Mechanism Of Decarbonylation Research Articles

Transitioning from Methanol to Olefins (MTO) toward a Tandem CO2 Hydrogenation Process: On the Role and Fate of Heteroatoms (Mg, Si) in MAPO-18 Zeotypes.

The tandem CO2 hydrogenation to hydrocarbons over mixed metal oxide/zeolite catalysts (OXZEO) is an efficient way of producing value-added hydrocarbons (platform chemicals and fuels) directly from CO2via methanol intermediate in a single reactor. In this contribution, two MAPO-18 zeotypes (M = Mg, Si) were tested and their performance was compared under methanol-to-olefins (MTO) conditions (350 °C, PCH3OH = 0.04 bar, 6.5 gCH3OH h-1 g-1), methanol/CO/H2 cofeed conditions (350 °C, PCH3OH/PCO/PH2 = 1:7.3:21.7 bar, 2.5 gCH3OH h-1 g-1), and tandem CO2 hydrogenation-to-olefin conditions (350 °C, PCO2/PH2 = 7.5:22.5 bar, 1.4-12.0 gMAPO-18 h molCO2-1). In the latter case, the zeotypes were mixed with a fixed amount of ZnO:ZrO2 catalyst, well-known for the conversion of CO2/H2 to methanol. Focus was set on the methanol conversion activity, product selectivity, and performance stability with time-on-stream. In situ and ex situ Fourier transform infrared spectroscopy (FT-IR), X-ray diffraction (XRD), solid-state nuclear magnetic resonance (NMR), sorption experiments, and ab initio molecular dynamics (AIMD) calculations were performed to correlate material performance with material characteristics. The catalytic tests demonstrated the better performance of MgAPO-18 versus SAPO-18 at MTO conditions, the much superior performance of MgAPO-18 under methanol/CO/H2 cofeeds, and yet the increasingly similar performance of the two materials under tandem conditions upon increasing the zeotype-to-oxide ratio in the tandem catalyst bed. In situ FT-IR measurements coupled with AIMD calculations revealed differences in the MTO initiation mechanism between the two materials. SAPO-18 promoted initial CO2 formation, indicative of a formaldehyde-based decarboxylation mechanism, while CO and ketene were the main constituents of the initiation pool in MgAPO-18, suggesting a decarbonylation mechanism. Under tandem CO2 hydrogenation conditions, the presence of high water concentrations and low methanol partial pressure in the reaction medium led to lower, and increasingly similar, methanol turnover frequencies for the zeotypes. Despite both MAPO-18 zeotypes showing signs of activity loss upon storage due to the interaction of the sites with ambient humidity, they presented a remarkable stability after reaching steady state under tandem reaction conditions and after steaming and regeneration cycles at high temperatures. Water adsorption experiments at room temperature confirmed this observation. The faster activity loss observed in the Mg version is assigned to its harder Mg2+-ion character and the higher concentration of CHA defects in the AEI structure, identified by solid-state NMR and XRD. The low stability of a MgAPO-34 zeotype (CHA structure) upon storage corroborated the relationship between CHA defects and instability.

The role of decarboxylation reactions during the initiation of the methanol-to-olefins process

The mechanism for direct CC bond formation during the initiation of the methanol-to-olefins (MTO) process is still under discussion. Carbon dioxide formation is often observed during initiation, but there are only few investigations into the role of decarboxylation. We investigate decarboxylation pathways in the H-SSZ-13 zeolite from methanol to olefins via direct carbon–carbon coupling. Additionally, the rate-determining steps were recomputed in the H-ZSM-5 and H-SAPO-34 zeolite. Gibbs free energy barriers were calculated using periodic density functional theory in combination with CCSD(T) calculations on cluster models. For H-SSZ-13, kinetic batch reactor simulations were performed. We found for H-SSZ-13 that pathways via decarboxylation reactions are equally likely as previously computed pathways including decarbonylation mechanisms (also known as ketene or CO pathway). Lactones formed from ketenes and formaldehyde were identified as the main intermediates. The decarboxylation mechanism has similar barriers in H-SSZ-13, H-ZSM-5, and H-SAPO-34, while the barriers for methylation and decarbonylation reactions are significantly lower in H-ZSM-5 and higher in H-SAPO-34. Decarboxylation reactions of lactones could explain experimentally detected carbon dioxide during the initial phase of the MTO process.

