Yellow River Delta, each representing a distinct land use/cover type. Methane uptake rates were highest in undisturbed forest cores. The rates were very low, often falling below the detection limit, in cores from the other four sites. The significant correlation between CH4 uptake and bulk density across sites suggests the integrative role of bulk density for the effects of different disturbances (including salt stress and succession) on CH4 uptake. Methane uptake was heterogeneous at the within-site scale as indicated by large coefficients of variations (CVs). Soil texture variation manipulated the within-site pattern of CH4 uptake in the low-salinity sites. Salt affected the spatial variation of CH4 uptake only at high level of salinity. Neither Potter's nor Ridgwell's models effectively captured the within-site variation of CH4 uptake due to a texture-associated bias in the models. Establishing a quantitative relationship between CH4 uptake and clay content at the field scale in alluvial plain soils will facilitate the refinement of model parameters linked to texture and rectify biases in CH4 estimation. These results provide an insight for the biogeochemical control of CH4 uptake in alluvial plain soils and have important application for improving CH4 models.

Exploring modes of microbial interactions with implications for methane cycling.

Methanotrophs are the sole biological sink of methane. Volatile organic compounds (VOCs) produced by heterotrophic bacteria have been demonstrated to be a potential modulating factor of methane consumption. Here, we identify and disentangle the impact of the volatolome of heterotrophic bacteria on the methanotroph activity and proteome, using Methylomonas as model organism. Our study unambiguously shows how methanotrophy can be influenced by other organisms without direct physical contact. This influence is mediated by VOCs (e.g. dimethyl-polysulphides) or/and CO2 emitted during respiration, which can inhibit growth and methane uptake of the methanotroph, while other VOCs had a stimulating effect on methanotroph activity. Depending on whether the methanotroph was exposed to the volatolome of the heterotroph or to CO2, proteomics revealed differential protein expression patterns with the soluble methane monooxygenase being the most affected enzyme. The interaction between methanotrophs and heterotrophs can have strong positive or negative effects on methane consumption, depending on the species interacting with the methanotroph. We identified potential VOCs involved in the inhibition while positive effects may be triggered by CO2 released by heterotrophic respiration. Our experimental proof of methanotroph-heterotroph interactions clearly calls for detailed research into strategies on how to mitigate methane emissions.

Methane Emissions From Seabed to Atmosphere in Polar Oceans Revealed by Direct Methane Flux Measurements

AbstractSea‐air methane flux was measured directly by the eddy‐covariance method across approximately 60,000 km of Arctic and Antarctic cruises during a number of summers. The Arctic Ocean (north of 60°N, between 20°W and 50°E) and Southern Ocean (south of 50°S, between 70°W and 30°E) are found to be on‐shelf sources of atmospheric methane with mean sea‐air fluxes of 9.17 ± 2.91 (SEM (standard error of the mean)) μmol m−2 d−1 and 8.98 ± 0.91 μmol m−2 d−1, respectively. Off‐shelf, this region of the Arctic Ocean is found to be a source of methane (mean flux of 2.39 ± 0.68 μmol m−2 d−1), while this region of the Southern Ocean is found to be a methane sink (mean flux of −0.77 ± 0.37 μmol m−2 d−1). The highest fluxes observed are found around west Svalbard, South Georgia, and South Shetland Islands and Bransfield Strait; areas with evidence of the presence of methane flares emanating from the seabed. Hence, this study may provide evidence of direct emission of seabed methane to the atmosphere in both the Arctic and Antarctic. Comparing with previous studies, the results of this study may indicate an increase in sea‐air flux of methane in areas with seafloor seepage over timescales of several decades. As climate change exacerbates rising water temperatures, continued monitoring of methane release from polar oceans into the future is crucial.

Global atmospheric methane uptake by upland tree woody surfaces

Methane is an important greenhouse gas1, but the role of trees in the methane budget remains uncertain2. Although it has been shown that wetland and some upland trees can emit soil-derived methane at the stem base3,4, it has also been suggested that upland trees can serve as a net sink for atmospheric methane5,6. Here we examine in situ woody surface methane exchange of upland tropical, temperate and boreal forest trees. We find that methane uptake on woody surfaces, in particular at and above about 2 m above the forest floor, can dominate the net ecosystem contribution of trees, resulting in a net tree methane sink. Stable carbon isotope measurement of methane in woody surface chamber air and process-level investigations on extracted wood cores are consistent with methanotrophy, suggesting a microbially mediated drawdown of methane on and in tree woody surfaces and tissues. By applying terrestrial laser scanning-derived allometry to quantify global forest tree woody surface area, a preliminary first estimate suggests that trees may contribute 24.6–49.9 Tg of atmospheric methane uptake globally. Our findings indicate that the climate benefits of tropical and temperate forest protection and reforestation may be greater than previously assumed.

