The large-scale misuse of fipronil insecticide can be a food safety issue. Therefore, the EU has fixed a maximum residue level of 5 µg kg−1 in egg expressed as the sum of both fipronil and its sulfone metabolite. On the other hand, their determination in egg samples is not an easy task due to the high proportion of lipids and proteins. Therefore, the development of new strategies to isolate fipronil and its metabolites from egg matrix interference remains a significant challenge and is central in food analysis. In this work, three clean-up strategies (EMR-lipid, HLB PRiME, and primary secondary amine (PSA)) based on either dispersive solid-phase extraction (dSPE) or SPE in pass-through mode were evaluated in combination with the QuEChERS extraction to determine fipronil and its metabolites in chicken eggs. All extracts were analyzed with ultra high performance liquid chromatography/tandem mass spectrometry (UHPLC-MS/MS). Several aspects, including laboratory throughput, matrix effect, limits of quantification, cleanliness of extracts, recovery, and repeatability, were taken into account to provide a comprehensive assessment of these clean-up strategies. LOQs ranged from 0.02 to 0.03 µg kg−1 were obtained in all cases, being lower than the maximum residue levels fixed by the current legislation. The samples cleaned up by EMR‐Lipid and PSA achieved the highest average recovery, obtaining recovery values between 95.3 and 99.3%, 91.3–96.7%, 85.1–89.3% for EMR‐Lipid, PSA, and HLB PRiME, respectively. The matrix effects were only negligible for all studied analytes in the case of EMR-lipid, achieving signal suppression ranged from −8 to −4%. Thus, EMR-lipid provided the best results due to its higher effectiveness in removing co-extracted species from the extract. Finally, different egg chicken samples were tested using the selected clean-up procedure to illustrate the method applicability.
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