The Importance of Decarbonylation Mechanisms in the Atomic Layer Deposition of High-Quality Ru Films by Zero-Oxidation State Ru(DMBD)(CO)3.

Achieving facile nucleation of noble metal films through atomic layer deposition (ALD) is extremely challenging. To this end, η4 -2,3-dimethylbutadiene ruthenium(0) tricarbonyl (Ru(DMBD)(CO)3 ), a zero-valent complex, has recently been reported to achieve good nucleation by ALD at relatively low temperatures and mild reaction conditions. The authors study the growth mechanism of this precursor by in situ quartz-crystal microbalance and quadrupole mass spectrometry during Ru ALD, complemented by ex situ film characterization and kinetic modeling. These studies reveal that Ru(DMBD)(CO)3 produces high-quality Ru films with excellent nucleation properties. This results in smooth, coalesced films even at low film thicknesses, all important traits for device applications. However, Ru deposition follows a kinetically limited decarbonylation reaction scheme, akin to typical chemical vapor deposition processes, with a strong dependence on both temperature and reaction timescale. The non-self-limiting nature of the kinetically driven mechanism presents both challenges for ALD implementation and opportunities for process tuning. By surveying reports of similar precursors, it is suggested that the findings can be generalized to the broader class of zero-oxidation state carbonyl-based precursors used in thermal ALD, with insight into the design of effective saturation studies.

Influence of Cs Promoter on Ethanol Steam-Reforming Selectivity of Pt/m-ZrO2 Catalysts at Low Temperature

The decarboxylation pathway in ethanol steam reforming ultimately favors higher selectivity to hydrogen over the decarbonylation mechanism. The addition of an optimized amount of Cs to Pt/m-ZrO2 catalysts increases the basicity and promotes the decarboxylation route, converting ethanol to mainly H2, CO2, and CH4 at low temperature with virtually no decarbonylation being detected. This offers the potential to feed the product stream into a conventional methane steam reformer for the production of hydrogen with higher selectivity. DRIFTS and the temperature-programmed reaction of ethanol steam reforming, as well as fixed bed catalyst testing, revealed that the addition of just 2.9% Cs was able to stave off decarbonylation almost completely by attenuating the metallic function. This occurs with a decrease in ethanol conversion of just 16% relative to the undoped catalyst. In comparison with our previous work with Na, this amount is—on an equivalent atomic basis—just 28% of the amount of Na that is required to achieve the same effect. Thus, Cs is a much more efficient promoter than Na in facilitating decarboxylation.

Hydrotreating of Sunan Candlenut Oil using NiMo/ɣ-Al2O3 Catalyst for Renewable Diesel Production

Catalytic hydrotreating process based on NiMo/ɣ-Al2O3 has been conducted in this study using Sunan candlenut oil as the feedstock, in order to obtain renewable diesel products as well as conventional diesel. Hydrotreating process was performed with the variation of several operating conditions including pressure, temperature and weight ratio of catalyst to vegetable oils. Products obtained were then analyzed using Gas Chromatography (GC) and tested to obtain physical and chemical properties. Based on GC results, it was showed that the increase in operating pressure and temperature also increase the yield of hydrocarbon products in the range of diesel, with the highest yield of 30.95% at a pressure of 60 bar and temperature of 400°C. The conversion and selectivity were 33.48% and 95.72%, respectively, where the reaction route tends to the decarbonylation mechanism. However, changes in the weight ratio of catalyst to the vegetable oil did not affect the overall product yield. Analysis of physical and chemical properties of the product prior to distillation showed a decrease in the value of density, viscosity, iodine numbers and acid numbers are quite significant and closer specification commercial diesel oil.