Carbon Dioxide Driven Methane Consumption in Soil Ecosystem

Soil is an important source and sink of greenhouse gas carbon dioxide (CO2) and methane (CH4). During CH4 consumption CO2 is produced as an end product. It is generally assumed that CO2 would inhibit CH4 consumption due to feedback inhibition. To test the effect of CO2 on methanotrophy, experiments were conducted in microcosms with different initial concentration of CO2 and CH4. Changes in CH4 consumption potential and abundance of pmoA gene copies in relation to CO2 concentration were estimated. In general, CH4 consumption ceased in the absence of CO2. In presence of CO2, rate of CH4 consumption (ng CH4 consumed g−1 soil d−1) varied from 0.283 to 0.481 at 1000 ppm of CH4 and 2.958 to 4.994 at 10,000 ppm of CH4. Abundance of methanotrophs (pmoA gene copies g−1 soil) ranged from 4.5 × 105 to 107 × 105 g−1 soil. A follow up experiment was carried out to evaluate CH4 consumption in the presence or absence of CO2, which proved that CO2 is essential for CH4 consumption. Study concludes that CO2 is a precursor molecule for CH4 consumption in soil ecosystem and methanotrophs are capable of mitigating both the greenhouse gases, CH4 and CO2.

Persistent activity of aerobic methane-oxidizing bacteria in anoxic lake waters due to metabolic versatility

Lacustrine methane emissions are strongly mitigated by aerobic methane-oxidizing bacteria (MOB) that are typically most active at the oxic-anoxic interface. Although oxygen is required by the MOB for the first step of methane oxidation, their occurrence in anoxic lake waters has raised the possibility that they are capable of oxidizing methane further anaerobically. Here, we investigate the activity and growth of MOB in Lake Zug, a permanently stratified freshwater lake. The rates of anaerobic methane oxidation in the anoxic hypolimnion reached up to 0.2 µM d−1. Single-cell nanoSIMS measurements, together with metagenomic and metatranscriptomic analyses, linked the measured rates to MOB of the order Methylococcales. Interestingly, their methane assimilation activity was similar under hypoxic and anoxic conditions. Our data suggest that these MOB use fermentation-based methanotrophy as well as denitrification under anoxic conditions, thus offering an explanation for their widespread presence in anoxic habitats such as stratified water columns. Thus, the methane sink capacity of anoxic basins may have been underestimated by not accounting for the anaerobic MOB activity.

Detection of Thermoacidophiles from Yellowstone Hot Spring

Aerobic methanotrophic bacteria maintain an unrivalled capability of utilizing methane as their sole carbon and energy source and have been retrieved from various environments. Phylogenetically, true aerobic thermoacidophilic methane oxidizers capable of growing below pH 3 have hitherto been associated only with the phylum Verrucomicrobia. In this report, the initial detection of a moderately thermoacidophilic Methylococcus-like Type Ib methanotroph of the class Gammaproteobacteria from an acidic thermal spring (50oC and pH 2.8) in the Yellowstone National Park, USA is presented. The isolate, termed YT-MC, was identified in a methane enrichment (55°C), which may represent a novel strain in the family Methylococcaceae Type Ib. The existence of this bacterium in the enrichments was demonstrated by the detection of pmoA gene, Southern blotting technique, phase-contrast, and electron microscopy. The coccus-typed cells showed tubular membranes instead of intracytoplasmic membrane systems (ICM). The soluble methane monooxygenase (sMMO) was not detected by PCR, indicating that the biotransformation of methane to methanol is oxidized by the particulate methane monooxygenase (pMMO). Moreover, YT-MC performs in a formerly undiscovered active biological methane sink in geothermal acidic environments, magnifying our knowledge of its ecological role in methane cycling, diversity, and coexistence of aerobic methanotrophy. Furthermore, the present study also reports the isolation and identification of an alphaproteobacterial heterotroph (strain YT-AC) and a verrucomicrobial methanotroph (strain YT-VM) from the same environment. Bangladesh J Microbiol, Volume 40, Number 2, December 2023, pp 86-94

Unveiling the impact of soil methane sink on atmospheric methane concentrations in 2020.