Theoretical investigation of decarbonylation mechanism of furfural on Pd(111) and M/Pd(111)(M = Ru, Ni, Ir) surfaces

In this paper, decarbonylation of furfural on the surface of Pd(111) and M/Pd(111) (M=Ru,Ni,Ir) has been studied by DFT calculation. The adsorption energy, activation energy and reaction energy of decarbonylation of furfural on different metal surface were calculated and compared. The decarbonylation mechanism of furfural on the surfaces of Pd(111), Ni/Pd(111), Ru/Pd(111) and Ir/Pd(111) was discussed from two reaction routes and four elementary reactions. It is found that the energy of C4H3O*+H*→C4H4O is the highest, which is the rate determining step. The difference between the two reaction paths of the four catalysts shows that bimetallic catalyst can lower the activation energy of each reaction step more than single metal catalyst. Compared with the other three metals, on Ir/Pd(111) surface, all the reactions are exothermic with low activation energy. It is suggested that Ir/Pd(111) may be the best catalyst for decarbonylation of furfural.

Results supporting the concept of the oxidant-mediated protein amino acid conversion, a naturally occurring protein engineering process, in human cells.

Reactive oxygen species (ROS) play an important role in the development of various pathological conditions as well as aging. ROS oxidize DNA, proteins, lipids, and small molecules. Carbonylation is one mode of protein oxidation that occurs in response to the iron-catalyzed, hydrogen peroxide-dependent oxidation of amino acid side chains. Although carbonylated proteins are generally believed to be eliminated through degradation, we previously discovered the protein de-carbonylation mechanism, in which the formed carbonyl groups are chemically eliminated without proteins being degraded. Major amino acid residues that are susceptible to carbonylation include proline and arginine, both of which are oxidized to become glutamyl semialdehyde, which contains a carbonyl group. The further oxidation of glutamyl semialdehyde produces glutamic acid. Thus, we hypothesize that through the ROS-mediated formation of glutamyl semialdehyde, the proline, arginine, and glutamic acid residues within the protein structure can be converted to each other. Mass spectrometry provided results supporting that proline 45 (a well-conserved residue within the catalytic sequence) of the peroxiredoxin 6 molecule may be converted into glutamic acid in cultured human cells, opening up a revolutionizing concept that biological oxidation elicits the naturally occurring protein engineering process.

Results supporting the concept of the oxidant-mediated protein amino acid conversion, a naturally occurring protein engineering process, in human cells

Reactive oxygen species (ROS) play an important role in the development of various pathological conditions as well as aging. ROS oxidize DNA, proteins, lipids, and small molecules. Carbonylation is one mode of protein oxidation that occurs in response to the iron-catalyzed, hydrogen peroxide-dependent oxidation of amino acid side chains. Although carbonylated proteins are generally believed to be eliminated through degradation, we previously discovered the protein de-carbonylation mechanism, in which the formed carbonyl groups are chemically eliminated without proteins being degraded. Major amino acid residues that are susceptible to carbonylation include proline and arginine, both of which are oxidized to become glutamyl semialdehyde, which contains a carbonyl group. The further oxidation of glutamyl semialdehyde produces glutamic acid. Thus, we hypothesize that through the ROS-mediated formation of glutamyl semialdehyde, the proline, arginine, and glutamic acid residues within the protein structure can be converted to each other. Mass spectrometry provided results supporting that proline 45 (a well-conserved residue within the catalytic sequence) of the peroxiredoxin 6 molecule may be converted into glutamic acid in cultured human cells, opening up a revolutionizing concept that biological oxidation elicits the naturally occurring protein engineering process.

Computational mechanistic study of Ru-catalyzed CO2 reduction by pinacolborane revealing the σ-π coupling mechanism for CO2 decarbonylation.

It has been reported that RuH2(η2-H2)2(PCy3)2 (1) could mediate CO2 reduction by pinacolborane (HBpin), affording pinBOBpin (7), pinBOCH3 (8), pinBOCHO (9), pinBOCH2OBpin (10), and an unprecedented C2 species pinBOCH2OCHO (11), which meanwhile is converted to the Ru complexes, including the transient 3 (RuH(κ2-O2CH)(CO)(PCy3)2) and 5 (RuH{(μ-H)2Bpin}(CO)(PCy3)2), and the persistent 4 (RuH(κ2-O2CH)(CO)2(PCy3)2) and 6 (RuH2(CO)2(PCy3)2). To gain an insight into the catalysis, a DFT study was carried out. The study identified the key active catalyst to be the hydride 13 (RuH2(CO)(PCy3)2) and characterized the mechanisms leading to the experimentally observed species (3-11). By investigating the experimental system, we learned a new mechanism called σ-π coupling for CO2 decarbonylation. Under this mechanism, CO2 and HBpin first co-coordinate to the Ru center of 13, then σ-π coupling takes place, forming a B-O bond between CO2 and HBpin, Ru-H and Ru-C bonds, and simultaneously breaking the H-Bpin bond, followed by -OBpin group migration to the Ru center, completing the CO2 decarbonylation. An interesting feature regarding the Ru catalysis was the involvement of η1-Hη1-H → η2-H2 and η1-Hη1-Bpin → η2-HBpin reductions, which facilitated the oxidative H-Bpin addition or the coordination mode change of CO2 from η1-O to η2-CO for CO2 activation or σ-π coupling. The facilitation effects could be attributed to the reductions enhancing the electron donations from the Ru center to the antibonding orbitals of the activating bonds.

Insight into the mechanism of decarbonylation of methanol by ruthenium complexes; a deuterium labelling study.

In the reaction of [RuHClP3] (P = PPh3) with NaOMe in methanol, the product is [RuH2(CO)P3]. Short reaction times show that the final product is formed through [RuH4P3] as the major intermediate. Using NaOCD3 in CD3OD, the first formed product is [RuH4P'3] (P' is PPh3 partially deuterated in the ortho positions of the aromatic rings). Further reaction leads to a mixture of [RuHnD2-n(CO)P3] (n = 0, 22%; n = 1, 2 isomers each 28%; n = 2, 22%). Mechanistic aspects of both steps of the reaction are explored and, together with previously published calculations, they provide definitive mechanisms for both dehydrogenation and decarbonylation in these interesting systems.

The mechanistic investigations of photochemical carbonyl elimination and oxidative addition reactions of (η5-C5H5)M(CO)3, (M = Mn and Re) complexes.

We used computational methods to explore the mechanisms of the photochemical decarbonylation and the Si–H bond activation reaction of the group 7 organometallic compounds, η5-CpM(CO)3 (M = Mn and Re). The energies of both conical intersections and the intersystem crossings, which play a decisive role in these photo-activation reactions, are determined. Both intermediates and transition states in either the singlet or triplet states are also computed to furnish a mechanistic interpretation of the whole reaction paths. In the case of Mn, four types of reaction pathways (path I–path IV) that lead to the final insertion product are examined. The theoretical findings suggest that at the higher-energy band (295 nm) the singlet-state channel is predominant. As a result, the conical intersection mechanism (i.e., path I) prevails. However, at the lower-energy band (325 nm) the triplet-state channel occurs. In such a situation, the intersystem crossing mechanism (i.e., path IV) can successfully explain its CO-photodissociation mechanism. In the case of Re, on the other hand, the theoretical evidence reveals that only the singlet state-channel is superior. In consequence, the conical intersection mechanism (i.e., path V) can more effectively explain its photochemical decarbonylation mechanism. These theoretical analyses agree well with the available experimental observations.

Following the Molecular Mechanism of Decarbonylation of Unsaturated Cyclic Ketones Using Bonding Evolution Theory Coupled with NCI Analysis.