In 2020, anthropogenic methane (CH4) emissions decreased due to COVID-19 containment policies, but there was a substantial increase in the concentration of atmospheric CH4. Previous research suggested that this abnormal increase was linked to higher wetland CH4 emissions and a decrease in the atmospheric CH4 sink. However, the impact of changes in the soil CH4 sink remained unknown. To address this, we utilized a process-based model to quantify alterations in the soil CH4 sink of terrestrial ecosystems between 2019 and 2020. By implementing the model with various datasets, we consistently observed an increase in the global soil CH4 sink, reaching up to 0.35 ± 0.06 Tg in 2020 compared to 2019. This increase was primarily attributed to warmer soil temperatures in northern high latitudes. Our results emphasize the importance of considering the CH4 sink in terrestrial ecosystems, as neglecting this component can lead to an underestimation of both emission increases and reductions in atmospheric CH4 sink capacity. Furthermore, these findings highlight the potential role of increased soil warmth in terrestrial ecosystems in slowing the growth of CH4 concentrations in the atmosphere.

Evaluating the contribution of methanotrophy kinetics to uncertainty in the soil methane sink

The oxidation of atmospheric methane by soil microbes is an important natural sink for a potent greenhouse gas. However, estimates of the current and future soil methane sink are highly uncertain. Here we assessed the extent to which methanotrophy enzyme kinetics contribute to uncertainty in projections of the soil methane sink. We generated a comprehensive compilation of methanotrophy kinetic data from modern environments and assessed the patterns in kinetic parameters present in natural samples. Our compiled data enabled us to quantify the global soil methane sink through two idealized calculations comparing first-order and Michaelis–Menten models of kinetics. We show that these two kinetic models diverge only under high atmospheric CH4 scenarios, where first-order rate constants slightly overestimate the soil methane sink size, but produce similar predictions at modern atmospheric concentrations. Our compilation also shows that the kinetics of methanotrophy in natural soil samples is highly variable—both the V max (oxidation rate at saturation) and KM (half-saturation constant) in natural samples span over six orders of magnitude. However, accounting for the correlation we observe between V max and KM reduces the range of calculated uptake rates by as much as 96%. Additionally, our results indicate that variation in enzyme kinetics introduces a similar magnitude of variation in the calculated soil methane sink as temperature sensitivity. Systematic sampling of methanotroph kinetic parameters at multiple spatial scales should therefore be a key objective for closing the budget on the global soil methane sink.

Physiological basis for atmospheric methane oxidation and methanotrophic growth on air

Atmospheric methane oxidizing bacteria (atmMOB) constitute the sole biological sink for atmospheric methane. Still, the physiological basis allowing atmMOB to grow on air is not well understood. Here we assess the ability and strategies of seven methanotrophic species to grow with air as sole energy, carbon, and nitrogen source. Four species, including three outside the canonical atmMOB group USCα, enduringly oxidized atmospheric methane, carbon monoxide, and hydrogen during 12 months of growth on air. These four species exhibited distinct substrate preferences implying the existence of multiple metabolic strategies to grow on air. The estimated energy yields of the atmMOB were substantially lower than previously assumed necessary for cellular maintenance in atmMOB and other aerobic microorganisms. Moreover, the atmMOB also covered their nitrogen requirements from air. During growth on air, the atmMOB decreased investments in biosynthesis while increasing investments in trace gas oxidation. Furthermore, we confirm that a high apparent specific affinity for methane is a key characteristic of atmMOB. Our work shows that atmMOB grow on the trace concentrations of methane, carbon monoxide, and hydrogen present in air and outlines the metabolic strategies that enable atmMOB to mitigate greenhouse gases.

Opinion: A research roadmap for exploring atmospheric methane removal via iron salt aerosol

Abstract. The escalating climate crisis requires rapid action to reduce the concentrations of atmospheric greenhouse gases and lower global surface temperatures. Methane will play a critical role in near-term warming due to its high radiative forcing and short atmospheric lifetime. Methane emissions have accelerated in recent years, and there is significant risk and uncertainty associated with the future growth in natural emissions. The largest natural sink of methane occurs through oxidation reactions with atmospheric hydroxyl and chlorine radicals. Enhanced atmospheric oxidation could be a potential approach to remove atmospheric methane. One method proposes the addition of iron salt aerosol (ISA) to the atmosphere, mimicking a natural process proposed to occur when mineral dust mixes with chloride from sea spray to form iron chlorides, which are photolyzed by sunlight to produce chlorine radicals. Under the right conditions, lofting ISA into the atmosphere could potentially reduce atmospheric methane concentrations and lower global surface temperatures. Recognizing that potential atmospheric methane removal must only be considered an additive measure – in addition to, not replacing, crucial anthropogenic greenhouse gas emission reductions and carbon dioxide removal – roadmaps can be a valuable tool to organize and streamline interdisciplinary and multifaceted research to efficiently move towards understanding whether an approach may be viable and socially acceptable or if it is nonviable and further research should be deprioritized. Here we present a 5-year research roadmap to explore whether ISA enhancement of the chlorine radical sink could be a viable and socially acceptable atmospheric methane removal approach.