The synergetic use of bonding evolution theory (BET) and noncovalent interaction (NCI) analysis allows to obtain new insight into the bond breaking/forming processes and electron redistribution along the reaction path to understand the molecular mechanism of a reaction and recognize regions of strong and weak electron pairing. This viewpoint has been considered for cheletropic extrusion of CO from unsaturated cyclic ketones cyclohepta-3,5-dien-1-one CHD, cyclopent-3-en-1-one CPE, and bicyclo[2.2.1]hept-2-en-7-one BCH by using hybrid functional MPWB1K in conjugation with aug-cc-pVTZ basis set. Decarbonylation of CHD, CPE, and BCH are nonpolar cyclo-elimination reactions that are characterized by the sequence of turning points (TPs) as CHD, 1-11-C[CC]C†C†FFFTSC†C†C†-0:HT + CO; CPE, 1-8-CC[C†C†F†][FF][FF]FTS[C†C†]-0:BD + CO; and BCH, 1-8-CC[C†C†]F[FF]FTS[C†C†]-0:CD + CO. Breaking of C-C bond between the terminal carbon atoms of diene/triene framework and carbon atom of CO fragment starts at a distance of ca. 1.9-2.0 Å in the vicinity of the transition structure where the transition states are not reached yet. NCI analysis explains that the noncovalent interactions between two fragments appeared after the breaking of C-C bonds.

Evidence for the oxidant-mediated amino acid conversion, a naturally occurring protein engineering process, in human cells

Reactive oxygen species (ROS) play an important role in the development of various pathological conditions as well as aging. ROS oxidize DNA, proteins, lipids, and small molecules. Carbonylation is one mode of protein oxidation that occurs in response to the iron-catalyzed, hydrogen peroxide-dependent oxidation of amino acid side chains. Although carbonylated proteins are generally believed to be eliminated through proteasome-dependent degradation, we previously discovered the protein de-carbonylation mechanism, in which the formed carbonyl groups are chemically eliminated without proteins being degraded. Major amino acid residues that are susceptible to carbonylation include proline and arginine, both of which are oxidized to become glutamyl semialdehyde, which contains a carbonyl group. The further oxidation of glutamyl semialdehyde produces glutamic acid. Thus, we hypothesize that through the ROS-mediated formation of glutamyl semialdehyde, the proline, arginine, and glutamic acid residues within the protein structure are interchangeable. In support of this hypothesis, mass spectrometry demonstrated that proline 45 (a well-conserved residue within the catalytic sequence) of the peroxiredoxin 6 molecule can be converted into glutamic acid in cultured human cells, establishing a revolutionizing concept that biological oxidation elicits the naturally occurring protein engineering process.

Direct decarbonylation of furfural to furan: A density functional theory study on Pt-graphene

The catalytic mechanism of direct decarbonylation of furfural to furan on Pt graphene surface has been investigated by means of density functional theory (DFT) calculations. The main catalytic mechanism proposed in this study has six steps such as furfural adsorption, dissociation of H from adsorbed furfural, dissociation of carbon monoxide (molecularly) from adsorbed complex, furan formation and desorption of products. It has been concluded that the rate determining step for direct decarbonylation of furfural to furan is furan formation step and global activation barrier for this catalytic system is 82kJ/mol consisting of zero point energy and thermal energy corrections. Pt-graphene structure has an important role on the catalytic decarbonylation of furfural to furan without any other reactants. This accordingly points out that Pt doped graphene structure might be an encouraging catalyst for direct decarbonylation of furfural to furan molecule as a valuable chemical material.

Decarbonylation and hydrogenation reaction of furfural on Pd/Cu(111) surface

The adsorption behavior, decarbonylation and hydrogenation reaction mechanisms of furfural on best Pd/Cu(111) bimetallic model were investigated by density functional theory method. The results show that the initial adsorption at O3-Pd-top and O7-Cu-hcp site is most stable, with the adsorption energy of 73.4 kJ/mol. On the Pd/Cu(111) bimetallic surface, decarbonylation reaction of furfural is more likely to occur. The decarbonylation reaction of furfural has low activation energy. Each steps of decarbonylation mechanism is exothermic reaction. Furfural tends to form (C4H3O)CO by losing the H atom from the branch chain, and furan is then formed by decarbonylation and hydrogenation of the intermediate. Throughout the process, the hydrogenation of C4H3O is the rate-determining step with the highest activation energy barrier of 72.6 kJ/mol. For the hydrogenation of furfural, reacting with the first hydrogen is the rate-determining step, and it has the highest reaction energy barrier of 290.4 kJ/mol.

Deoxygenation of octanoic acid catalyzed by hollow spherical Ni/ZrO2

A series of Ni located on hollow spherical ZrO2 catalysts was prepared, and their catalytic performances for octanoic acid deoxygenation were investigated. The ZrO2 hollow spheres saturated by the water phase served as a nanoreactor that captured octanoic acid to react with Ni located inside a hollow spherical ZrO2. The complete conversion of octanoic acid deoxygenation could be achieved by migration of reactants and products in the water-oil biphasic phase. Oxygen vacancies on ZrO2 that resulted from calcination temperature improved the catalytic activity of deoxygenation. Propionic acid was taken as a model compound instead of octanoic acid in view of their same functional group (carboxyl), to study the mechanisms of hydrodeoxygenation, decarbonylation, and decarboxylation through density functional theory of calculations. The main reaction route was decarboxylation which was consistent with the experimental results.

Mechanism of Pd-Catalyzed Decarbonylation of Biomass-Derived Hydrocinnamic Acid to Styrene following Activation as an Anhydride

All elementary steps in the mechanism of Pd-catalyzed decarbonylation of hydrocinnamic acid through formation of a mixed anhydride species have been characterized through electronic structure calculations. Oxidative addition of the mixed anhydride to a singly or doubly ligated Pd is followed by decarbonylation, alkene formation, and catalyst regeneration. Metal-assisted deprotonation of the alkyl-Pd species by a coordinated carboxylate is predicted to be the rate-determining step; theory suggests that bulkier phosphine ligands (e.g., P(o-Tol)3) reduce the free energy of activation substantially, while variation of the auxiliary anhydride has little influence on efficiency.

ChemInform Abstract: Rh(I)‐Catalyzed Decarbonylation Synthesis of Carbazoles via C—N Cleavage.

Abstract A one-pot Rh(I)-catalyzed synthesis of 9-H carbazoles via C–N bond cleavage by activation of aldehyde C–H bonds is reported. This protocol offers good yields and tolerates a broad range of functional groups. Based on the extensive control experiments, we propose a plausible decarbonylation mechanism.

Rh(I)-catalyzed decarbonylation synthesis of carbazoles via C–N cleavage

A one-pot Rh(I)-catalyzed synthesis of 9-H carbazoles via C–N bond cleavage by activation of aldehyde C–H bonds is reported. This protocol offers good yields and tolerates a broad range of functional groups. Based on the extensive control experiments, we propose a plausible decarbonylation mechanism.

Theoretical investigation of the decarboxylation and decarbonylation mechanism of propanoic acid over a Ru(0 0 0 1) model surface

The hydrodeoxygenation of organic acids is often found to be a rate-controlling process during upgrading of biomass feedstocks into fuels. We developed a microkinetic model based on data obtained from density functional theory calculations for the decarboxylation and decarbonylation mechanisms of propanoic acid (CH3CH2COOH) over a Ru(0001) model surface. The model predicts that the decarbonylation mechanism is two orders of magnitude faster than the decarboxylation mechanism. The most favorable decarbonylation pathway proceeds via removal of the acid –OH group to produce propanoyl (CH3CH2CO) followed by C–CO bond scission of propanoyl to produce CH3CH2 and CO. Finally, CH3CH2 is hydrogenated to CH3CH3. Dehydrogenation reactions that have been observed to be important over Pd catalysts play no role over Ru(0001), and a sensitivity analysis indicates that removal of the acid –OH group is the rate-controlling step in the deoxygenation. Overall, our results suggest that to improve the Ru catalyst performance for the decarbonylation of organic acids, the free site coverage needs to be increased by, for example, adding a catalyst promoter that decreases the hydrogen and CO adsorption strength (without significantly affecting the C–OH bond scission rate), or by raising the reaction temperature and operating at relatively low CO and H2 partial pressures.