Methane mitigation via the nitrite-DAMO process induced by nitrate dosing in sewers

Nitrate or nitrite-dependent anaerobic methane oxidation (n-DAMO) is a microbial process that links carbon and nitrogen cycles as a methane sink in many natural environments. This study demonstrates, for the first time, that the nitrite-dependent anaerobic methane oxidation (nitrite-DAMO) process can be stimulated in sewer systems under continuous nitrate dosing for sulfide control. In a laboratory sewer system, continuous nitrate dosing not only achieved complete sulfide removal, but also significantly decreased dissolved methane concentration by ∼50 %. Independent batch tests confirmed the coupling of methane oxidation with nitrate and nitrite reduction, revealing similar methane oxidation rates of 3.68 ± 0.5 mg CH4 L−1 h−1 (with nitrate as electron acceptor) and 3.57 ± 0.4 mg CH4 L−1 h−1 (with nitrite as electron acceptor). Comprehensive microbial analysis unveiled the presence of a subgroup of the NC10 phylum, namely Candidatus Methylomirabilis (n-DAMO bacteria that couples nitrite reduction with methane oxidation), growing in sewer biofilms and surface sediments with relative abundances of 1.9 % and 1.6 %, respectively. In contrast, n-DAMO archaea that couple methane oxidation solely to nitrate reduction were not detected. Together these results indicated the successful enrichment of n-DAMO bacteria in sewerage systems, contributing to approx. 64 % of nitrite reduction and around 50 % of dissolved methane removal through the nitrite-DAMO process, as estimated by mass balance analysis. The occurrence of the nitrite-DAMO process in sewer systems opens a new path to sewer methane emissions.

Forest-floor respiration, N2O fluxes, and CH4 fluxes in a subalpine spruce forest: drivers and annual budgets

Abstract. Forest ecosystems play an important role in the global carbon (C) budget by sequestering a large fraction of anthropogenic carbon dioxide (CO2) emissions and by acting as important methane (CH4) sinks. The forest-floor greenhouse gas (GHG; CO2, CH4, and nitrous oxide (N2O)) flux, i.e., from soil and understory vegetation, is one of the major components to consider when determining the C or GHG budget of forests. Although winter fluxes are essential to determine the annual C budget, only very few studies have examined long-term, year-round forest-floor GHG fluxes. Thus, we aimed to (i) quantify seasonal and annual variations of forest-floor GHG fluxes; (ii) evaluate their drivers, including the effects of snow cover, timing, and amount of snowmelt; and (iii) calculate annual budgets of forest-floor GHG fluxes for a subalpine spruce forest in Switzerland. We measured GHG fluxes year-round during 4 years with four automatic large chambers at the ICOS Class 1 Ecosystem station Davos (CH-Dav). We applied random forest models to investigate environmental drivers and to gap-fill the flux time series. The forest floor emitted 2336 g CO2 m−2 yr−1 (average over 4 years). Annual and seasonal forest-floor respiration responded most strongly to soil temperature and snow depth. No response of forest-floor respiration to leaf area index or photosynthetic photon flux density was observed, suggesting a strong direct control of soil environmental factors and a weak, or even lacking, indirect control of canopy biology. Furthermore, the forest floor was a consistent CH4 sink (−0.71 g CH4 m−2 yr−1), with annual fluxes driven mainly by snow depth. Winter CO2 fluxes were less important for the CO2 budget (6.0 %–7.3 %), while winter CH4 fluxes contributed substantially to the annual CH4 budget (14.4 %–18.4 %). N2O fluxes were very low (0.007 g N2O m−2 yr−1), negligible for the forest-floor GHG budget at our site. In 2022, the warmest year on record with below-average precipitation at the Davos site, we observed a substantial increase in forest-floor respiration compared with other years. The mean forest-floor GHG budget indicated emissions of 2319 ± 200 g CO2 eq. m−2 yr−1 (mean ± standard deviation (SD) over all years), with respiration fluxes dominating and CH4 offsetting a very small proportion (0.8 %) of the CO2 emissions. Due to the relevance of snow cover, we recommend year-round measurements of GHG fluxes with high temporal resolution. In a future with increasing temperatures and less snow cover due to climate change, we expect increased forest-floor respiration at this subalpine site modulating the carbon sink of the forest ecosystem.